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Homology
BLAST of mRNA_D-mesarthrocarpus_Contig885.3.1 vs. uniprot
Match: D8LPM2_ECTSI (TPR repeat-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPM2_ECTSI) HSP 1 Score: 72.8 bits (177), Expect = 3.940e-11 Identity = 34/48 (70.83%), Postives = 42/48 (87.50%), Query Frame = 0
Query: 11 EAKVEDKITRARRDYHIGNLLQKRGQIEEAAKMYRSAVRLDPHHKSSH 58
+A +D TRARR YH+GNLLQKRG+++EAAKMYRSAV+LDP HK+SH
Sbjct: 32 QALEDDPSTRARRVYHMGNLLQKRGEVKEAAKMYRSAVKLDPAHKASH 79
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR019734 | Tetratricopeptide repeat | SMART | SM00028 | tpr_5 | coord: 55..88
e-value: 0.015
score: 24.5
coord: 157..190
e-value: 4.9E-4
score: 29.4
coord: 191..224
e-value: 1.6E-6
score: 37.7
coord: 89..122
e-value: 2.4
score: 17.2
coord: 123..156
e-value: 0.0077
score: 25.4
coord: 21..54
e-value: 0.021
score: 24.0 |
| IPR019734 | Tetratricopeptide repeat | PROSITE | PS50005 | TPR | coord: 21..54
score: 11.121901 |
| IPR019734 | Tetratricopeptide repeat | PROSITE | PS50005 | TPR | coord: 157..190
score: 11.269401 |
| IPR019734 | Tetratricopeptide repeat | PROSITE | PS50005 | TPR | coord: 89..122
score: 8.2014 |
| IPR019734 | Tetratricopeptide repeat | PROSITE | PS50005 | TPR | coord: 191..224
score: 10.1779 |
| IPR019734 | Tetratricopeptide repeat | PROSITE | PS50005 | TPR | coord: 123..156
score: 9.4404 |
| IPR019734 | Tetratricopeptide repeat | PROSITE | PS50005 | TPR | coord: 55..88
score: 9.9124 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | GENE3D | 1.25.40.10 | Tetratricopeptide repeat domain | coord: 19..94
e-value: 5.2E-19
score: 69.9 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | GENE3D | 1.25.40.10 | Tetratricopeptide repeat domain | coord: 160..248
e-value: 6.9E-21
score: 76.2 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | GENE3D | 1.25.40.10 | Tetratricopeptide repeat domain | coord: 95..159
e-value: 3.2E-15
score: 58.0 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | SUPERFAMILY | 48452 | TPR-like | coord: 21..226 |
| None | No IPR available | PFAM | PF13432 | TPR_16 | coord: 161..223
e-value: 2.2E-9
score: 37.7
coord: 28..87
e-value: 5.4E-10
score: 39.7
coord: 93..148
e-value: 6.2E-5
score: 23.5 |
| None | No IPR available | PANTHER | PTHR44216:SF3 | PROTEIN O-MANNOSYL-TRANSFERASE TMTC2 | coord: 25..121
coord: 126..221 |
| None | No IPR available | PANTHER | PTHR44216 | PROTEIN O-MANNOSYL-TRANSFERASE TMTC2 | coord: 25..121
coord: 126..221 |
| None | No IPR available | PROSITE | PS50293 | TPR_REGION | coord: 157..189
score: 8.687919 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_D-mesarthrocarpus_Contig885.3.1 ID=prot_D-mesarthrocarpus_Contig885.3.1|Name=mRNA_D-mesarthrocarpus_Contig885.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=248bp
GAGSKDGPPVEAKVEDKITRARRDYHIGNLLQKRGQIEEAAKMYRSAVRL
DPHHKSSHYNLGIALQELGELEESAKSYEAAIALAPHYMLAHYNLAYVRQ
DQGMLKDAAHHFRVAAELEPSDVDIHISLGNVLRQAGETGEAVRAYELAM
SLDENSRMAYYNLGGILQDNHEEEKAIECFKRTIKIDPNYADAHYNLGIC
LEIQGRFKEALLAYSNAHRLDPGTDDALLQANRVRMLIKGEGFEEEEE back to top
Annotated Terms
The following terms have been associated with this polypeptide:
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