mRNA_D-mesarthrocarpus_Contig993.5.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig993.5.1 vs. uniprot
Match: A0A6H5LHQ7_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LHQ7_9PHAE) HSP 1 Score: 164 bits (416), Expect = 6.320e-42 Identity = 93/245 (37.96%), Postives = 143/245 (58.37%), Query Frame = 3
Query: 216 GQLWEYNRCGFGLKILPEVFVSYVNRALGHLKRQG-VDNWLDD*LNYSASFDAHLIIFNAVSSHLKDYGLWINFAKSLWCQTSLEFCGMTVSRDGLRPSPTKVLAVTVLAPPRTEDALRAFLGMICYLREFVKDYSTIAAPLIDLLFDASYS------RRTRFLGLPADASVHVVERQSSHPRGTS---FTEFALHTDASSEGAGVVRNQVLGDDRERVFANASHPWSRSDSRRSATERQCMTVL 920
G+L+E+ RCGFGL +P VF +++ L + +G V+ WLDD L +SA+ + H+ + V L+ G ++F KS++C + +EF G V R G+RP+P+K+ AV L P T +RAFLG+ YLR FV D+ST+ AP+ DLL D ++S RR + +A V++ +HP + F LHTDAS AG V Q + ++RE ASH ++R++ + SA +R+ + VL
Sbjct: 235 GRLYEFTRCGFGLTTIPAVFSAHLGDTLRPTENKGGVERWLDDILLHSATLEEHMALIEEVFDLLQGVGYSVHFKKSMFCMSEVEFLGAMVGRSGVRPAPSKIRAVQELEMPATVGEVRAFLGLAGYLRGFVPDFSTLTAPITDLLRDKAFSSKRARNRRVPWGAAQIEAFQAVIKALVTHPVLAAPDWHLPFTLHTDASELAAGAVLTQPV-ENREAPLGYASHRFTRAEEKLSANDREVLGVL 478
BLAST of mRNA_D-mesarthrocarpus_Contig993.5.1 vs. uniprot
Match: A0A6H5KHG6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG6_9PHAE) HSP 1 Score: 164 bits (416), Expect = 6.950e-42 Identity = 105/311 (33.76%), Postives = 165/311 (53.05%), Query Frame = 3
Query: 18 NSSVVSGLSATHFPDFDR*WGTRRSSEYF*SACGCGVLFLPRLSFQVFPDCDWRGGSPQDCLSGRAGQLWEYNRCGFGLKILPEVFVSYVNRALGHLKRQG-VDNWLDD*LNYSASFDAHLIIFNAVSSHLKDYGLWINFAKSLWCQTSLEFCGMTVSRDGLRPSPTKVLAVTVLAPPRTEDALRAFLGMICYLREFVKDYSTIAAPLIDLLFDASYS-RRTRFLGLP----ADASVHVVERQSSHPRGTSFTE----FALHTDASSEGAGVVRNQVLGDDRERVFANASHPWSRSDSRRSATERQCMTVL 920
NS + L++ H DR R S++F +L LP+ Q+ R P+ G+L+++ RC FGL +P VF + + L + +G ++ WLDD L +S + + HL + V L++ G ++F KSL+C +EF G+ V R G+RP P+K+ A+T + P T LR+F+GM +LR+FVKD+S I APL D+L + +S +R R L +P DA+ + R P + F LHTDAS AG V QV+ +D + SH W++S+++R+ T+R+ L
Sbjct: 880 NSGGIGNLASMH----DR----VRKSKWF------TLLDLPQAYHQIPIKPSDR---PKTAFRDARGRLYQFTRCSFGLTTIPAVFSALLGDTLRPTESKGGIERWLDDILIHSETLEEHLKKIDEVLKLLQEAGFSVHFDKSLFCMQEVEFLGVMVGRSGVRPPPSKIKAITEMEKPTTVGGLRSFVGMANFLRDFVKDFSAIVAPLTDILRNKDFSTKRARNLAIPWGEEQDAAHDAIIRALVSPPVLLPPDWELPFTLHTDASERAAGAVLTQVV-EDHDTAIGFGSHRWTQSEAKRAPTDREVRAAL 1172
