mRNA_D-mesarthrocarpus_Contig9992.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_D-mesarthrocarpus_Contig9992.1.1
Unique Name	mRNA_D-mesarthrocarpus_Contig9992.1.1
Type	mRNA
Organism	Discosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)

Homology

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BLAST of mRNA_D-mesarthrocarpus_Contig9992.1.1 vs. uniprot
Match: D7FVE5_ECTSI (Glutamine-dependent NAD(+) synthetase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVE5_ECTSI)

HSP 1 Score: 73.6 bits (179), Expect = 8.210e-14
Identity = 38/59 (64.41%), Postives = 48/59 (81.36%), Query Frame = 1

Query:    1 QVVTATINLEDVRAFRASRSSLMEQASDAKSLPKVVAPCGFSLTTPGADYLSMPPTLPR 177
            +V+TAT+NLEDVR++RAS SS MEQAS A+ LP V AP  F L TPGA+Y++ PPTLP+
Sbjct:  274 EVITATVNLEDVRSYRASVSSRMEQASGARRLPTVEAP-SFCLGTPGANYVTHPPTLPQ 331

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BLAST of mRNA_D-mesarthrocarpus_Contig9992.1.1 vs. uniprot
Match: A0A6H5JI49_9PHAE (NAD(+) synthase (glutamine-hydrolyzing) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI49_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 8.220e-14
Identity = 38/59 (64.41%), Postives = 48/59 (81.36%), Query Frame = 1

Query:    1 QVVTATINLEDVRAFRASRSSLMEQASDAKSLPKVVAPCGFSLTTPGADYLSMPPTLPR 177
            +V+TAT+NLEDVR++RAS SS MEQAS A+ LP V AP  F L TPGA+Y++ PPTLP+
Sbjct:  348 EVITATVNLEDVRSYRASVSSRMEQASGARRLPTVEAP-SFCLGTPGANYVTHPPTLPQ 405

The following BLAST results are available for this feature:

BLAST of mRNA_D-mesarthrocarpus_Contig9992.1.1 vs. uniprot

BLAST of mRNA_D-mesarthrocarpus_Contig9992.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2

ZOOM

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POSITION

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Match Name	E-value	Identity	Description
D7FVE5_ECTSI	8.210e-14	64.41	Glutamine-dependent NAD(+) synthetase n=1 Tax=Ecto...	[more]
A0A6H5JI49_9PHAE	8.220e-14	64.41	NAD(+) synthase (glutamine-hydrolyzing) n=1 Tax=Ec...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
D-mesarthrocarpus_Contig9992	contig	D-mesarthrocarpus_Contig9992:74..253 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	0
Start	0
Seed ortholog	2880.D7FVE5
PFAMs	CN_hydrolase,NAD_synthase
Model size	180
Max annot lvl	2759\|Eukaryota
KEGG rclass	RC00010,RC00100
KEGG ko	ko:K01950
KEGG Reaction	R00257
KEGG Pathway	ko00760,ko01100,map00760,map01100
KEGG Module	M00115
Hectar predicted targeting category	other localisation
GOs	GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0007275,GO:0007568,GO:0008150,GO:0008152,GO:0008340,GO:0008795,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0010259,GO:0016874,GO:0016879,GO:0016880,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0032501,GO:0032502,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0048856,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
Exons	1
Evalue	1.35e-14
EggNOG OGs	COG0171@1\|root,KOG2303@2759\|Eukaryota
EC	6.3.5.1
Description	NAD synthase (glutamine-hydrolyzing) activity
Cds size	180
COG category	H
BRITE	ko00000,ko00001,ko00002,ko01000

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680791148.409736-CDS-D-mesarthrocarpus_Contig9992:73..253	1680791148.409736-CDS-D-mesarthrocarpus_Contig9992:73..253	Discosporangium mesarthrocarpum MT17_79	CDS	D-mesarthrocarpus_Contig9992 74..253 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_D-mesarthrocarpus_Contig9992.1.1	prot_D-mesarthrocarpus_Contig9992.1.1	Discosporangium mesarthrocarpum MT17_79	polypeptide	D-mesarthrocarpus_Contig9992 74..253 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at D-mesarthrocarpus_Contig9992:74..253-
coding sequence from alignment at D-mesarthrocarpus_Contig9992:74..253-

protein sequence of mRNA_D-mesarthrocarpus_Contig9992.1.1

>prot_D-mesarthrocarpus_Contig9992.1.1 ID=prot_D-mesarthrocarpus_Contig9992.1.1|Name=mRNA_D-mesarthrocarpus_Contig9992.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=60bp
QVVTATINLEDVRAFRASRSSLMEQASDAKSLPKVVAPCGFSLTTPGADY
LSMPPTLPRP

mRNA from alignment at D-mesarthrocarpus_Contig9992:74..253-

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_D-mesarthrocarpus_Contig9992.1.1 ID=mRNA_D-mesarthrocarpus_Contig9992.1.1|Name=mRNA_D-mesarthrocarpus_Contig9992.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=180bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9992:74..253- (Discosporangium mesarthrocarpum MT17_79)
CAGGTCGTGACGGCCACCATCAACCTAGAGGACGTGCGTGCCTTCCGTGC
CTCCAGGAGCTCCCTGATGGAGCAGGCCAGCGATGCAAAAAGCCTCCCCA
AGGTGGTGGCGCCGTGCGGCTTCTCCCTGACCACCCCTGGGGCAGACTAC
CTGTCCATGCCCCCCACGCTGCCGAGGCCT

Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9992:74..253-

>mRNA_D-mesarthrocarpus_Contig9992.1.1 ID=mRNA_D-mesarthrocarpus_Contig9992.1.1|Name=mRNA_D-mesarthrocarpus_Contig9992.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=180bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9992:74..253- (Discosporangium mesarthrocarpum MT17_79)
CAGGTCGTGACGGCCACCATCAACCTAGAGGACGTGCGTGCCTTCCGTGC
CTCCAGGAGCTCCCTGATGGAGCAGGCCAGCGATGCAAAAAGCCTCCCCA
AGGTGGTGGCGCCGTGCGGCTTCTCCCTGACCACCCCTGGGGCAGACTAC
CTGTCCATGCCCCCCACGCTGCCGAGGCCT