mRNA_D-mesarthrocarpus_Contig9976.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9976.2.1 vs. uniprot
Match: D7FLK7_ECTSI (D-3-phosphoglycerate dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLK7_ECTSI) HSP 1 Score: 165 bits (417), Expect = 4.320e-45 Identity = 77/99 (77.78%), Postives = 90/99 (90.91%), Query Frame = 1
Query: 10 MTGTCFGTDIRIVDVDGLDIDFSPSGNLLLFNNPDSPGMLRAVADVLGKSGINIASFALGRVRTGGTAMSCLNLDTMCSDAILAEMRKIPDIRNVMQVT 306
MTGTCFGTD R+VDVDGL+IDF+PSG++L+FNNPDSPGMLRAVA +LG GINIASFALGRVRTGG AMSCLNLDT C++ +L E+RKIPDIRNV+Q +
Sbjct: 470 MTGTCFGTDTRVVDVDGLEIDFNPSGHMLMFNNPDSPGMLRAVAAILGDQGINIASFALGRVRTGGVAMSCLNLDTPCTEGMLEEIRKIPDIRNVVQAS 568
BLAST of mRNA_D-mesarthrocarpus_Contig9976.2.1 vs. uniprot
Match: A0A835YXH9_9STRA (D-3-phosphoglycerate dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXH9_9STRA) HSP 1 Score: 125 bits (315), Expect = 2.560e-31 Identity = 55/98 (56.12%), Postives = 76/98 (77.55%), Query Frame = 1
Query: 10 MTGTCFGTDIRIVDVDGLDIDFSPSGNLLLFNNPDSPGMLRAVADVLGKSGINIASFALGRVRTGGTAMSCLNLDTMCSDAILAEMRKIPDIRNVMQV 303
+ GTCFG ++R+ +D LDIDF P+GN++ NNPD+PGMLR V+ L + G+NIA+FALGRVR GGTAMSC+++D + ILA++R IP +RNV+ V
Sbjct: 457 VAGTCFGRELRVTSIDSLDIDFLPTGNMIFLNNPDTPGMLRQVSSALARGGVNIANFALGRVRQGGTAMSCISVDGPVPENILADLRAIPGVRNVIPV 554
BLAST of mRNA_D-mesarthrocarpus_Contig9976.2.1 vs. uniprot
Match: A0A7S2W8W5_9STRA (D-3-phosphoglycerate dehydrogenase n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W8W5_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 1.170e-20 Identity = 46/100 (46.00%), Postives = 67/100 (67.00%), Query Frame = 1
Query: 10 MTGTCF-GTDIRIVDVDGLDIDFSPSGNLLLFNNPDSPGMLRAVADVLGKSGINIASFALGRVRTGGTAMSCLNLDTMCSDAILAEMRKIPDIRNVMQVT 306
+TGT F G+++RIVDVDG +DF P GN L FNN D PG+++ VA++LGK GINI F LGR G A+ + D ++ ++A++ +P++ NV VT
Sbjct: 468 ITGTVFKGSELRIVDVDGYAVDFHPKGNCLFFNNEDRPGVVKNVAELLGKHGINIGDFTLGRKLAGDVALGIVATDQPVTNELVAQLETLPEVFNVAAVT 567
BLAST of mRNA_D-mesarthrocarpus_Contig9976.2.1 vs. uniprot
Match: A0A2V7V5K6_9BACT (ACT domain-containing protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V7V5K6_9BACT) HSP 1 Score: 84.7 bits (208), Expect = 5.820e-19 Identity = 42/96 (43.75%), Postives = 61/96 (63.54%), Query Frame = 1
Query: 4 LQMTGTCFGTD-IRIVDVDGLDIDFSPSGNLLLFNNPDSPGMLRAVADVLGKSGINIASFALGRVRTGGTAMSCLNLDTMCSDAILAEMRKIPDIR 288
L + GT FG + +R+VDVDG+++D P GN+LL N D+PG++ V +LGK GINIA LGR G A+ + +D A+L E+ +IP +R