BLAST of mRNA_D-mesarthrocarpus_Contig993.5.1 vs. uniprot
Match: A0A6H5KNQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ8_9PHAE) HSP 1 Score: 125 bits (313), Expect = 3.250e-28 Identity = 69/209 (33.01%), Postives = 110/209 (52.63%), Query Frame = 3
Query: 126 VLFLPRLSFQVFPDCDWRGGSPQDCLSGRAGQLWEYNRCGFGLKILPEVFVSYVNRALGHLKRQG-VDNWLDD*LNYSASFDAHLIIFNAVSSHLKDYGLWINFAKSLWCQTSLEFCGMTVSRDGLRPSPTKVLAVTVLAPPRTEDALRAFLGMICYLREFVKDYSTIAAPLIDLLFDASYSRRTRFLGLPADASVHVVERQSSHPRGT 749
+L LP+ Q+ R P+ G+L+ +NRC FGL +P VF + + L ++ G V+ WLDD L ++ S + H + V L+ G ++F KSL+C+ +EF G+ V R G+RP +K+ +T + P T LR+F+GM +LR+FVKD+S I AP+ D+L + ++ H + +HP GT
Sbjct: 292 LLDLPQAYHQIAIKASDR---PKTAFRDARGRLYHFNRCSFGLTTIPAVFSALLGNTLRPVESGGCVERWLDDILIHTESLEEHFKVLEEVLDLLQKAGYTVHFRKSLFCRAEVEFPGVMVGRSGVRPPLSKIKPLTEMESPATVGELRSFVGMANFLRDFVKDFSAIIAPITDILRNMNFQ--------------HQASEEQTHPVGT 483
BLAST of mRNA_D-mesarthrocarpus_Contig993.5.1 vs. uniprot
Match: A0A821E3S9_9BILA (RNA-directed DNA polymerase n=7 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A821E3S9_9BILA) HSP 1 Score: 122 bits (307), Expect = 1.930e-27 Identity = 83/243 (34.16%), Postives = 128/243 (52.67%), Query Frame = 3
Query: 222 LWEYNRCGFGLKILPEVFVSYVNRALGHLKRQGVDNWLDD*LNYSASFDAHLIIFNAVSSHLKDYGLWINFAKSLWCQTSLEFCGMTVSRDGLRPSPTKVLAVTVLAPPRTEDALRAFLGMICYLREFVKDYSTIAAPLIDLLFDASYSRRTRFLGLPADA----SVHVVERQS-SHPRGTSFTE-FALHTDASSEGAGVVRNQVLGDD----RERVFANASHPWSRSDSRRSATERQCMTVL 920
L+ + FGL P F ++ LG LK +LDD + YS+SF+ HL V +++ GL + K +C+T L++ G VS+DG++P P K+ AV P A+R+FLG+ Y R F+K+Y+TIA PL+ L ++ S+ ++ DA H++E S+PR F + F L DAS G + Q L DD RE V AS S ++ + +ATER+C+ ++
Sbjct: 527 LFRFRVMPFGLTNAPATFQRLMDLVLGGLKWSCALVYLDDIIVYSSSFEDHLNHLELVLQQIQNSGLTLKINKCHFCKTHLKYLGHIVSKDGIQPDPDKLRAVREYPVPTKLKAVRSFLGLTSYYRRFIKNYATIAEPLLALTRNSD-SKSFQWTQACQDAFELLRQHLIEAPIISYPR---FDQPFILQLDASDVGISAILAQKLVDDDNITREHVIGYASRTLSPAERKYNATERECLAII 765
BLAST of mRNA_D-mesarthrocarpus_Contig993.5.1 vs. uniprot
Match: A0A6H5K3V4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3V4_9PHAE) HSP 1 Score: 121 bits (303), Expect = 7.030e-27 Identity = 82/247 (33.20%), Postives = 131/247 (53.04%), Query Frame = 3
