mRNA_D-mesarthrocarpus_Contig9950.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9950.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig9950.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig9950.1.1 vs. uniprot
Match: A0A6H5J8E2_9PHAE (6-pyruvoyltetrahydropterin synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8E2_9PHAE)

HSP 1 Score: 156 bits (394), Expect = 7.410e-43
Identity = 69/108 (63.89%), Postives = 90/108 (83.33%), Query Frame = 1 
Query:    1 QLCSDGYVIDFGMVKTTTRKVCKELNERFLCPMKSDVLLIDYNDKQLKISCQDGAEFLFPKDDCVLLPIVHSTAEELAHFIYTRLLRDFTLPFLHSRGVTDIEVAVGE 324
            ++C DGYV+DFG+VK   RK+CK LNERFLCPM+SD L I     Q+ I CQDGA F+ P+DDC LLP+V+STAEEL+HF+++RLLR+FTLP+LHSRGVT+++V+V E
Sbjct:  210 EVCEDGYVVDFGIVKKVMRKLCKGLNERFLCPMESDALDITLTGSQVVIVCQDGATFVLPRDDCALLPLVNSTAEELSHFLFSRLLREFTLPYLHSRGVTEMDVSVAE 317
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig9950.1.1 vs. uniprot
Match: A0A7R9UEV5_9STRA (6-pyruvoyltetrahydropterin synthase (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UEV5_9STRA)

HSP 1 Score: 130 bits (326), Expect = 1.510e-35
Identity = 54/104 (51.92%), Postives = 80/104 (76.92%), Query Frame = 1 
Query:   13 DGYVIDFGMVKTTTRKVCKELNERFLCPMKSDVLLIDYNDKQLKISCQDGAEFLFPKDDCVLLPIVHSTAEELAHFIYTRLLRDFTLPFLHSRGVTDIEVAVGE 324
            DGYV+DFG +K  TR++CKELNERF+CPM SDV+ ++  + Q+ + C+DGA F  P+ DC +LP+VHSTAEE++ F +  L+++FT+ +L +RGVT +E+ V E
Sbjct:  104 DGYVVDFGDIKKVTRRLCKELNERFICPMYSDVMEVELGEDQVVLRCEDGAYFSLPRGDCAVLPLVHSTAEEISRFFWCNLVQEFTIEWLKARGVTAVEITVSE 207
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig9950.1.1 vs. uniprot
Match: A0A835ZBF3_9STRA (6-pyruvoyltetrahydropterin synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBF3_9STRA)

HSP 1 Score: 129 bits (323), Expect = 3.110e-35
Identity = 58/108 (53.70%), Postives = 78/108 (72.22%), Query Frame = 1 
Query:    1 QLCSDGYVIDFGMVKTTTRKVCKELNERFLCPMKSDVLLIDYNDKQLKISCQDGAEFLFPKDDCVLLPIVHSTAEELAHFIYTRLLRDFTLPFLHSRGVTDIEVAVGE 324
            ++  DGYV+D   V+  TR++CKELNERFLCP +S+V+    +D Q+ + CQDG  F FP+ DC LLPI+HSTAEELAH++Y RL+ DFT  +L  RGV  +E+ V E
Sbjct:   69 EVAHDGYVMDVEEVRRVTRRLCKELNERFLCPQRSNVINSKISDGQVLMKCQDGCLFSFPESDCALLPIMHSTAEELAHYLYNRLVHDFTPEYLRLRGVRTLEICVSE 176
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig9950.1.1 vs. uniprot
Match: A0A835ZGK8_9STRA (6-pyruvoyltetrahydropterin synthase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGK8_9STRA)