Sbjct: 18 LSVAGTLFGRNHMRLVDVDGVEVDTIPQGNILLVKNEDTPGIVGKVGSLLGKHGINIARMGLGRKPGSGRAVMLIEIDNDAPPAVLEELPRIPGVR 113
BLAST of mRNA_D-mesarthrocarpus_Contig9976.2.1 vs. uniprot
Match: A0A1F2QXW6_9BACT (D-3-phosphoglycerate dehydrogenase n=1 Tax=Acidobacteria bacterium RBG_16_70_10 TaxID=1797174 RepID=A0A1F2QXW6_9BACT) HSP 1 Score: 85.9 bits (211), Expect = 2.570e-17 Identity = 43/96 (44.79%), Postives = 63/96 (65.62%), Query Frame = 1
Query: 4 LQMTGTCFGTD-IRIVDVDGLDIDFSPSGNLLLFNNPDSPGMLRAVADVLGKSGINIASFALGRVRTGGTAMSCLNLDTMCSDAILAEMRKIPDIR 288
LQ+ GT FG D +R+VDVDG+++D P GN+LL N D+PG++ V +LG GINIA LGR G A+ + +D+ +A+LAE+ ++ IR
Sbjct: 425 LQVAGTIFGRDHMRLVDVDGVEVDTIPRGNILLVKNEDTPGIVGRVGTLLGSHGINIARMGLGRKPGSGRAVMLIEVDSEVPEAVLAELPRVAGIR 520
BLAST of mRNA_D-mesarthrocarpus_Contig9976.2.1 vs. uniprot
Match: A0A2N6BBS9_9DELT (Phosphoglycerate dehydrogenase (Fragment) n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2N6BBS9_9DELT) HSP 1 Score: 75.9 bits (185), Expect = 1.560e-15 Identity = 36/99 (36.36%), Postives = 60/99 (60.61%), Query Frame = 1
Query: 10 MTGTCFG-TDIRIVDVDGLDIDFSPSGNLLLFNNPDSPGMLRAVADVLGKSGINIASFALGRVRTGGTAMSCLNLDTMCSDAILAEMRKIPDIRNVMQV 303
+ G FG + R+V++DG+DI+ P GN+L+ N D PG++ A+ LG+ GINI GR GG A++ +N+D+ DA L + + ++ N+ +V
Sbjct: 17 LAGAVFGKNEPRVVEIDGIDIEAMPEGNMLILWNNDRPGLVGAIGTTLGERGINIGQLQFGRSAPGGDAITVINVDSEPDDATLEALGALDNVNNLHKV 115
BLAST of mRNA_D-mesarthrocarpus_Contig9976.2.1 vs. uniprot
Match: A0A512AMP4_9SPHN (D-3-phosphoglycerate dehydrogenase n=37 Tax=Sphingomonadales TaxID=204457 RepID=A0A512AMP4_9SPHN) HSP 1 Score: 80.5 bits (197), Expect = 2.030e-15 Identity = 39/97 (40.21%), Postives = 64/97 (65.98%), Query Frame = 1
Query: 7 QMTGTCFGT-DIRIVDVDGLDIDFSPSGNLLLFNNPDSPGMLRAVADVLGKSGINIASFALGRVRTGGTAMSCLNLDTMCSDAILAEMRKIPDIRNV 294
+ GT FG D R+V++ G+ I+ +G++L N D+PG + ++ +LGK+GINI +F LGR GG A+ L++D+ ++A+LAE R +P +R V
Sbjct: 426 SVAGTLFGNGDPRLVEIFGIGIEADLAGDMLYIVNTDAPGFIGSIGTLLGKAGINIGTFHLGRREAGGEAVLLLSVDSPVTEAVLAEARTVPGVRTV 522
BLAST of mRNA_D-mesarthrocarpus_Contig9976.2.1 vs. uniprot
Match: UPI0019F5611A (Phosphoglycerate dehydrogenase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI0019F5611A) HSP 1 Score: 80.5 bits (197), Expect = 2.030e-15 Identity = 43/101 (42.57%), Postives = 61/101 (60.40%), Query Frame = 1
Query: 7 QMTGTCFG-TDIRIVDVDGLDIDFSPSGNLLLFNNPDSPGMLRAVADVLGKSGINIASFALGRVRTGGTAMSCLNLDTMCSDAILAEMRKIPDIRNVMQVT 306
+ GT F + RIV +DG+D++ P+GN+L N D PG++ V +LG + +NIASF LGR A+S +N+D SD LA +R + DI V QVT
