prot_D-mesarthrocarpus_Contig8830.7.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig8830.7.1
Unique Nameprot_D-mesarthrocarpus_Contig8830.7.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length309
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig8830.7.1 vs. uniprot
Match: A0A6H5KYG2_9PHAE (APC1_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYG2_9PHAE)

HSP 1 Score: 139 bits (351), Expect = 3.490e-33
Identity = 108/293 (36.86%), Postives = 139/293 (47.44%), Query Frame = 0 
Query:   19 ANSIRPQLGVSLLWREPSPCPEPAAHIFCAWDQGLWAGGSRGAVGEGK-----RLLLCLVEPRSERLRALAMHNCFAFAASAPSLGGGSGHGGSGAHPSSSAASPVVEV--AFVTPCRSAVGLCAKGGG-GKGTKAGMGGLEGGPGVGEVATDILILSPAGELRFCRGGQAMTRVLPCIRLFGKELVQSASASGITPVVSQGRVQGSGSGAGPGATGELELLLESGAEVESLSDAVGGCFTLSLLDGRRWRLQVSLEPTSPLVAACLRAWDAMLSPGLADALRVDVVATGQAM 303
            A  IRP LG+SL+WRE    P PA H+FCA  +   A G   A G          LLC VE ++ RLRAL++             G                    VEV  AF  PCRSAVGLCA GGG G+GT          PG   ++ DIL+L   G L   RGG+ +TRV                     P V+         G   GA+        S  E ES+S+AVG CFTL+   G+R RL++SL+P+SPLV+ACL AWD++L   LA +LR D+ +    +
Sbjct:  564 AQPIRPHLGISLVWREAEGSPAPAQHVFCAEGE---ASGESAATGSASPSSSGSFLLCFVERQAARLRALSVSXXXXXXXXXXXXG--------------------VEVREAFTLPCRSAVGLCATGGGEGEGT----------PGA-AISADILVLGLDGSLTLYRGGRPVTRVA-------------------RPAVA---------GLSDGAS--------SNGEPESISEAVGSCFTLTTRGGQRRRLRLSLDPSSPLVSACLGAWDSLLGAPLAASLRADIASAAHCL 786
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig8830.7.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KYG2_9PHAE3.490e-3336.86APC1_C domain-containing protein n=2 Tax=Ectocarpu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig8830contigD-mesarthrocarpus_Contig8830:4418..5344 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig8830.7.1mRNA_D-mesarthrocarpus_Contig8830.7.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig8830 4418..5346 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig8830.7.1 ID=prot_D-mesarthrocarpus_Contig8830.7.1|Name=mRNA_D-mesarthrocarpus_Contig8830.7.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=309bp
GVDPAVLQGEEEEVGEGEANSIRPQLGVSLLWREPSPCPEPAAHIFCAWD
QGLWAGGSRGAVGEGKRLLLCLVEPRSERLRALAMHNCFAFAASAPSLGG
GSGHGGSGAHPSSSAASPVVEVAFVTPCRSAVGLCAKGGGGKGTKAGMGG
LEGGPGVGEVATDILILSPAGELRFCRGGQAMTRVLPCIRLFGKELVQSA
SASGITPVVSQGRVQGSGSGAGPGATGELELLLESGAEVESLSDAVGGCF
TLSLLDGRRWRLQVSLEPTSPLVAACLRAWDAMLSPGLADALRVDVVATG
QAMVTWARQ
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