HSP 1 Score: 125 bits (313), Expect = 1.850e-34
Identity = 57/108 (52.78%), Postives = 77/108 (71.30%), Query Frame = 1 
Query:    1 QLCSDGYVIDFGMVKTTTRKVCKELNERFLCPMKSDVLLIDYNDKQLKISCQDGAEFLFPKDDCVLLPIVHSTAEELAHFIYTRLLRDFTLPFLHSRGVTDIEVAVGE 324
            Q+  DGYVIDFG +K  TR++C EL++RFL P +S+V+     D Q+ + CQDG+ F  P+ DC LLPI+HSTAEELAH++Y RL+ DFT  +L  RGV  +E+ V E
Sbjct:   43 QVAHDGYVIDFGDIKRMTRRLCAELDQRFLYPQRSNVINSKVTDGQVMMKCQDGSLFTMPEADCALLPIMHSTAEELAHYLYNRLVHDFTPEYLRMRGVRTMEITVAE 150
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig9950.1.1 vs. uniprot
Match: A0A1V9Y6Z9_9STRA (6-pyruvoyltetrahydropterin synthase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y6Z9_9STRA)

HSP 1 Score: 124 bits (310), Expect = 4.970e-34
Identity = 57/104 (54.81%), Postives = 79/104 (75.96%), Query Frame = 1 
Query:   13 DGYVIDFGMVKTTTRKVCKELNERFLCPMKSDVLLIDYNDKQLKISCQDGAEFLFPKDDCVLLPIVHSTAEELAHFIYTRLLRDFTLPFLHSRGVTDIEVAVGE 324
            DGYVIDFG +K++ RK+CKELNE FL PMKSDVL I  +D  ++++ +DG +F FPK DC  LPI+HS+AEELA +I  RL+ +FTL  L++R V  +E+++ E
Sbjct:   37 DGYVIDFGHIKSSARKICKELNEHFLVPMKSDVLTIVVDDMNVQLTTEDGQKFSFPKADCSFLPIIHSSAEELAIYICGRLIEEFTLTELNARNVFKLEISIAE 140
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig9950.1.1 vs. uniprot
Match: A0A7R9VKT6_9STRA (6-pyruvoyltetrahydropterin synthase (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VKT6_9STRA)

HSP 1 Score: 123 bits (309), Expect = 9.400e-34
Identity = 54/104 (51.92%), Postives = 77/104 (74.04%), Query Frame = 1 
Query:   13 DGYVIDFGMVKTTTRKVCKELNERFLCPMKSDVLLIDYNDKQLKISCQDGAEFLFPKDDCVLLPIVHSTAEELAHFIYTRLLRDFTLPFLHSRGVTDIEVAVGE 324
            DGYV+D+G VK  T++VCKE+NE FLCPM+SDV+ I    + +K+ C+DGA F+FPK+DC +LPIVH+T EELA +++ ++L      +L  RG+  +EV VGE
Sbjct:   27 DGYVLDYGCVKKVTKEVCKEINEHFLCPMRSDVIDISTEGESVKLICEDGAVFVFPKEDCYMLPIVHATTEELAVYLWGKILAGLDSDYLVKRGIHTMEVTVGE 130
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig9950.1.1 vs. uniprot
Match: A0A6G0WJG5_9STRA (6-pyruvoyltetrahydropterin synthase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WJG5_9STRA)

HSP 1 Score: 120 bits (302), Expect = 8.850e-33
Identity = 58/104 (55.77%), Postives = 74/104 (71.15%), Query Frame = 1 
Query:   13 DGYVIDFGMVKTTTRKVCKELNERFLCPMKSDVLLIDYNDKQLKISCQDGAEFLFPKDDCVLLPIVHSTAEELAHFIYTRLLRDFTLPFLHSRGVTDIEVAVGE 324
            DGY++DFG +KT  R VC+ELNE FL PMKSDVL ID ND+ + +  +DG  F FP+DDC LLPIVHS+AEELA ++   LL  FT+  +  R  T IEV++ E
Sbjct:   37 DGYLMDFGDIKTIARDVCRELNEHFLVPMKSDVLKIDANDENVTLVTEDGKTFSFPRDDCSLLPIVHSSAEELALYLMDVLLERFTMEKMQQRHATKIEVSIAE 140
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig9950.1.1 vs. uniprot
Match: B7FTA7_PHATC (6-pyruvoyltetrahydropterin synthase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FTA7_PHATC)

