mRNA_D-mesarthrocarpus_Contig9943.3.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9943.3.1 vs. uniprot
Match: D7G7V4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7V4_ECTSI) HSP 1 Score: 248 bits (634), Expect = 1.140e-78 Identity = 129/206 (62.62%), Postives = 158/206 (76.70%), Query Frame = 1
Query: 442 SLHPP----PPGSEGAQNPVSIWAMISRLVVALVEELEPESLQDLKQGLTSIASQVTPTTELEMVVPELVNMLGEGSPALKALKMVEQGVVLLGVHIMKGAVTDGLLTKDVRSPEGWQIGFDLFD-HVQVYHSRREQSVD-----VWSGPSNHFELDFEVRATFPRDMSELTTASLRIQRLVCAPTMVPEMRLELESRLLGDVIIV 1029
+L PP PP AQ P WA+I+RL LV ELEPE + ++++GL SIA +VT TT+LEMVVPEL+++LG AL+ALKMV+QGVVLLGVH MKG VT GL+TKDVRS GWQIG D+F+ +VQVYH RREQSVD G NHFELDFEVRATF R+M++LT A LR+QRLVC+PTM PEMR++LESR+LGD+II+
Sbjct: 7 ALQPPRDVLPPAPTQAQGPEETWALIARLTSTLVHELEPERMAEVERGLASIADRVTGTTDLEMVVPELIHLLGGDGKALRALKMVDQGVVLLGVHHMKGGVTRGLVTKDVRSASGWQIGMDVFEQYVQVYHKRREQSVDDMYSQTVDGADNHFELDFEVRATFDREMTQLTAAGLRVQRLVCSPTMQPEMRVQLESRILGDLIIL 212
BLAST of mRNA_D-mesarthrocarpus_Contig9943.3.1 vs. uniprot
Match: A0A6H5L330_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L330_9PHAE) HSP 1 Score: 245 bits (626), Expect = 1.910e-77 Identity = 125/190 (65.79%), Postives = 154/190 (81.05%), Query Frame = 1
Query: 475 AQNPVSIWAMISRLVVALVEELEPESLQDLKQGLTSIASQVTPTTELEMVVPELVNMLGEGSPALKALKMVEQGVVLLGVHIMKGAVTDGLLTKDVRSPEGWQIGFDLFD-HVQVYHSRREQSVDVWS----GPSNHFELDFEVRATFPRDMSELTTASLRIQRLVCAPTMVPEMRLELESRLLGDVIIV 1029
AQ P WA+I+RL LV ELEPE + ++++GL SIA++VT TT+LEMVVPEL+++LG S AL+ALKMV+Q VVLLGVH MKG VT GL+TKDVRS GWQIG D+F+ +VQVYH RREQSVD S G NHFELDFEVRATF R+M++LT A LR+QRLVC+PTM PEMR++LESR+LGD+II+
Sbjct: 24 AQGPEETWALITRLTSTLVHELEPEKMAEVERGLASIAARVTGTTDLEMVVPELIDLLGGDSKALRALKMVDQRVVLLGVHHMKGGVTRGLVTKDVRSASGWQIGMDVFEQYVQVYHKRREQSVDDMSQTVDGADNHFELDFEVRATFDREMTQLTAAGLRVQRLVCSPTMQPEMRVQLESRILGDMIIL 213
BLAST of mRNA_D-mesarthrocarpus_Contig9943.3.1 vs. uniprot
Match: A0A7S2SSQ3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSQ3_9STRA) HSP 1 Score: 118 bits (296), Expect = 6.200e-28 Identity = 76/219 (34.70%), Postives = 122/219 (55.71%), Query Frame = 1
Query: 382 SLAKDLPRLVHRVTVRTSRGSLHPPPPGSEGAQNPVSIWAMISRLVVALVEELEPESLQDLKQGLTSIASQVTPTTELEMVVPELVNMLG-EGSPALKALKMVEQGVVLLGVHIMKGAVTDG--LLTKDVRSPEGWQIGFDLFDHVQVYHSRREQSVDVWSGPSNHFELDFEVRATFPRDMSELTTASLRIQRLVCAPTMVPEMRLELESRL-LGDVII 1026
SLAKDLPRL R+ + + L GS G + S + ++V L L+P+ ++++ + ++ + ++ EL+ LG + SP ++ALK+V QGVVL + +++ +G +LTKDVRS +GW++ D+ Q+ H R+EQS+D++ + HFE +FEV AT +S +T A LR+ A TM P+ R EL+ L G II
