mRNA_D-mesarthrocarpus_Contig9957.5.3 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9957.5.3
Unique NamemRNA_D-mesarthrocarpus_Contig9957.5.3
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9957.5.3 vs. uniprot
Match: D7G2X9_ECTSI (Non-specific serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X9_ECTSI)

HSP 1 Score: 93.2 bits (230), Expect = 9.030e-20
Identity = 60/154 (38.96%), Postives = 75/154 (48.70%), Query Frame = 1
Query:   34 RFVARRGLTNLKRYQIDRVFLASAAGGGVVGHPK------EVWEADFDIMADSGSPNTTV------------------------------------------GVSEIKKQKS----NQVMGTFEAYLGPWCLRLGNVKMSQALLDLCGVPAEAR 339
            RFVAR G+T LKRYQIDR+FLA  AG      P       E WEADFDI++   S +                                             G  E+ + ++    +QVMGTFE +LGPW LRLG+VKMSQA+L+LCGVP + R
Sbjct: 1011 RFVARSGVTRLKRYQIDRIFLAGGAGES--DDPSSDRSCVEAWEADFDIISSGHSSSAAAASYGGAGRGVDGNSGITARLPTSLGGDGRGVRAALGHHDSGEGRFEVAEAEAVLVISQVMGTFEGFLGPWFLRLGHVKMSQAILELCGVPQDVR 1162          
BLAST of mRNA_D-mesarthrocarpus_Contig9957.5.3 vs. uniprot
Match: A0A8K1FFG5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FFG5_PYTOL)

HSP 1 Score: 77.4 bits (189), Expect = 3.080e-14
Identity = 41/102 (40.20%), Postives = 62/102 (60.78%), Query Frame = 1
Query:   34 RFVARRGLTNLKRYQIDRVFLASAAGGGVVGHPKEVWEADFDIMADSGSPNTTVGVSEIKKQKSNQVMGTFEAYLGPWCLRLGNVKMSQALLDLCGVPAEAR 339
            RFVAR  ++ LK YQ DRV+  SAAGGG   HP+E+ EADFDI+ D       + +  +  Q   +V+    + LG + LRL + ++++ +L+LCG+P   R
Sbjct:  924 RFVARHNISRLKCYQFDRVYRKSAAGGG---HPRELMEADFDIIWDDRGTFRFLELEGL--QLVAEVINALSSSLGSYYLRLNDARITRGILELCGIPPSGR 1020          
BLAST of mRNA_D-mesarthrocarpus_Contig9957.5.3 vs. uniprot
Match: A0A485L0L6_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L0L6_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 1.980e-13
Identity = 40/102 (39.22%), Postives = 62/102 (60.78%), Query Frame = 1
Query:   34 RFVARRGLTNLKRYQIDRVFLASAAGGGVVGHPKEVWEADFDIMADSGSPNTTVGVSEIKKQKSNQVMGTFEAYLGPWCLRLGNVKMSQALLDLCGVPAEAR 339
            RF+AR G++ LKRYQ  RVF  + +GG    HP+E++EADFD++ D  +    + +  +  Q   Q + TF   LG   +RL + ++S+ +LDLC VP  +R
Sbjct:  812 RFIARNGVSQLKRYQFGRVFRRNVSGG----HPREIYEADFDLVWDEKNTGRVMELEVL--QVVRQTLDTF-GLLGTAHVRLSDARLSRGILDLCDVPVASR 906          
BLAST of mRNA_D-mesarthrocarpus_Contig9957.5.3 vs. uniprot
Match: A0A5D6XRI4_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XRI4_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 2.710e-13
Identity = 40/103 (38.83%), Postives = 63/103 (61.17%), Query Frame = 1
Query:   34 RFVARRGLTNLKRYQIDRVFLASAAGGGVVGHPKEVWEADFDIMADSGSPNTTVGVSEIKK-QKSNQVMGTFEAYLGPWCLRLGNVKMSQALLDLCGVPAEAR 339
            RFVAR  ++ LK +Q DRV+  S  GG    HP+E+ EADFD++ D   P ++    E++  +   +V+G   A LG + LR  + ++++A+L+LC VP  AR
Sbjct:  873 RFVARHNISRLKCFQFDRVYRRSVVGG----HPRELLEADFDVIWDDRGPPSSSCFLELEGIEVVAEVIGALAAPLGSYYLRFNDARITRAVLELCDVPPSAR 971          
BLAST of mRNA_D-mesarthrocarpus_Contig9957.5.3 vs. uniprot
Match: A0A2D4BFF9_PYTIN (Non-specific serine/threonine protein kinase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BFF9_PYTIN)

