mRNA_D-mesarthrocarpus_Contig9986.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9986.1.1 vs. uniprot
Match: D8LBK9_ECTSI (OmpA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK9_ECTSI) HSP 1 Score: 81.6 bits (200), Expect = 6.340e-17 Identity = 38/46 (82.61%), Postives = 40/46 (86.96%), Query Frame = 1 Query: 1 PYASDSPGVHAVEIAAVDEAGNVDPEPAVWTWSVDTRPRTSMESAP 138 PYAS+ PG H V IAAVDEAGNVDPEPAVWTWSVD RPRTS+ SAP Sbjct: 357 PYASELPGSHTVAIAAVDEAGNVDPEPAVWTWSVDARPRTSLTSAP 402
BLAST of mRNA_D-mesarthrocarpus_Contig9986.1.1 vs. uniprot
Match: A0A6H5K857_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K857_9PHAE) HSP 1 Score: 81.6 bits (200), Expect = 6.340e-17 Identity = 38/46 (82.61%), Postives = 40/46 (86.96%), Query Frame = 1 Query: 1 PYASDSPGVHAVEIAAVDEAGNVDPEPAVWTWSVDTRPRTSMESAP 138 PYAS+ PG H V IAAVDEAGNVDPEPAVWTWSVD RPRTS+ SAP Sbjct: 26 PYASELPGSHTVAIAAVDEAGNVDPEPAVWTWSVDARPRTSLTSAP 71
BLAST of mRNA_D-mesarthrocarpus_Contig9986.1.1 vs. uniprot
Match: A0A0G2ZEH0_9DELT (Ig-like protein group 3 n=1 Tax=Archangium gephyra TaxID=48 RepID=A0A0G2ZEH0_9DELT) HSP 1 Score: 49.7 bits (117), Expect = 1.170e-5 Identity = 23/40 (57.50%), Postives = 31/40 (77.50%), Query Frame = 1 Query: 22 GVHAVEIAAVDEAGNVDPEPAVWTWSVD-TRPRTSMESAP 138 G H +E++AVD AGN+DP PAV+TW+VD T P T++ S P Sbjct: 857 GAHRLEVSAVDAAGNMDPTPAVYTWTVDLTPPDTTIVSGP 896
BLAST of mRNA_D-mesarthrocarpus_Contig9986.1.1 vs. uniprot
Match: A0A848LS83_9DELT (OmpA family protein n=1 Tax=Pyxidicoccus fallax TaxID=394095 RepID=A0A848LS83_9DELT) HSP 1 Score: 49.7 bits (117), Expect = 1.170e-5 Identity = 24/40 (60.00%), Postives = 29/40 (72.50%), Query Frame = 1 Query: 22 GVHAVEIAAVDEAGNVDPEPAVWTWSVDT-RPRTSMESAP 138 G H +E+ AVD AGNVDP PA +TW+VDT P TS+ S P Sbjct: 751 GSHTLEVRAVDAAGNVDPTPATYTWTVDTVAPDTSIVSGP 790
BLAST of mRNA_D-mesarthrocarpus_Contig9986.1.1 vs. uniprot
Match: A0A3M1MFK6_9CHLR (DUF11 domain-containing protein n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A3M1MFK6_9CHLR) HSP 1 Score: 49.3 bits (116), Expect = 1.610e-5 Identity = 22/45 (48.89%), Postives = 31/45 (68.89%), Query Frame = 1 Query: 4 YASDSPGVHAVEIAAVDEAGNVDPEPAVWTWSVDTRPRTSMESAP 138 Y + G+H ++ AVD AGN+DP PAV+TW+VD P T++ S P Sbjct: 158 YTGLAEGLHTFDVRAVDLAGNLDPTPAVYTWTVDLPPDTTILSTP 202
BLAST of mRNA_D-mesarthrocarpus_Contig9986.1.1 vs. uniprot
Match: UPI001F1BC852 (Ig-like domain-containing protein n=1 Tax=Myxococcus stipitatus TaxID=83455 RepID=UPI001F1BC852) HSP 1 Score: 49.3 bits (116), Expect = 1.610e-5 Identity = 25/46 (54.35%), Postives = 31/46 (67.39%), Query Frame = 1 Query: 4 YASDSPGVHAVEIAAVDEAGNVDPEPAVWTWSVDT-RPRTSMESAP 138 Y S S G H + + AVD AGNVDP PA +TW+VDT P T++ S P Sbjct: 669 YTSLSQGPHTLAVRAVDTAGNVDPTPATYTWTVDTVAPDTTIVSGP 714
BLAST of mRNA_D-mesarthrocarpus_Contig9986.1.1 vs. uniprot