Query: 216 GQLWEYNRCGFGLKILPEVFVSYVNRALGHLKRQGVDNWLDD*LNYSASFDAHLIIFNAVSSHLKDYGLWINFAKSLWCQTSLEFCGMTVSRDGLRPSPTKVLAVTVLAPPRTEDALRAFLGMICYLREFVKDYSTIAAPLIDLLFDASYS-RRTRFLGLP-----ADASVHVVERQSSH-----PRGTSFTEFALHTDASSEGAGVVRNQ-VLGDDRERVFANASHPWSRSDSRRSATERQCMTVL 920
G+L ++N FG+ +P F + + L +GV+NWLDD +SA+F+ HL + V L G NF KS + + +EF G+ + RDG+RP+P+K+ AV LA P +R+FLG+ YLR FV ++S I AP+ ++L + ++S ++ R +P + + ++E ++H P + F +H DAS+ G V Q V G R R S SR+ SA +R+ + VL
Sbjct: 837 GRLLQWNVSSFGITTIPAFFSATLGDDLREEIGKGVENWLDDIGLHSATFEEHLELVRRVVKILIARGYTGNFQKSEFFLSEIEFLGVMLGRDGVRPAPSKIKAVQELAIPTNVGEVRSFLGLAGYLRGFVPNFSAIRAPVSNILRNPAFSSKKARLKKVPWGSEQTEDFLKIIELLTTHSILILPDWSQ--PFTVHADASNLATGAVLTQEVDGGARHRPVGYHSKRLSRAQQNASANDREFLGVL 1081
BLAST of mRNA_D-mesarthrocarpus_Contig993.5.1 vs. uniprot
Match: A0A816MA94_9BILA (Pro-Pol polyprotein n=3 Tax=Rotaria magnacalcarata TaxID=392030 RepID=A0A816MA94_9BILA) HSP 1 Score: 119 bits (298), Expect = 2.940e-26 Identity = 85/253 (33.60%), Postives = 126/253 (49.80%), Query Frame = 3
Query: 189 PQDCLSGRAGQLWEYNRCGFGLKILPEVFVSYVNRALGHLKRQGVDNWLDD*LNYSASFDAHLIIFNAVSSHLKDYGLWINFAKSLWCQTSLEFCGMTVSRDGLRPSPTKVLAVTVLAPPRTEDALRAFLGMICYLREFVKDYSTIAAPLIDLL--FDASYSRRTRFLGLPADASVHVVERQS--SHPRGTSFTE-FALHTDASSEGAGVVRNQVLGDD----RERVFANASHPWSRSDSRRSATERQCMTVL 920
P+ AG L+++ FGL P F ++ LG LK +LDD + YS++F +HL N+V ++ GL ++ +K +C+T L++ G VS+ G+ P P KV AV P +RAFLG+ Y R F+++Y+TIA PLI L D T D H++ + S+P+ F + F L DAS G + Q L DD RE V AS S S+ S TER+C+ ++
Sbjct: 432 PKTAFITHAG-LFQFKVMPFGLTNAPATFQRLMDLVLGGLKWSCALVYLDDIIVYSSTFQSHLQHLNSVLERIQSSGLTLHISKCQFCKTKLKYLGHVVSQSGIEPDPDKVRAVRDYPVPTRIKDVRAFLGLTSYYRRFIRNYATIAEPLISLTRNIDNKPFLWTSSCQQAFDHLRHLLIQAPIISYPQ---FDKPFILQLDASDFGLSAILAQKLVDDDRVKREHVIGYASRTLSSSERHYSPTERECLAIV 680
BLAST of mRNA_D-mesarthrocarpus_Contig993.5.1 vs. uniprot
Match: A0A816EKY2_9BILA (RNA-directed DNA polymerase n=1 Tax=Rotaria sordida TaxID=392033 RepID=A0A816EKY2_9BILA) HSP 1 Score: 119 bits (298), Expect = 3.010e-26 Identity = 82/243 (33.74%), Postives = 127/243 (52.26%), Query Frame = 3
Query: 222 LWEYNRCGFGLKILPEVFVSYVNRALGHLKRQGVDNWLDD*LNYSASFDAHLIIFNAVSSHLKDYGLWINFAKSLWCQTSLEFCGMTVSRDGLRPSPTKVLAVTVLAPPRTEDALRAFLGMICYLREFVKDYSTIAAPLIDLLFDASYSRRTRFLGLPADASVHVVERQS-----SHPRGTSFTE-FALHTDASSEGAGVVRNQVLGDD----RERVFANASHPWSRSDSRRSATERQCMTVL 920