HSP 1 Score: 70.5 bits (171), Expect = 8.320e-12
Identity = 39/102 (38.24%), Postives = 61/102 (59.80%), Query Frame = 1
Query:   34 RFVARRGLTNLKRYQIDRVFLASAAGGGVVGHPKEVWEADFDIMADSGSPNTTVGVSEIKKQKSNQVMGTFEAYLGPWCLRLGNVKMSQALLDLCGVPAEAR 339
            RFVAR  ++ LK YQ DRV+  S     V GHP+E+ EADFD++ D       + +  +  Q   +V+    + LG + LRL + ++++A+L+LCGVP+  R
Sbjct:  938 RFVARHNVSRLKCYQFDRVYRKSV----VSGHPRELLEADFDLIWDDRGTFRFLELEAL--QVVAEVVRALSSSLGSYYLRLNDARVTRAILELCGVPSAGR 1033          
BLAST of mRNA_D-mesarthrocarpus_Contig9957.5.3 vs. uniprot
Match: A0A1V9YPQ6_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YPQ6_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 2.870e-11
Identity = 40/113 (35.40%), Postives = 62/113 (54.87%), Query Frame = 1
Query:    1 VFPMVLLVGVIRFVARRGLTNLKRYQIDRVFLASAAGGGVVGHPKEVWEADFDIMADSGSPNTTVGVSEIKKQKSNQVMGTFEAYLGPWCLRLGNVKMSQALLDLCGVPAEAR 339
            V P  L   + R+VAR GL+ LKRY   RV+  +  GG    HP+E+ EADFD++ D  S    + +  +     ++V+ T    L PW LR+ + ++++ +LD C VP   R
Sbjct:  795 VLPFDLTEPLARYVARNGLSQLKRYHFGRVYRKTIGGG----HPRELLEADFDLVWDDRSFARVMEIEVL--HVVHEVLETLG--LSPWFLRINDARLARGILDACDVPLSCR 899          
BLAST of mRNA_D-mesarthrocarpus_Contig9957.5.3 vs. uniprot
Match: A0A6G0X998_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X998_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 9.920e-11
Identity = 36/104 (34.62%), Postives = 60/104 (57.69%), Query Frame = 1
Query:   34 RFVARRGLTNLKRYQIDRVFLASAAGGGVVGHPKEVWEADFDIMADSGSPNTTVGVSEIKKQKSNQVMGTFEAY--LGPWCLRLGNVKMSQALLDLCGVPAEAR 339
            RF+AR G+T +KRYQ  RVF  + +GG    HP+E++EADFD++ D       + +  +     + V   FE++  L    +R+ + ++S+ +LD+C VP   R
Sbjct:  810 RFIARNGVTQMKRYQFGRVFRKNVSGG----HPREIFEADFDLVWDEKHTGRIMEMEVL-----HVVRQAFESFGLLTTSYVRISDARLSRGILDMCDVPVATR 904          
BLAST of mRNA_D-mesarthrocarpus_Contig9957.5.3 vs. uniprot
Match: T0S0I9_SAPDV (Non-specific serine/threonine protein kinase n=2 Tax=Saprolegnia TaxID=4769 RepID=T0S0I9_SAPDV)

HSP 1 Score: 67.4 bits (163), Expect = 9.950e-11
Identity = 40/113 (35.40%), Postives = 62/113 (54.87%), Query Frame = 1
Query:    1 VFPMVLLVGVIRFVARRGLTNLKRYQIDRVFLASAAGGGVVGHPKEVWEADFDIMADSGSPNTTVGVSEIKKQKSNQVMGTFEAYLGPWCLRLGNVKMSQALLDLCGVPAEAR 339
            V P  L   + R+VAR GL+ LKRY   RV+  +  GG    HP+E+ EADFD++ D  S    + +  +     ++V+ T    L PW LR+ + ++++ +LD C VP   R
Sbjct:  807 VLPFDLTEPLARYVARNGLSQLKRYHCGRVYRKTIGGG----HPRELLEADFDLIWDDRSFARVMEIEVL--HVVHEVLETLG--LSPWFLRINDARLARGILDACEVPHACR 911          
BLAST of mRNA_D-mesarthrocarpus_Contig9957.5.3 vs. uniprot
Match: A0A7S1TX62_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TX62_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 2.890e-9
Identity = 42/112 (37.50%), Postives = 61/112 (54.46%), Query Frame = 1
Query:   34 RFVARRGLTNLKRYQIDRVF---LASAAGGGVVGH-PKEVWEADFDIMADSGSPNTTVG--VSEIKKQKSN----QVMGTFEAYLGPWCLRLGNVKMSQALLDLCGVPAEAR 339
            R  AR  ++NLKRYQI RVF   L    GGG   H P E  EADFDI+ D+   +        E+ + ++     +VM   +A+ G   L++ N+KM+ ALL+L G+   A+