HSP 1 Score: 121 bits (303), Expect = 9.830e-33
Identity = 54/108 (50.00%), Postives = 74/108 (68.52%), Query Frame = 1 
Query:    1 QLCSDGYVIDFGMVKTTTRKVCKELNERFLCPMKSDVLLIDYNDKQLKISCQDGAEFLFPKDDCVLLPIVHSTAEELAHFIYTRLLRDFTLPFLHSRGVTDIEVAVGE 324
            Q+ +DGY+IDFG VK   +KVCK +NE FLCP+ SDVL I   ++ ++I C DG  F+FP  DCV+LPI H+TAEELA ++Y  +L      +L  RG+  +E+AV E
Sbjct:   50 QIGADGYLIDFGCVKDVCKKVCKRINEHFLCPVHSDVLKITTENESVRIECADGTYFVFPAADCVMLPIFHATAEELAIYLYAEILNGLNADYLQKRGIHTMEIAVAE 157
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig9950.1.1 vs. uniprot
Match: W7TPC8_9STRA (6-pyruvoyltetrahydropterin synthase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPC8_9STRA)

HSP 1 Score: 122 bits (305), Expect = 1.690e-32
Identity = 54/104 (51.92%), Postives = 75/104 (72.12%), Query Frame = 1 
Query:   13 DGYVIDFGMVKTTTRKVCKELNERFLCPMKSDVLLIDYNDKQLKISCQDGAEFLFPKDDCVLLPIVHSTAEELAHFIYTRLLRDFTLPFLHSRGVTDIEVAVGE 324
            DGY+IDFG +K  TR +CKELNERFLCP +SDV+ ID    ++ ++C+DGA F+ P  DC +LP+VHSTAEELA + + RL   F++  L SRG+  +++ V E
Sbjct:   41 DGYLIDFGDIKLVTRALCKELNERFLCPTRSDVIQIDVEGPRISLACEDGALFVLPTADCAMLPVVHSTAEELAQYFWHRLTTSFSVDRLLSRGIHTLQIMVAE 144
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig9950.1.1 vs. uniprot
Match: A0A485LJ40_9STRA (6-pyruvoyltetrahydropterin synthase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LJ40_9STRA)

HSP 1 Score: 120 bits (301), Expect = 1.760e-32
Identity = 56/104 (53.85%), Postives = 76/104 (73.08%), Query Frame = 1 
Query:   13 DGYVIDFGMVKTTTRKVCKELNERFLCPMKSDVLLIDYNDKQLKISCQDGAEFLFPKDDCVLLPIVHSTAEELAHFIYTRLLRDFTLPFLHSRGVTDIEVAVGE 324
            DGY+IDFG +K   + +C+ELNE FL PMKSDVL ID ND+ ++++ +DG  F FP+DDC LLPIVHS+AEELA ++   LL  FT+  + +R  T IEV++ E
Sbjct:   49 DGYLIDFGDIKKIAKDICRELNEHFLVPMKSDVLQIDANDENVRLTTEDGKTFSFPRDDCSLLPIVHSSAEELARYLTDVLLDRFTMEQMKARHATKIEVSIAE 152
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9950.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J8E2_9PHAE7.410e-4363.896-pyruvoyltetrahydropterin synthase n=1 Tax=Ectoca... [more]
A0A7R9UEV5_9STRA1.510e-3551.926-pyruvoyltetrahydropterin synthase (Fragment) n=1... [more]
A0A835ZBF3_9STRA3.110e-3553.706-pyruvoyltetrahydropterin synthase n=1 Tax=Tribon... [more]
A0A835ZGK8_9STRA1.850e-3452.786-pyruvoyltetrahydropterin synthase (Fragment) n=1... [more]
A0A1V9Y6Z9_9STRA4.970e-3454.816-pyruvoyltetrahydropterin synthase n=1 Tax=Thraus... [more]
A0A7R9VKT6_9STRA9.400e-3451.926-pyruvoyltetrahydropterin synthase (Fragment) n=1... [more]
A0A6G0WJG5_9STRA8.850e-3355.776-pyruvoyltetrahydropterin synthase n=1 Tax=Aphano... [more]
B7FTA7_PHATC9.830e-3350.006-pyruvoyltetrahydropterin synthase n=2 Tax=Phaeod... [more]
W7TPC8_9STRA1.690e-3251.926-pyruvoyltetrahydropterin synthase n=1 Tax=Nannoc... [more]
A0A485LJ40_9STRA1.760e-3253.856-pyruvoyltetrahydropterin synthase n=1 Tax=Aphano... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9950contigD-mesarthrocarpus_Contig9950:3..3693 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2850.Phatr50741
PFAMsPTPS
Model size324
Max annot lvl2836|Bacillariophyta
KEGG rclassRC01117
KEGG koko:K22101
KEGG ReactionR04286,R11719
KEGG Pathwayko00790,map00790
KEGG ModuleM00841
Hectar predicted targeting categoryother localisation
Exons4
Evalue1.61e-33
EggNOG OGsCOG0720@1|root,2S1HP@2759|Eukaryota,2XGW8@2836|Bacillariophyta
EC4.1.2.60,4.2.3.12
Description6-pyruvoyl tetrahydropterin synthase
Cds size324
COG categoryH
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791145.1160922-CDS-D-mesarthrocarpus_Contig9950:2..1431680791145.1160922-CDS-D-mesarthrocarpus_Contig9950:2..143Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9950 3..143 -
1680791145.135981-CDS-D-mesarthrocarpus_Contig9950:674..7191680791145.135981-CDS-D-mesarthrocarpus_Contig9950:674..719Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9950 675..719 -
1680791145.1494582-CDS-D-mesarthrocarpus_Contig9950:2826..29161680791145.1494582-CDS-D-mesarthrocarpus_Contig9950:2826..2916Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9950 2827..2916 -
1680791145.1641037-CDS-D-mesarthrocarpus_Contig9950:3645..36931680791145.1641037-CDS-D-mesarthrocarpus_Contig9950:3645..3693Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9950 3646..3693 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9950.1.1prot_D-mesarthrocarpus_Contig9950.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9950 3..3693 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9950.1.1

