prot_D-mesarthrocarpus_Contig8813.1.2 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig8813.1.2
Unique Nameprot_D-mesarthrocarpus_Contig8813.1.2
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length206
Homology
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig8813.1.2 vs. uniprot
Match: D8LDA0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDA0_ECTSI)

HSP 1 Score: 134 bits (336), Expect = 4.070e-34
Identity = 69/122 (56.56%), Postives = 83/122 (68.03%), Query Frame = 0 
Query:   23 FSLHDEGNGKCSTCYALDTEMVTVVGPGDAPSRRVCVSIGVVDQNLEVILYSRVRIPEGSEVVDGTFARLEGKLRAGWEEGIPLSVVRDLIKGNWSRGGVLVGWELKGDLNVLGFLEAAEQI 144
            FS H  G    +  YA+D EMVT+ GP D P+RR  VS+GVVD+ LE +LY RV +P G +V DG FAR++G L A WEEGIP S V D +  +   GGVLVGWEL  DLNVLGF +AA QI
Sbjct:   17 FSCH-RGIDAGARYYAVDIEMVTIEGPEDLPARRAMVSVGVVDERLETLLYGRVAVPRGCKVTDGVFARMQGGLLATWEEGIPASCVSDFLTRHVEEGGVLVGWELHSDLNVLGFEKAASQI 137
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig8813.1.2 vs. uniprot
Match: A0A835YNX9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNX9_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 2.490e-20
Identity = 56/138 (40.58%), Postives = 75/138 (54.35%), Query Frame = 0 
Query:    7 GARVEFQPLSGPSLSSFSLHDEGNGKC--STCYALDTEMVTV-VGPGDAPSRRVCVSIGVVDQNLEVILYSRVRIPEGSEVVDGTFARLEGKLRAGWEEGIPLSVVRDLIKGNWSRGGVLVGWELKGDLNVLGFLEAA 141
            G R+  + L G  L +  + D+       S C ALD EMV     P +   R V VSIGVVD  LE +LY+R+ +P   ++VD +FAR    L   W +GIP +  + L +    R G +VGW+L GDL VLGF  AA
Sbjct:    5 GLRISARRLPGADLENVEVTDDNEALLLDSRCIALDCEMVWANKQPAETTLRPVVVSIGVVDTELENLLYARIAVPPDVDIVDDSFARTSANLHPDWTKGIPHTTAQVLFRTMVQRAGTVVGWQLDGDLEVLGFEVAA 142
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig8813.1.2 vs. uniprot
Match: A0A8J6C368_DIALT (C3H1-type domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C368_DIALT)

HSP 1 Score: 70.1 bits (170), Expect = 1.210e-10
Identity = 48/139 (34.53%), Postives = 71/139 (51.08%), Query Frame = 0 
Query:    7 GARVEFQP-LSGPSLSSFS-------LHDEGNGKCSTCYALDTEMVTV-VGPG-DAPSRRVCVSIGVVDQNLEVILYSRVRIPEGSEVVDGTFARLEGKLRAGWEEGIPLSVVRDLIKGNWSRGGVLVGWELKGDLNVL 135
            G  +  QP + GPS +  S       +  +        +A+D E + V  G G DA    V VS+G+V + LE ILY+RVR+P   +V D  FAR  G L+  W  GI + +   L++     G +LVGW+++ DL  L
Sbjct:   46 GVSLGDQPAIDGPSTTPLSATGVPAPIDGQALNNGQRAFAVDCEFIQVRQGKGLDAREFSVTVSVGIVSEMLETILYARVRMPARCQVWDDAFARTVGALQPDWALGIRVDIACALVREFVDDGHILVGWQIEQDLRGL 184
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig8813.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LDA0_ECTSI4.070e-3456.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YNX9_9STRA2.490e-2040.58Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8J6C368_DIALT1.210e-1034.53C3H1-type domain-containing protein n=1 Tax=Diacro... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 33..159
e-value: 1.6E-6
score: 29.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig8813contigD-mesarthrocarpus_Contig8813:912..2539 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig8813.1.2mRNA_D-mesarthrocarpus_Contig8813.1.2Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig8813 912..2705 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig8813.1.2 ID=prot_D-mesarthrocarpus_Contig8813.1.2|Name=mRNA_D-mesarthrocarpus_Contig8813.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=206bp
MGDVAPGARVEFQPLSGPSLSSFSLHDEGNGKCSTCYALDTEMVTVVGPG
DAPSRRVCVSIGVVDQNLEVILYSRVRIPEGSEVVDGTFARLEGKLRAGW
EEGIPLSVVRDLIKGNWSRGGVLVGWELKGDLNVLGFLEAAEQIDDNVVQ
EDASLGSDGSANNCKSGWGSCDQGRETETGEALWVEDVLADTSGSAHPIW
CAEGGG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf