mRNA_D-mesarthrocarpus_Contig9990.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9990.1.1 vs. uniprot
Match: D7FW08_ECTSI (Proteasome subunit alpha type n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW08_ECTSI) HSP 1 Score: 206 bits (524), Expect = 3.780e-65 Identity = 102/106 (96.23%), Postives = 105/106 (99.06%), Query Frame = 1 Query: 1 LAHRYDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKLDSHITLAFAGLTADARVLVDKARVECQSYRLTCEDAPSI 318 +A RYDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVK+DSHITLAFAGLTADARVLVDKAR+ECQSYRLTCEDAPSI Sbjct: 1 MASRYDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGLTADARVLVDKARLECQSYRLTCEDAPSI 106
BLAST of mRNA_D-mesarthrocarpus_Contig9990.1.1 vs. uniprot
Match: A0A6S9E6K7_HETAK (Proteasome subunit alpha type n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9E6K7_HETAK) HSP 1 Score: 182 bits (462), Expect = 9.250e-56 Identity = 86/102 (84.31%), Postives = 99/102 (97.06%), Query Frame = 1 Query: 13 YDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKLDSHITLAFAGLTADARVLVDKARVECQSYRLTCEDAPSI 318 YDRAITVFSPDGHLFQVEYA+EAVKRGSSVV ++GKDCV+LGVER++TAKLQD RT+RKI K+D+H+TLAFAGLTADARVLV+KAR+ECQSYRLTCEDAPS+ Sbjct: 3 YDRAITVFSPDGHLFQVEYAMEAVKRGSSVVGIRGKDCVILGVERKSTAKLQDSRTVRKICKVDNHLTLAFAGLTADARVLVNKARLECQSYRLTCEDAPSV 104
BLAST of mRNA_D-mesarthrocarpus_Contig9990.1.1 vs. uniprot
Match: A0A835Z7L7_9STRA (Proteasome subunit alpha type n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7L7_9STRA) HSP 1 Score: 180 bits (456), Expect = 8.430e-55 Identity = 89/106 (83.96%), Postives = 99/106 (93.40%), Query Frame = 1 Query: 1 LAHRYDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKLDSHITLAFAGLTADARVLVDKARVECQSYRLTCEDAPSI 318 +A YDRAITVFSPDGHLFQVEYAIEAVKRGSSVV V+ D +V+GVERRATAKLQDPRTIRKIVK+D+H+TLAFAGLTADARVL+DKAR+E QSYRLTCEDAPS+ Sbjct: 1 MAASYDRAITVFSPDGHLFQVEYAIEAVKRGSSVVGVRAADMLVVGVERRATAKLQDPRTIRKIVKVDAHLTLAFAGLTADARVLIDKARLEAQSYRLTCEDAPSL 106
BLAST of mRNA_D-mesarthrocarpus_Contig9990.1.1 vs. uniprot
Match: W7TRL4_9STRA (Proteasome subunit alpha type n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRL4_9STRA) HSP 1 Score: 179 bits (455), Expect = 1.190e-54 Identity = 88/106 (83.02%), Postives = 98/106 (92.45%), Query Frame = 1 Query: 1 LAHRYDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKLDSHITLAFAGLTADARVLVDKARVECQSYRLTCEDAPSI 318 +A RYDRAITVFSPDGHLFQVEYAIEAVKRGSS V V+GK V+LGVERRATAKLQDPRTI+KI K+D H+TLAFAGLTADARVLV+KAR+ECQSYRLT EDAP++ Sbjct: 1 MASRYDRAITVFSPDGHLFQVEYAIEAVKRGSSAVGVRGKSSVILGVERRATAKLQDPRTIKKICKIDEHVTLAFAGLTADARVLVNKARLECQSYRLTYEDAPTV 106
BLAST of mRNA_D-mesarthrocarpus_Contig9990.1.1 vs. uniprot
Match: A0A7S2EX89_TRICV (Proteasome subunit alpha type n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EX89_TRICV) HSP 1 Score: 176 bits (447), Expect = 2.240e-53 Identity = 87/102 (85.29%), Postives = 94/102 (92.16%), Query Frame = 1 Query: 13 YDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKLDSHITLAFAGLTADARVLVDKARVECQSYRLTCEDAPSI 318 YDRAITVFSPDGHLFQVEYA+EAV+RGS+ V V+GKDCVVL VERRA AKLQDPRTIRKIV +D TLAFAGLTADARVLV+KARVECQSYRLTCEDAPS+ Sbjct: 3 YDRAITVFSPDGHLFQVEYAMEAVRRGSTAVGVRGKDCVVLAVERRALAKLQDPRTIRKIVPVDERCTLAFAGLTADARVLVNKARVECQSYRLTCEDAPSV 104
BLAST of mRNA_D-mesarthrocarpus_Contig9990.1.1 vs. uniprot
Match: A0A024TP35_9STRA (Proteasome subunit alpha type n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A024TP35_9STRA) HSP 1 Score: 174 bits (440), Expect = 2.160e-52 Identity = 86/106 (81.13%), Postives = 96/106 (90.57%), Query Frame = 1 Query: 1 LAHRYDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKLDSHITLAFAGLTADARVLVDKARVECQSYRLTCEDAPSI 318 +A RYDRAITVFSPDGHLFQVEYA+EAVKRG+ VV V+G D VVL VER+ TAKLQDPRT+RKI K+D HITLAFAGLTADARVLV+KAR+ECQSYRLT EDAPS+ Sbjct: 1 MASRYDRAITVFSPDGHLFQVEYAMEAVKRGAVVVGVRGADVVVLAVERKETAKLQDPRTVRKICKVDDHITLAFAGLTADARVLVNKARLECQSYRLTVEDAPSV 106