Sbjct: 22 SLAKDLPRLASRIAITSPTLCLDAR--GSGGEEERTS---RVFQVVSLLSAVLQPDQCTEVEELCHAYDQRLAEGADPQIACTELLGALGGDESPVVRALKLVRQGVVLGAMELLRSQAPEGVDILTKDVRSVDGWRVYIDVQQAFQIRHVRKEQSLDMFGDATQHFEYEFEVSATLDSALSGVTAAWLRVLHAEYAETMKPDRRAELQQILGTGGAII 235
BLAST of mRNA_D-mesarthrocarpus_Contig9943.3.1 vs. uniprot
Match: A0A7S2DNQ4_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DNQ4_9STRA) HSP 1 Score: 106 bits (265), Expect = 1.800e-22 Identity = 70/195 (35.90%), Postives = 99/195 (50.77%), Query Frame = 1
Query: 469 EGAQNPVSIWAMISRLVVALVEELEPESLQDLKQGLTSIASQVTPTTELEMVVPELVNMLG-EGSPALKALKMVEQGVVLLGVHIMKGAVTDG------LLTKDVRSPEGWQIGFDLFDHV-QVYHSRREQSVDVWSGPSNHFELDFEVRATFPRDMSELTTASLRIQRLVCAPTMVPEMRLELESRLLGDVIIV 1029
E + P + + ++V AL L+P + + SQV + +M ++VN LG + SP ++ LK QGVVL KGA+ D L+TKDVRS +GWQ+ + D V + H RREQS+D+W SNHFE FEV TF + + LRI L A TM E+R L S ++I+
Sbjct: 172 ESTRVPAQPPSDVHQVVRALTAILDPTRKELNLEAARMYDSQVQSGMDPQMACADMVNALGADDSPLVRLLKFTTQGVVLAA----KGAILDKIGTEQHLMTKDVRSADGWQVAITVIDSVVMIRHVRREQSLDLWGDASNHFEYTFEVACTFDTKLERIFATDLRILDLTLADTMESELRRTLTSAFTTGLLIL 362
BLAST of mRNA_D-mesarthrocarpus_Contig9943.3.1 vs. uniprot
Match: A0A7S3V399_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3V399_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 5.710e-17 Identity = 68/212 (32.08%), Postives = 107/212 (50.47%), Query Frame = 1
Query: 382 SLAKDLPRLVHRVTVRT---SRGSLHPPPPGSE-------GAQNPVSIWAMISRLVVALVEELEPESLQDLKQGLTSIASQVTPTTELEMVVPELVNMLGEGSPALKALKMVEQGVVLLGVHIMKGAVTDGLLTKDVRSPEGWQIGFDLFDHVQVYHSRREQ-SVDVWSGPSNHFELDFEVRATFPRDMSELTTASLRIQRLVCAPTMVPEM 984
S KDL RL+ R+++ +G + P SE G V+I +++S L+ E+ ES + + +V E +V E+V ++G S + + LK + Q +VL G MK +T + TKDVR +GW I L + VQV H+R+E + + P N +++++EVR TF R+M +LT A LRI L M E+
Sbjct: 91 STYKDLGRLISRLSLLLRIPGQGDVVLNPIKSERTAGLSGGEAEIVAIVSLLSTLLKFFEEKHIAESFVRQLKEVRERYGEV----ENRHLVKEMVALIGTDSRSARVLKCINQSIVLQGTFEMKSTLTKTVTTKDVREEDGWLIVVTLAEFVQVKHTRKEHCTYATRNEPHNRWDIEWEVRLTFDRNMEDLTAAQLRITNLHLGDAMDEEV 298
BLAST of mRNA_D-mesarthrocarpus_Contig9943.3.1 vs. uniprot
Match: A0A7S0MTD2_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MTD2_9CRYP) HSP 1 Score: 72.8 bits (177), Expect = 7.350e-12 Identity = 44/140 (31.43%), Postives = 74/140 (52.86%), Query Frame = 1
Query: 553 LQDLKQGLTSIASQVTPTTELEMVVPELVNMLGEGSPALKALKMVEQGVVLLGVHIMKGAVT--------DGLLTKDVRSPEGWQIGFDLFDH-VQVYHSRREQSVDVWSGPSNHFELDFEVRATFPRDMSELTTASLRI 945
L+ +K T+ +Q +LE + EL + L E P ++ K++ Q + + +K + D L+TKDVRS +GW+I D+ DH + V H RREQS+ + P + + + + FPRDM++LT +L +
Sbjct: 3 LEAIKHFETTAGNQ----PDLEPYIRELFSSLDETGPTIRVFKLINQAALAAAITPLKLSAASRSANLRADMLMTKDVRSADGWRISIDIGDHEICVTHIRREQSLSGEASPEG-WSMTWRLAIFFPRDMADLTRTTLEV 137
