mRNA_D-mesarthrocarpus_Contig996.6.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig996.6.1
Unique NamemRNA_D-mesarthrocarpus_Contig996.6.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig996.6.1 vs. uniprot
Match: A0A0A1UHH5_ENTIV (Protein serine/threonine kinase, putative n=1 Tax=Entamoeba invadens IP1 TaxID=370355 RepID=A0A0A1UHH5_ENTIV)

HSP 1 Score: 52.0 bits (123), Expect = 1.960e-6
Identity = 27/44 (61.36%), Postives = 32/44 (72.73%), Query Frame = 1 
Query:    7 QLEMRELIGEGSFGQVMEGTYFGKLVAIKKLKNSILPKVDMDEF 138
            +LE  + IGEGSFG V +GT+ GK VAIKKLKNS   K  +DEF
Sbjct: 2404 ELEETKKIGEGSFGIVFKGTFRGKTVAIKKLKNSNATKQAIDEF 2447
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BLAST of mRNA_D-mesarthrocarpus_Contig996.6.1 vs. uniprot
Match: L8H3N0_ACACA (Guanylate cyclase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H3N0_ACACA)

HSP 1 Score: 47.4 bits (111), Expect = 8.440e-5
Identity = 24/46 (52.17%), Postives = 30/46 (65.22%), Query Frame = 1 
Query:    4 NQLEMRELIGEGSFGQVMEGTYFGKLVAIKKLKNSILPKVDMDEFR 141
            N   M E IGEG++GQV+EG Y G+ VAIK+L NS L    M + R
Sbjct: 1205 NMCPMGERIGEGNYGQVLEGVYHGRKVAIKRLFNSRLDDEGMRKMR 1250
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig996.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A0A1UHH5_ENTIV1.960e-661.36Protein serine/threonine kinase, putative n=1 Tax=... [more]
L8H3N0_ACACA8.440e-552.17Guanylate cyclase n=1 Tax=Acanthamoeba castellanii... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig996contigD-mesarthrocarpus_Contig996:17539..17682 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog46681.XP_001734988.1
PFAMsPkinase_Tyr
Model size144
Max annot lvl554915|Amoebozoa
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
Evalue3.55e-05
EggNOG OGsCOG0515@1|root,KOG0192@2759|Eukaryota,3XDJB@554915|Amoebozoa
DescriptionEGF domain, unclasssified subfamily
Cds size144
COG categoryT
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791145.7529914-CDS-D-mesarthrocarpus_Contig996:17538..176821680791145.7529914-CDS-D-mesarthrocarpus_Contig996:17538..17682Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig996 17539..17682 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig996.6.1prot_D-mesarthrocarpus_Contig996.6.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig996 17539..17682 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig996.6.1

>prot_D-mesarthrocarpus_Contig996.6.1 ID=prot_D-mesarthrocarpus_Contig996.6.1|Name=mRNA_D-mesarthrocarpus_Contig996.6.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=48bp
MNQLEMRELIGEGSFGQVMEGTYFGKLVAIKKLKNSILPKVDMDEFR*
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mRNA from alignment at D-mesarthrocarpus_Contig996:17539..17682-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig996.6.1 ID=mRNA_D-mesarthrocarpus_Contig996.6.1|Name=mRNA_D-mesarthrocarpus_Contig996.6.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=144bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig996:17539..17682- (Discosporangium mesarthrocarpum MT17_79)
ATGAATCAGCTGGAAATGAGGGAGCTGATCGGTGAGGGCTCCTTTGGACA
GGTGATGGAAGGGACCTACTTCGGCAAACTGGTCGCCATCAAGAAGCTCA
AGAACAGCATCTTGCCGAAGGTCGATATGGATGAGTTCAGGTAG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig996:17539..17682-

>mRNA_D-mesarthrocarpus_Contig996.6.1 ID=mRNA_D-mesarthrocarpus_Contig996.6.1|Name=mRNA_D-mesarthrocarpus_Contig996.6.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=144bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig996:17539..17682- (Discosporangium mesarthrocarpum MT17_79)
ATGAATCAGCTGGAAATGAGGGAGCTGATCGGTGAGGGCTCCTTTGGACA
GGTGATGGAAGGGACCTACTTCGGCAAACTGGTCGCCATCAAGAAGCTCA
AGAACAGCATCTTGCCGAAGGTCGATATGGATGAGTTCAGGTAG
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