Sbjct: 427 SVAGTLFHHKEPRIVQIDGIDVETIPTGNILFIYNEDKPGIIGNVGSLLGDANVNIASFQLGRDLDKKRAVSMVNVDEKVSDKTLAHLRDLADILEVKQVT 527
BLAST of mRNA_D-mesarthrocarpus_Contig9976.2.1 vs. uniprot
Match: A0A7X8A9M8_9BACT (D-3-phosphoglycerate dehydrogenase n=1 Tax=Nitrospiraceae bacterium TaxID=2026770 RepID=A0A7X8A9M8_9BACT) HSP 1 Score: 80.1 bits (196), Expect = 2.770e-15 Identity = 41/102 (40.20%), Postives = 60/102 (58.82%), Query Frame = 1
Query: 4 LQMTGTCFGT-DIRIVDVDGLDIDFSPSGNLLLFNNPDSPGMLRAVADVLGKSGINIASFALGRVRTGGTAMSCLNLDTMCSDAILAEMRKIPDIRNVMQVT 306
+ + GT F D RIV +D ++ P G +L+ N D PG++ + LG +GINIA GR GG A S +N+DT +DA+L ++RK+P+I V VT
Sbjct: 424 VSVEGTLFSKKDPRIVKIDHYTVEILPEGPMLIMENNDKPGVIGNIGATLGNAGINIARMHFGRESIGGKAFSVVNIDTPATDAVLDQIRKLPNILRVRAVT 525
BLAST of mRNA_D-mesarthrocarpus_Contig9976.2.1 vs. uniprot
Match: A0A2E0W425_9BACT (D-3-phosphoglycerate dehydrogenase n=1 Tax=Ignavibacteriae bacterium TaxID=2026749 RepID=A0A2E0W425_9BACT) HSP 1 Score: 79.3 bits (194), Expect = 5.170e-15 Identity = 38/98 (38.78%), Postives = 58/98 (59.18%), Query Frame = 1
Query: 10 MTGTCFGTDIRIVDVDGLDIDFSPSGNLLLFNNPDSPGMLRAVADVLGKSGINIASFALGRVRTGGTAMSCLNLDTMCSDAILAEMRKIPDIRNVMQV 303
+TGT +RIV +DG +++F P GNLL++NN D PG+L V+ VL + INIA LGR G A++ ++ D + + + K+ + NVM V
Sbjct: 426 VTGTVLDESLRIVRIDGFNLEFKPEGNLLIYNNLDKPGVLSKVSSVLSSNNINIAGLTLGRTGLGKEAITVISCDEEIDNKTIESVAKLQFVENVMVV 523 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9976.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig9976.2.1 >prot_D-mesarthrocarpus_Contig9976.2.1 ID=prot_D-mesarthrocarpus_Contig9976.2.1|Name=mRNA_D-mesarthrocarpus_Contig9976.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=106bp MTGTCFGTDIRIVDVDGLDIDFSPSGNLLLFNNPDSPGMLRAVADVLGKSback to top mRNA from alignment at D-mesarthrocarpus_Contig9976:651..1545- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig9976.2.1 ID=mRNA_D-mesarthrocarpus_Contig9976.2.1|Name=mRNA_D-mesarthrocarpus_Contig9976.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=895bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9976:651..1545- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9976:651..1545- >mRNA_D-mesarthrocarpus_Contig9976.2.1 ID=mRNA_D-mesarthrocarpus_Contig9976.2.1|Name=mRNA_D-mesarthrocarpus_Contig9976.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=318bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9976:651..1545- (Discosporangium mesarthrocarpum MT17_79)back to top |