L+ + FGL P F ++ LG LK +LDD + YS+SF+ HL V L++ GL + K +C+T L++ G VS++G++P P K+ AV P A R+FLG+ Y R F+K+Y+TIA PL+ L ++ S+ ++ DA + +R S+PR F + F L DAS G + Q L D+ RE V A AS S ++ + +ATER+C+ ++
Sbjct: 855 LFRFRVMPFGLTNAPATFQRLMDLVLGGLKWSCALVYLDDIIVYSSSFEDHLNHLELVLQQLQNSGLTLKINKCHFCKTHLKYLGHIVSKEGIQPDPDKLRAVREYPVPTKLKAARSFLGLTSYYRRFIKNYATIAEPLLALTRNSD-SKSFQWTQACQDAFELLRQRLIEAPIISYPR---FDQPFILQLDASDVGISAILAQKLVDNDNVTREHVIAYASRTLSSTERKYNATERECLAII 1093
BLAST of mRNA_D-mesarthrocarpus_Contig993.5.1 vs. uniprot
Match: A0A820JNB4_9BILA (Hypothetical protein (Fragment) n=10 Tax=Rotaria magnacalcarata TaxID=392030 RepID=A0A820JNB4_9BILA) HSP 1 Score: 119 bits (297), Expect = 3.310e-26 Identity = 85/245 (34.69%), Postives = 118/245 (48.16%), Query Frame = 3
Query: 222 LWEYNRCGFGLKILPEVFVSYVNRALGHLKRQGVDNWLDD*LNYSASFDAHLIIFNAVSSHLKDYGLWINFAKSLWCQTSLEFCGMTVSRDGLRPSPTKVLAVTVLAPPRTEDALRAFLGMICYLREFVKDYSTIAAPLIDLLFDASYSRRTRFLGLPADASVHVVERQS-------SHPRGTSFTE-FALHTDASSEGAGVVRNQVL----GDDRERVFANASHPWSRSDSRRSATERQCMTVL 920
L+ + FGL P F ++ LG LK +LDD + YS SFD HL V ++ GL + K +C+T L++ G VS++G+RP P K+ AV P A+R FLG+ Y R F+K+Y+TIA PLI L +S F A + RQ S+PR F + F L DAS G + Q L G RE V AS S S+ + S TER+C+ ++
Sbjct: 81 LFRFRVMPFGLANAPATFQRLMDLVLGGLKWSCALVYLDDIIVYSTSFDDHLYHLELVLQQIQQSGLTLKIDKCHFCKTQLKYLGHIVSKEGIRPDPDKLNAVREYPVPTKLKAVRTFLGLSSYYRRFIKNYATIAEPLIAL---TRHSDLKSFQWSKACQNSFETLRQRLIEAPIISYPR---FDQPFILQLDASDVGLSAILAQKLIDHDGKVREHVIGYASRTLSASERKYSPTERECLAIV 319
BLAST of mRNA_D-mesarthrocarpus_Contig993.5.1 vs. uniprot
Match: A0A816PII9_9BILA (Hypothetical protein n=1 Tax=Rotaria magnacalcarata TaxID=392030 RepID=A0A816PII9_9BILA) HSP 1 Score: 115 bits (287), Expect = 3.870e-26 Identity = 80/234 (34.19%), Postives = 118/234 (50.43%), Query Frame = 3
Query: 246 FGLKILPEVFVSYVNRALGHLKRQGVDNWLDD*LNYSASFDAHLIIFNAVSSHLKDYGLWINFAKSLWCQTSLEFCGMTVSRDGLRPSPTKVLAVTVLAPPRTEDALRAFLGMICYLREFVKDYSTIAAPLIDLL--FDASYSRRTRFLGLPADASVHVVERQS--SHPRGTSFTE-FALHTDASSEGAGVVRNQVLGDD----RERVFANASHPWSRSDSRRSATERQCMTVL 920