BLAST of mRNA_D-mesarthrocarpus_Contig9990.1.1 vs. uniprot
Match: A0A3R6Z883_9STRA (Proteasome subunit alpha type n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A3R6Z883_9STRA) HSP 1 Score: 172 bits (435), Expect = 1.430e-51 Identity = 85/103 (82.52%), Postives = 94/103 (91.26%), Query Frame = 1 Query: 10 RYDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKLDSHITLAFAGLTADARVLVDKARVECQSYRLTCEDAPSI 318 RYDRAITVFSPDGHLFQVEYA+EAVKRG+ VV V+G D VVL VER+ TAKLQDPRT+RKI K+D HITLAFAGLTADARVLV+KAR+ECQSYRLT EDAPS+ Sbjct: 8 RYDRAITVFSPDGHLFQVEYAMEAVKRGAVVVGVRGADVVVLAVERKETAKLQDPRTVRKICKVDDHITLAFAGLTADARVLVNKARLECQSYRLTVEDAPSV 110
BLAST of mRNA_D-mesarthrocarpus_Contig9990.1.1 vs. uniprot
Match: A0A6U2BRH1_9STRA (Proteasome subunit alpha type n=3 Tax=Odontellaceae TaxID=2749909 RepID=A0A6U2BRH1_9STRA) HSP 1 Score: 171 bits (433), Expect = 2.550e-51 Identity = 84/102 (82.35%), Postives = 92/102 (90.20%), Query Frame = 1 Query: 13 YDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKLDSHITLAFAGLTADARVLVDKARVECQSYRLTCEDAPSI 318 YDRAITVFSPDGHLFQVEYA+EAV+RGS+ V V+GKDCVVL VERRA AKLQDPRTIRKIV +D TLAFAGLTADARVL++K RVE QSYRLTCEDAPS+ Sbjct: 3 YDRAITVFSPDGHLFQVEYAMEAVRRGSTAVGVRGKDCVVLAVERRALAKLQDPRTIRKIVPVDERCTLAFAGLTADARVLINKTRVEAQSYRLTCEDAPSV 104
BLAST of mRNA_D-mesarthrocarpus_Contig9990.1.1 vs. uniprot
Match: A0A1V9Z2W8_9STRA (Proteasome subunit alpha type n=5 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9Z2W8_9STRA) HSP 1 Score: 170 bits (431), Expect = 5.120e-51 Identity = 83/103 (80.58%), Postives = 94/103 (91.26%), Query Frame = 1 Query: 10 RYDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKLDSHITLAFAGLTADARVLVDKARVECQSYRLTCEDAPSI 318 RYDRAITVFSPDGHLFQVEYA+EAVK+G+ VV V+G D VVL VER+ TAKLQDPRT+RKI K+D HITLAFAGLTADARVL++KAR+ECQSYRLT EDAPS+ Sbjct: 9 RYDRAITVFSPDGHLFQVEYAMEAVKKGAIVVGVRGADVVVLAVERKETAKLQDPRTVRKICKVDDHITLAFAGLTADARVLINKARLECQSYRLTVEDAPSV 111
BLAST of mRNA_D-mesarthrocarpus_Contig9990.1.1 vs. uniprot
Match: A0A7R9UBV5_9STRA (Proteasome subunit alpha type n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UBV5_9STRA) HSP 1 Score: 171 bits (433), Expect = 5.310e-51 Identity = 84/103 (81.55%), Postives = 93/103 (90.29%), Query Frame = 1 Query: 10 RYDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKLDSHITLAFAGLTADARVLVDKARVECQSYRLTCEDAPSI 318 RYDRAITVFSPDGHLFQVEYAI AVK GS+VV V+G D VVLGVERRATAKL++ RTIRK+V+LD HIT AFAGLTADARVL KAR+ECQSYRLTC+DAPS+ Sbjct: 21 RYDRAITVFSPDGHLFQVEYAINAVKAGSAVVGVRGTDVVVLGVERRATAKLRETRTIRKVVQLDDHITAAFAGLTADARVLTTKARIECQSYRLTCDDAPSV 123 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9990.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig9990.1.1 >prot_D-mesarthrocarpus_Contig9990.1.1 ID=prot_D-mesarthrocarpus_Contig9990.1.1|Name=mRNA_D-mesarthrocarpus_Contig9990.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=113bp LAHRYDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRback to top mRNA from alignment at D-mesarthrocarpus_Contig9990:2000..4497+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig9990.1.1 ID=mRNA_D-mesarthrocarpus_Contig9990.1.1|Name=mRNA_D-mesarthrocarpus_Contig9990.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2498bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9990:2000..4497+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9990:2000..4497+ >mRNA_D-mesarthrocarpus_Contig9990.1.1 ID=mRNA_D-mesarthrocarpus_Contig9990.1.1|Name=mRNA_D-mesarthrocarpus_Contig9990.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=339bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9990:2000..4497+ (Discosporangium mesarthrocarpum MT17_79)back to top |