>prot_D-mesarthrocarpus_Contig9950.1.1 ID=prot_D-mesarthrocarpus_Contig9950.1.1|Name=mRNA_D-mesarthrocarpus_Contig9950.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=108bp
QLCSDGYVIDFGMVKTTTRKVCKELNERFLCPMKSDVLLIDYNDKQLKIS
CQDGAEFLFPKDDCVLLPIVHSTAEELAHFIYTRLLRDFTLPFLHSRGVT
DIEVAVGE
back to top

mRNA from alignment at D-mesarthrocarpus_Contig9950:3..3693-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9950.1.1 ID=mRNA_D-mesarthrocarpus_Contig9950.1.1|Name=mRNA_D-mesarthrocarpus_Contig9950.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3691bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9950:3..3693- (Discosporangium mesarthrocarpum MT17_79)
CAGCTGTGTAGTGATGGTTACGTCATCGACTTTGGCATGGTGAAGACGGT
GAGAGTGGCCTTTAGGGCTAGCGTTAGGTCTGTGGGCGGCGCCATCTGGA
ATTGTTTTTCTGGGGCGATAAGCCTAACCCTAAGGCTAAGGTTATCTAAG
AACCCCGAGGCAGATAATTTTATTTTTTGTGGGCTGTGTGTGTGTGGCAA
GAAGGTTGTTGCTGTGTTTGGGTCAGGTAGTCAGGTAGTCATGTAGTCAG
GTAGTCAGGGCGCTGCATTGTGCGAGGTGGTGTGGGGAGGAAGCGGTAAG
GTTTGAGATGGAGAGGGGGGGCAAGGACAATGGGCTTGTGTTCAGAATTG
TTTATTGCACCCTCTGCCCCGGGGTCATCAGAATTTGTGCCAAAGGAGTA
ATCAAAGGGTTGGTTGGAAGAGGGTCCTGGCCTCTGTTTGTGGCGGCATT
GGCAGCCTGCTTTGTCCTGCTGCAGTGAAAATGCTTGTGATTGTGATGGT
TTTAATTTCGCTTGTGCTTGAAACCACTGCACCTTGGTTCATCTTTTTAG
AGTGTTAGAAAGCCTGCTGTGCCATAGCGAGCTCTGATGGCAATCACATG
GTACCATGGGCTACCTTGCGTTTATTTGAGGTAGATGCTACCACAACGCA
TGAAGTAGATGCTACTGTGGTATGTAAATGTGGCTCAACGGTGACTACCA
CCATGTCATGACTGGCGAGCACAACTGCAACAACCCCCCCCTCCCTTTCG
TCTGTTCCCGCTTTGGACACATCCCAGACTACGAGGAAAGTATGCAAGGA
GCTCAATGAGCGCTTCCTGTGCCCTATGAAGAGTGATGTGCTGTTGATTG
ACTACAATGACAAGCAGGTGGGGTGTCTGCCGTGGCCGCTGCCTCTGGCT
TGTCCTTTTTTTTTTCTCGTCTTTTTGATGTCTGCTTTCCCGCTCACAAA
AAACGTCCTTCCGAAAAACTTCATGCCCTTTAAAGTCATCCTCCGATTAT