Sbjct:  424 RMAARGNISNLKRYQIGRVFYRGLRRGVGGGDSRHVPVEAVEADFDILQDADPVDAAASFMTPEVCEAETVLVALRVMHALDAFTGASVLKVNNIKMTAALLELMGLSKAAK 535          
BLAST of mRNA_D-mesarthrocarpus_Contig9957.5.3 vs. uniprot
Match: A0A835YR31_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR31_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 3.070e-9
Identity = 38/97 (39.18%), Postives = 50/97 (51.55%), Query Frame = 1
Query:   34 RFVARRGLTNLKRYQIDRVFLASAAGGGVVGHPKEVWEADFDIM-ADSGSPNTTVGVSEIKKQKSNQVMGTFEAYLGPWCLRLGNVKMSQALLDLCG 321
            RFVARRG+ N+KRYQI RV   S        H  E  EA FDI+ A + + +                      ++GPW L+LG+ K+S A+LDLCG
Sbjct: 1064 RFVARRGVANVKRYQIGRVCWRSPNDT----HYSEALEAGFDIVSAGAAAGHAPEXXXXXXXXXXXXXXXXXXXHIGPWVLKLGHAKLSSAILDLCG 1156          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9957.5.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
D7G2X9_ECTSI9.030e-2038.96Non-specific serine/threonine protein kinase n=1 T... [more]
A0A8K1FFG5_PYTOL3.080e-1440.20Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A485L0L6_9STRA1.980e-1339.22Non-specific serine/threonine protein kinase n=1 T... [more]
A0A5D6XRI4_9STRA2.710e-1338.83Non-specific serine/threonine protein kinase n=1 T... [more]
A0A2D4BFF9_PYTIN8.320e-1238.24Non-specific serine/threonine protein kinase n=1 T... [more]
A0A1V9YPQ6_9STRA2.870e-1135.40Non-specific serine/threonine protein kinase n=1 T... [more]
A0A6G0X998_9STRA9.920e-1134.62Non-specific serine/threonine protein kinase n=1 T... [more]
T0S0I9_SAPDV9.950e-1135.40Non-specific serine/threonine protein kinase n=2 T... [more]
A0A7S1TX62_9STRA2.890e-937.50Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A835YR31_9STRA3.070e-939.18Non-specific serine/threonine protein kinase n=1 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9957contigD-mesarthrocarpus_Contig9957:2800..3737 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7G2X9
PFAMsHGTP_anticodon2,Pkinase,RWD,tRNA-synt_His
Model size339
Max annot lvl2759|Eukaryota
KEGG koko:K16196
KEGG Pathwayko04138,ko04140,ko04141,ko05160,ko05162,ko05164,ko05168,ko05169,map04138,map04140,map04141,map05160,map05162,map05164,map05168,map05169
Hectar predicted targeting categorymitochondrion
Exons3
Evalue9.66e-21
EggNOG OGsCOG0124@1|root,KOG1035@2759|Eukaryota
EC2.7.11.1
Descriptioneukaryotic translation initiation factor 2alpha kinase activity
Cds size330
COG categoryJ
BRITEko00000,ko00001,ko01000,ko01001
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791145.53709-CDS-D-mesarthrocarpus_Contig9957:2799..29331680791145.53709-CDS-D-mesarthrocarpus_Contig9957:2799..2933Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9957 2800..2933 -
1680791145.5527306-CDS-D-mesarthrocarpus_Contig9957:3490..35831680791145.5527306-CDS-D-mesarthrocarpus_Contig9957:3490..3583Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9957 3491..3583 -
