mRNA_D-mesarthrocarpus_Contig9966.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9966.2.1 vs. uniprot
Match: D7G904_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G904_ECTSI) HSP 1 Score: 86.3 bits (212), Expect = 1.110e-17 Identity = 56/117 (47.86%), Postives = 71/117 (60.68%), Query Frame = 1 Query: 31 LYNDDLGVRDSFHYPYSGGDKPFEAHSLPPPRAPLLAGSLPPSRFLDDLPPLALGPQADDEFTTAYGSLGSAWDDSRDVVYAASCPATLGGELFGGSNGRGRAPARSRKASMLALEE 381
L+ D ++ F+ +GG SLPPP+APLLAGSLPPSRFLDDLPPL+LGPQAD+ F + G+L ++ +R +YA SCPA +G GR P SR SM L E
Sbjct: 70 LHTRDRSLQHDFNSGAAGGVNGI-VQSLPPPQAPLLAGSLPPSRFLDDLPPLSLGPQADNSFDSDCGALSTSLKANR--LYATSCPANIGAHF-------GRPPG-SRLQSMSVLAE 175 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9966.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig9966.2.1 >prot_D-mesarthrocarpus_Contig9966.2.1 ID=prot_D-mesarthrocarpus_Contig9966.2.1|Name=mRNA_D-mesarthrocarpus_Contig9966.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=144bp DREGDKGDLHLYNDDLGVRDSFHYPYSGGDKPFEAHSLPPPRAPLLAGSLback to top mRNA from alignment at D-mesarthrocarpus_Contig9966:315..1591- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig9966.2.1 ID=mRNA_D-mesarthrocarpus_Contig9966.2.1|Name=mRNA_D-mesarthrocarpus_Contig9966.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1277bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9966:315..1591- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9966:315..1591- >mRNA_D-mesarthrocarpus_Contig9966.2.1 ID=mRNA_D-mesarthrocarpus_Contig9966.2.1|Name=mRNA_D-mesarthrocarpus_Contig9966.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=432bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9966:315..1591- (Discosporangium mesarthrocarpum MT17_79)back to top |