CTTCCACGTGCCGTTCATGTAGTGGAGTGTAGTGCAGTATGAGTGCTTTC
TGTCTACTGACGAAGGTCTGGCGTGCTGGACGGCAGGGCCCTATGGAAAC
GCCAAGTACGCACGGTACAGAGGATGATGGAATGTGGTGCAGTGTTTGGT
ATGTGCAGCAGGGCATCGTAGAGAGTTTGGGCCGTCTTTTGGGTTGTGGG
GTCAGGGCTGTATTTGCTGTCACAGGAGGGATCCCTGCTCCCCCGTGGGT
GAACGGTGGATGGATGGTGTGCCAATGGCTTGAGGTACTGCGGCTTGGAA
CTCAACACATGCAAGAGTGGAGCATGGTCCTCTCGTTATGTGGAAGGCCC
CGAGAATGATGTGAAGTGGATTGGTAATGGGCCTCGGCAAAGGTGCAGGC
ACAGTGCTAAGCTGACCAGGTCACAACTATGGCAGCCTTTTTCAAAGACC
AGACAGACCAGCCGCCCGGTGAACATTTGGAGATGCATGGCTATGTAGCA
CCACAAGCACACGACCTTTGACGGGGCTGCTCCCGGTGCATTAAAATGCT
AGGTTAGGGCTGGGATAAGGATTGGGATTAGGGTTGGGGTTAGAGTTAGG
GTTAGGGTCAGGGTTAGGGTCAGGGTTAGGATTAGGGTTAAGGTTAGGAT
TGGGGTTAGGGTTAGGGTCAGGGTTAGTGTTAGTGTTAGTGTTAGTGTTA
GTGTTAGTGTTAGTGTTAGTGTTAGGGTTAGGGTTAGGGTTATGGTTATG
GTAAGGGTTTAGGGTAAGGATAAAGCCCAGAGGGAGGGGGGACTTGCTCA
ATAATGCAACAGTGGATCAGGCCACCTATACTGCCGAACTGGTACTCTGA
AAGTTTAAAAGGGGGGGGGTGGGGGTGGGTATCTGGGCATCAGGAAGATA
ACTTTCAACCATTTTTCAAGACCTGATATTCTGGGTGTGCATGGCATGAC
CCAAATGATACTTGAATACGGCAGAAGATGGGAAATCAAAGCCTTCCATG
TGCGCTGGACTGTTCTATTTAGACATAGCTTTTGTCTAAATTGCAGTGTA
CTTCATATGCAATTATATGTGAAGTATATGTGAAGTATATGCCAATATAT
TCCAGTACATGTGTAGCATATGTGTAGTATATGTGCAATACATGTGAAGT
ATATGTGTTGGGATATATGAAGTATATCTGTAATATATATGAAGTGTATG
TGTAGTATATATGAAGTATATGCATATGAGGTACCTGGTATCATAGGAGT
AGTGAGGCTTGGTTTTTTCAAGAGGTTTGACTTGCTTGCCGCTGGTTGGA
TTGCTCTTCGCGGTTAGGTCTTCACACGCACGGCTAAGAGGGAATCACGG
ATCTTTTGGGCAGGAATCACCAATTTCTCACCTGTGGGTTGAACAAAAAT
ATGGAGAAAAACACTGCCGTGTGATGATATTGCTACTTATAAAGCAAAGT
TGAGTATTGTATGGGTTTTAATGTGTGGGCTGGGACCAAGATCGGGGAAA
TCAATTGTAGCTATATTTGTAGATAAACCAATTTTACCAGTTTGCTGTAG
CTTTAATCAAGTTTTTGGTGGAAGGGGCTCTTGTTGCTAGAAAAAGATGG
GCACTCAGCTAGGCCCCTGCACATGTGGATGGAATTTAGTCGTGCTGAAG
TAGTGTGTAGCTCTAGACCAGTGATGGAGAAGAGAAAAGAAAACTCTTGA