Match: UPI001F3F2D0F (Ig-like domain-containing protein n=1 Tax=Myxococcus stipitatus TaxID=83455 RepID=UPI001F3F2D0F) HSP 1 Score: 48.9 bits (115), Expect = 2.200e-5 Identity = 24/42 (57.14%), Postives = 30/42 (71.43%), Query Frame = 1 Query: 16 SPGVHAVEIAAVDEAGNVDPEPAVWTWSVDT-RPRTSMESAP 138 S G H +E+ AVD AGNVDP PA + W+VDT RP T++ S P Sbjct: 793 SNGNHTLEVRAVDAAGNVDPTPAQYAWTVDTTRPETTIVSGP 834
BLAST of mRNA_D-mesarthrocarpus_Contig9986.1.1 vs. uniprot
Match: UPI001F0823DD (Ig-like domain-containing protein n=1 Tax=Pyxidicoccus trucidator TaxID=2709662 RepID=UPI001F0823DD) HSP 1 Score: 48.9 bits (115), Expect = 2.200e-5 Identity = 22/40 (55.00%), Postives = 31/40 (77.50%), Query Frame = 1 Query: 22 GVHAVEIAAVDEAGNVDPEPAVWTWSVDT-RPRTSMESAP 138 G H +++ AVD AGNVDP PAV+TW+VDT P T++++ P Sbjct: 880 GSHTLQVRAVDAAGNVDPTPAVYTWTVDTVPPDTNIDAGP 919
BLAST of mRNA_D-mesarthrocarpus_Contig9986.1.1 vs. uniprot
Match: UPI001F50C2B8 (Ig-like domain-containing protein n=2 Tax=Pyxidicoccus sp. SCPEA002 TaxID=2813578 RepID=UPI001F50C2B8) HSP 1 Score: 48.9 bits (115), Expect = 2.200e-5 Identity = 23/40 (57.50%), Postives = 29/40 (72.50%), Query Frame = 1 Query: 22 GVHAVEIAAVDEAGNVDPEPAVWTWSVDTRPR-TSMESAP 138 G H +E+ AVD AGNVDP PA +TW+VDT P T++ S P Sbjct: 1127 GSHTLEVRAVDSAGNVDPTPATYTWTVDTSPPDTTIVSGP 1166
BLAST of mRNA_D-mesarthrocarpus_Contig9986.1.1 vs. uniprot
Match: F8CLT6_MYXFH (OmpA domain-containing protein n=3 Tax=Myxococcaceae TaxID=31 RepID=F8CLT6_MYXFH) HSP 1 Score: 48.5 bits (114), Expect = 3.010e-5 Identity = 25/47 (53.19%), Postives = 30/47 (63.83%), Query Frame = 1 Query: 1 PYASDSPGVHAVEIAAVDEAGNVDPEPAVWTWSVD-TRPRTSMESAP 138 PY G H + + AVD AGNVDP PAV TW+VD T P T++ S P Sbjct: 849 PYTGLGDGEHTLAVYAVDAAGNVDPTPAVRTWTVDATAPETTIVSGP 895 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9986.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig9986.1.1 >prot_D-mesarthrocarpus_Contig9986.1.1 ID=prot_D-mesarthrocarpus_Contig9986.1.1|Name=mRNA_D-mesarthrocarpus_Contig9986.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=46bp PYASDSPGVHAVEIAAVDEAGNVDPEPAVWTWSVDTRPRTSMESAPback to top mRNA from alignment at D-mesarthrocarpus_Contig9986:2108..2245- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig9986.1.1 ID=mRNA_D-mesarthrocarpus_Contig9986.1.1|Name=mRNA_D-mesarthrocarpus_Contig9986.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=138bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9986:2108..2245- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9986:2108..2245- >mRNA_D-mesarthrocarpus_Contig9986.1.1 ID=mRNA_D-mesarthrocarpus_Contig9986.1.1|Name=mRNA_D-mesarthrocarpus_Contig9986.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=138bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9986:2108..2245- (Discosporangium mesarthrocarpum MT17_79)back to top |