1680791145.5635083-CDS-D-mesarthrocarpus_Contig9957:3625..37281680791145.5635083-CDS-D-mesarthrocarpus_Contig9957:3625..3728Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9957 3626..3728 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791145.5754209-UTR-D-mesarthrocarpus_Contig9957:3728..37371680791145.5754209-UTR-D-mesarthrocarpus_Contig9957:3728..3737Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig9957 3729..3737 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9957.5.3prot_D-mesarthrocarpus_Contig9957.5.3Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9957 2800..3728 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9957.5.3

>prot_D-mesarthrocarpus_Contig9957.5.3 ID=prot_D-mesarthrocarpus_Contig9957.5.3|Name=mRNA_D-mesarthrocarpus_Contig9957.5.3|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=110bp
MVLLVGVIRFVARRGLTNLKRYQIDRVFLASAAGGGVVGHPKEVWEADFD
IMADSGSPNTTVGVSEIKKQKSNQVMGTFEAYLGPWCLRLGNVKMSQALL
DLCGVPAEAR
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mRNA from alignment at D-mesarthrocarpus_Contig9957:2800..3737-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9957.5.3 ID=mRNA_D-mesarthrocarpus_Contig9957.5.3|Name=mRNA_D-mesarthrocarpus_Contig9957.5.3|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=938bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9957:2800..3737- (Discosporangium mesarthrocarpum MT17_79)
GTGTTCCCAATGGTTTTGCTTGTCGGGGTCATAAGGTTCGTGGCACGGCG GGGGCTCACCAACCTCAAGCGGTACCAGATAGACCGGGTGTTCCTCGCCA GTGCCGCAGGCGGTGGCACCCCTGAGGGCGGAGGGGCTGGTATCTCTCAA GCAGGGGGGGTTGTGGGTCACCCAAAGGAGGTCTGGGAAGCAGACTTCGA CATCATGGCCGACTCAGGGTCTCCCAATACCACGGTAGGCGTTTCCGGTG CAGCAGGGGGCAGCGGGGGTACTGCCGGGGGGGGGAGTACTCCGGGGCAC ATGTTGGAGGCTGAAGCCGTCTTGGTGACAGCGCAGGTTAGTAGATTGGG CTGATGGGGCGGTTTTGGTGAGAACCAGGTGTAGTCCTGAATTTGTTCAA GCTTTTAAGTTGTGCTGAGCCCTGAGGAAGAAGTCGCGGATACCCACCTC AAAGTTGGAGCTTCATTCCTCTGCAGCAGTTTTTTTTGTTTAAGAGAAAT GCTGCACCGTGGACCTTTTTTTCCCCAAGACTTGTGGTCTGAAGAGCTCA GTGGTGCCCGAAGGTTTTCCCCTGTTCAGCAGGTAAGCTGGTTTCTTGTT GATTGTGTTTATCAATCGTTTGGTTGTGGAAGCCCTTGGCTGGTTTTGTC GAGACTGGGGTAGAGCCTGTCAACCTGATGAATGAGCACCACTGTAAATG CTTAGTGTAATGTTCTTCGAGGAATCTATACTTCCATTGGCGCACTCCTG TGTGTATGTGTTCTGTACTGTCATCATCCCAAGGCGCACAATAGTAAAAA ACAGAAATCAAAAAACAAAAATCGAACCAGGTGATGGGAACGTTCGAAGC CTACCTTGGTCCCTGGTGCCTAAGACTGGGCAATGTGAAGATGTCTCAAG CTCTCCTGGACCTCTGCGGCGTGCCTGCAGAGGCTCGA
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9957:2800..3737-

>mRNA_D-mesarthrocarpus_Contig9957.5.3 ID=mRNA_D-mesarthrocarpus_Contig9957.5.3|Name=mRNA_D-mesarthrocarpus_Contig9957.5.3|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=330bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9957:2800..3737- (Discosporangium mesarthrocarpum MT17_79)
ATGGTTTTGCTTGTCGGGGTCATAAGGTTCGTGGCACGGCGGGGGCTCAC
CAACCTCAAGCGGTACCAGATAGACCGGGTGTTCCTCGCCAGTGCCGCAG
GCGGGGGGGTTGTGGGTCACCCAAAGGAGGTCTGGGAAGCAGACTTCGAC
ATCATGGCCGACTCAGGGTCTCCCAATACCACGGTAGGCGTTTCCGAAAT
CAAAAAACAAAAATCGAACCAGGTGATGGGAACGTTCGAAGCCTACCTTG
GTCCCTGGTGCCTAAGACTGGGCAATGTGAAGATGTCTCAAGCTCTCCTG
GACCTCTGCGGCGTGCCTGCAGAGGCTCGA
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