CACTGCCTTTCAGGTCATAGCCCTTTCTGAACCCTTAACTCTTCCTACCA
TACCCGTAGCATCATTGGTAGCGAGGGCTTCAGAGGAGAGGAACCCTACC
CTCTTTCATCCAGGATGCCCCACCCCTACCAGTGGTATCTCCTCACTTTT
TGAGCATGCGCTGACCCTGCCAGTTTGACTATATCTTTCCCCCATCCTGG
CCTTGTCTTTTTCATCTGTGCAACTTGCATCTTTCCTTCCCCCCCCCCCC
TCTCACTTCATATGGAAAATGCAGCTGAAGATCTCGTGTCAAGATGGGGC
TGAATTTCTGTTTCCCAAGGTGAAGGACATAATCGAGGACACGGTGCAGA
TATCGTAAGAGTGATTTTTTCAGTGCAGAGCTAAAGCCAAGGGACTGTAA
GAGTTGAAAAAAGAAAAAGAAAAATGTGCACCCCCCCCCTCCCTTTAGAT
GTCATTTTTGTCTCCCATGAAGTATCACCCCATGGGAGCTCACCTAATGT
TTGGTTGGCAGTTATTAGTTCCGAAATTCACAAGATTTATCTCAAAATGA
AGATGCCTCGAGGTGTGAGGCTCTGAGACTCTCTTCTGGTGGGGTGGGGT
GAGGTGGGGGTCAAGCAGAGAAGAACAAGGTAGGCTTTCCCTTGTCGTGC
AAGGTTTGGGGTATAGGGTAGCTCGAGAGCCCTGCAGTTGTAGCTCTTCA
AAAGAAGCACGGAAAATGTTTAGCTAGCAACCAAGCTGCCCCCCCCCCCC
CCCCCTTTCTAACCTTTCCTCCTACTGTCCTGTGCTGATCCCTCACTCTT
GTCCCTGGCCGACAACAAACGCTGCGACACACCTTCCCGTGTACGCTCAG
GATGACTGTGTCTTACTCCCCATCGTGCACTCCACCGCTGAGGAGCTCGC
CCACTTCATCTACACTCGCCTGCTCAGGGACTTCACCCTCCCTTTCTTGC
ACTCGCGAGGTGTAACGGACATCGAGGTCGCGGTGGGGGAG
back to top

Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9950:3..3693-

>mRNA_D-mesarthrocarpus_Contig9950.1.1 ID=mRNA_D-mesarthrocarpus_Contig9950.1.1|Name=mRNA_D-mesarthrocarpus_Contig9950.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=324bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9950:3..3693- (Discosporangium mesarthrocarpum MT17_79)
CAGCTGTGTAGTGATGGTTACGTCATCGACTTTGGCATGGTGAAGACGAC
TACGAGGAAAGTATGCAAGGAGCTCAATGAGCGCTTCCTGTGCCCTATGA
AGAGTGATGTGCTGTTGATTGACTACAATGACAAGCAGCTGAAGATCTCG
TGTCAAGATGGGGCTGAATTTCTGTTTCCCAAGGATGACTGTGTCTTACT
CCCCATCGTGCACTCCACCGCTGAGGAGCTCGCCCACTTCATCTACACTC
GCCTGCTCAGGGACTTCACCCTCCCTTTCTTGCACTCGCGAGGTGTAACG
GACATCGAGGTCGCGGTGGGGGAG
back to top