FGL P F ++ LG LK +LDD + YS++F +HL N+V ++ GL ++ +K +C+T L++ G VS+ G+ P P +V AV P +RAFLG+ Y R F+++Y+TIA PLI L D T D H++ + S+P+ F + F L DAS G + Q L DD RE V AS S S+ S TER+C+ ++
Sbjct: 3 FGLTKAPATFQRLMDLVLGGLKWSCALVYLDDIIVYSSTFQSHLQHLNSVLERIQSSGLTLHISKCQFCKTKLKYIGHVVSQSGIEPDPDRVRAVRDYPVPTRIKDVRAFLGLTSYYRRFIRNYATIAEPLISLTRNIDNRPFLWTSSCQQAFDHLRHLLIQAPIISYPQ---FDKPFILQLDASDFGLSAILAQKLVDDDRVKREHVIGYASRTLSSSERHYSPTERECLAIV 233
BLAST of mRNA_D-mesarthrocarpus_Contig993.5.1 vs. uniprot
Match: A0A6H5KAQ6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAQ6_9PHAE) HSP 1 Score: 116 bits (291), Expect = 6.460e-26 Identity = 63/158 (39.87%), Postives = 95/158 (60.13%), Query Frame = 3
Query: 216 GQLWEYNRCGFGLKILPEVFVSYVNRALGHLKRQGVDNWLDD*LNYSASFDAHLIIFNAVSSHLKDYGLWINFAKSLWCQTSLEFCGMTVSRDGLRPSPTKVLAVTVLAPPRTEDALRAFLGMICYLREFVKDYSTIAAPLIDLLFDASY-SRRTRFL 686
G L+E+ R FGL +LP F V ALG + GV +WLDD L + +++ HL V + L+ GL +NF K ++ +S EF G+ + G+ P+P+K+ A+ + P+T + LR FLG+ YLR+FV YS +AAPL D+L + + S+R R L
Sbjct: 291 GMLYEFTRAAFGLTVLPSAFTRRVKSALGIV--DGVFSWLDDILVANETWEEHLAALVLVLTRLRAAGLSVNFPKCIFGASSQEFLGIIIDATGMHPAPSKLEAIANMPRPQTVEDLRTFLGLTGYLRQFVPQYSLVAAPLTDILRNKDFASKRARKL 446 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig993.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig993.5.1 >prot_D-mesarthrocarpus_Contig993.5.1 ID=prot_D-mesarthrocarpus_Contig993.5.1|Name=mRNA_D-mesarthrocarpus_Contig993.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=148bp MTVSRDGLRPSPTKVLAVTVLAPPRTEDALRAFLGMICYLREFVKDYSTIback to top mRNA from alignment at D-mesarthrocarpus_Contig993:11268..12187+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig993.5.1 ID=mRNA_D-mesarthrocarpus_Contig993.5.1|Name=mRNA_D-mesarthrocarpus_Contig993.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=920bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig993:11268..12187+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig993:11268..12187+ >mRNA_D-mesarthrocarpus_Contig993.5.1 ID=mRNA_D-mesarthrocarpus_Contig993.5.1|Name=mRNA_D-mesarthrocarpus_Contig993.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=444bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig993:11268..12187+ (Discosporangium mesarthrocarpum MT17_79)back to top |