BLAST of mRNA_D-mesarthrocarpus_Contig9943.3.1 vs. uniprot
Match: A0A152A9J0_9MYCE (Uncharacterized protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152A9J0_9MYCE) HSP 1 Score: 73.2 bits (178), Expect = 5.160e-11 Identity = 44/129 (34.11%), Postives = 73/129 (56.59%), Query Frame = 1
Query: 652 EGSPALKALKMVEQGVVLLGVHIMKGAVTDGL--LTKDVRSPEGWQIG-FDLFDHVQVYHSRREQSVDVWSGPSNHFELDFEVRATFPRDMSELTTASLRIQRLVCAPTMVPEMRLELESRLLGDVIIV 1029
E S +K LK+V Q ++ +G +K V L +TKD+R P GWQI F+ D V V HSR+E+S+ + P F+L++++ T +D+SE+T+ +L+I L T + + E+ +L + V
Sbjct: 167 EQSKVVKILKLVHQNIIYVGCFEIKVKVPFLLTHMTKDMRGPNGWQISIFEGKDTVTVTHSRQEESLPT-APPDQQFQLEWQLHITLNKDLSEITSVTLKIVNLSFKETTSQQFKDEINRKLCSGNLFV 294
BLAST of mRNA_D-mesarthrocarpus_Contig9943.3.1 vs. uniprot
Match: L8GWR0_ACACA (Uncharacterized protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GWR0_ACACA) HSP 1 Score: 70.5 bits (171), Expect = 9.120e-10 Identity = 51/183 (27.87%), Postives = 81/183 (44.26%), Query Frame = 1
Query: 463 GSEGAQNPVSIWAMISRLVVALVEELEP-ESLQDLKQGLTSIASQVTPTTELEMVVPELVNMLGEGSPALKALKMVEQGVVLLGVHIMKGAVTDGLLTKDVRSPEGWQIGFDLFDH-VQVYHSRREQSVDVWSG-PSNHFELDFEVRATFPRDMSELTTASLRIQRLVCAPTMVPEMRLELES 1002
G G + ++ +S LV + E LEP E+ +K T T ++ + + G G LK + QGV+L +K VT +LTKDVR+ +GW++ L + V H+RRE S+ P N F ++ + F ++EL LR+ L P E + +L
Sbjct: 242 GINGRSARMHLFETLSSLVCRIAEALEPRETALQVKNSFDFYKKNGTAETMDMGMIMQAILKNGVGPRTESILKAIHQGVILTTAFEIKHKVTKSILTKDVRTKDGWRVHVHLAPNGAVVTHTRREMSIGARGPEPENEFVFEWRLSMFFNAALTELEAVKLRLTDLQFGPQTTAENKQKLNQ 424 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9943.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig9943.3.1 >prot_D-mesarthrocarpus_Contig9943.3.1 ID=prot_D-mesarthrocarpus_Contig9943.3.1|Name=mRNA_D-mesarthrocarpus_Contig9943.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=227bp MWRRPALSGGSLAKDLPRLVHRVTVRTSRGSLHPPPPGSEGAQNPVSIWAback to top mRNA from alignment at D-mesarthrocarpus_Contig9943:2169..4583+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig9943.3.1 ID=mRNA_D-mesarthrocarpus_Contig9943.3.1|Name=mRNA_D-mesarthrocarpus_Contig9943.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2415bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9943:2169..4583+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9943:2169..4583+ >mRNA_D-mesarthrocarpus_Contig9943.3.1 ID=mRNA_D-mesarthrocarpus_Contig9943.3.1|Name=mRNA_D-mesarthrocarpus_Contig9943.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=681bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9943:2169..4583+ (Discosporangium mesarthrocarpum MT17_79)back to top |