prot_D-mesarthrocarpus_Contig8694.2.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig8694.2.1
Unique Nameprot_D-mesarthrocarpus_Contig8694.2.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length124
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig8694.2.1 vs. uniprot
Match: D8LHH6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHH6_ECTSI)

HSP 1 Score: 52.0 bits (123), Expect = 3.680e-5
Identity = 35/82 (42.68%), Postives = 51/82 (62.20%), Query Frame = 0 
Query:   31 SGAGGSYEAAGVPEKIVQVVRDRGRKLAEAMTDARTMKPLSGQLLHVAVGKEVPLAVVFTLASKGGAEELQREWSVEKKLQL 112
            SG GG+  AAGV      ++++R  +L  A+   + +KPL  +L+ V  GK   +AVV TLAS G  EELQRE +VE+ +Q+
Sbjct: 1273 SGRGGA--AAGV-----SLMKERVLQLRNAIAREK-LKPLGNRLVQVPAGKRTRIAVVLTLASTGSQEELQRERTVERHIQV 1346
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig8694.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LHH6_ECTSI3.680e-542.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig8694contigD-mesarthrocarpus_Contig8694:2525..5087 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig8694.2.1mRNA_D-mesarthrocarpus_Contig8694.2.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig8694 2523..5087 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig8694.2.1 ID=prot_D-mesarthrocarpus_Contig8694.2.1|Name=mRNA_D-mesarthrocarpus_Contig8694.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=124bp
RGEGDRGWSPSLLSMAAAVVSAGGSLGGAFSGAGGSYEAAGVPEKIVQVV
RDRGRKLAEAMTDARTMKPLSGQLLHVAVGKEVPLAVVFTLASKGGAEEL
QREWSVEKKLQLHLLNVPLGSIPA
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