mRNA_D-mesarthrocarpus_Contig9908.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9908.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig9908.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9908.1.1 vs. uniprot
Match: D7FNQ1_ECTSI (Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNQ1_ECTSI)

HSP 1 Score: 208 bits (530), Expect = 5.960e-62
Identity = 118/247 (47.77%), Postives = 154/247 (62.35%), Query Frame = 2
Query:  176 FPYAEAHRGRKDVVDEWLRHGGDINSPIS---AEEWTPLMLACACGNFDVVRLLMSCG-AKAGARVCTKVLASHSPLHIASRYGHDEIATLLLDWGAAVDEADTHGLTPLHYAAGNSWPKTVEVLIAAGA--SPSVVSPNGATAIDLAEGEG-----VVILKRGLRMEN------ERALLKAWLESLDCEEYIARFFRSGYDDLRFIATHGLSDDDLDCIGVPLAKLGLRRKLTALHNIDGFIRNSG 865
            FPY E   G    +  WL  GG I++P+    AE WTPL LACA G  ++VR ++  G A+      TKVLAS SPLH+ASRYGH  +A +LL+ GA VD  DT G TPL YAAGN   KT+EVL+ AGA  S S  +P  A A+D+AE  G      ++  R L  E+       R  L +WL  L C E++ RF R+GYDDL+F+A+ GL++ DLDC+GVP  KLGLR+KL A+H ++GF+   G
Sbjct:    6 FPYQETRGGDFSALRHWLSQGGTIDAPLLRSVAETWTPLALACAEGRVELVRAIVEIGGARPSFSAQTKVLASSSPLHVASRYGHAGVAAVLLELGAVVDARDTFGFTPLCYAAGNGHLKTIEVLLEAGADASSSFEAPYAAKALDMAEMAGFDDAATLLRSRALAGEDGGEAVRRRKTLASWLGVLGCREFLGRFLRAGYDDLQFMASQGLTEADLDCVGVPGDKLGLRKKLLAMHGVEGFLNADG 252          
BLAST of mRNA_D-mesarthrocarpus_Contig9908.1.1 vs. uniprot
Match: A0A835YT05_9STRA (A designed full consensus ankyrin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT05_9STRA)

HSP 1 Score: 182 bits (463), Expect = 1.040e-51
Identity = 111/248 (44.76%), Postives = 138/248 (55.65%), Query Frame = 2
Query:  176 FPYAEAHRGRKDVVDEWLRHGGD---INSPISAEEWTPLMLACACGNFDVVRLLMSCGAKAGARVCTKVLASHSPLHIASRYGH--DEIATLLLDWGAAVDEADTHGLTPLHYAAGNSWPKTVEVLIAAGASPSVVSPNGA-TAIDLAE----GEGVVILKRGLRMENERALLKAWLESLDCEEYIARFFRSGYDDLRFIATHGLSDDDLDCIGVPLAKLGLRRKLTALHNIDGFIRNSGDQGTGSSV 889
            FPYA    G       W          N+ ++ E+WTPL LA A GN   V  L+  GA+  +   +KVL  H+PLH+A+RYG   D +A LL   GA    AD+HG+TPLHYAA +      + L++AGAS    S +GA T +D A          +L+     E  RA L AWL SL C  Y   F  +GYDDL FIA HGLS +DLDCIGVP+A+LGLRRKLTALHNI   +R       GSS 
Sbjct:   22 FPYAAVRTGDLLAAASWAYRSNSSDWANARLAGEQWTPLHLAVAEGNHAAVAFLLQHGARPDSIATSKVLPGHTPLHVAARYGSSPDIVAALLAAPGADAGAADSHGMTPLHYAACSGHADCAQQLLSAGASALAPSAHGALTPLDAARLCRHAAVAALLEAAAAREGARAPLAAWLRSLGCGAYARAFAAAGYDDLAFIAAHGLSAEDLDCIGVPMAQLGLRRKLTALHNIAQHLRRGRRASHGSSA 269          
BLAST of mRNA_D-mesarthrocarpus_Contig9908.1.1 vs. uniprot
Match: A0A812P6A8_SYMMI (ANK3 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812P6A8_SYMMI)

HSP 1 Score: 112 bits (281), Expect = 1.750e-26
Identity = 62/162 (38.27%), Postives = 94/162 (58.02%), Query Frame = 2
Query:  386 SPLHIASRYGHDEIATLLLDWGAAVDEADTHGLTPLHYAAGNSWPKTVEVLIAAGASPSVVSPNGATAIDLAEGEG------VVILKRGLRMENERALLKAWLESLDCEEYIARFFRSGYDDLRFIATHGLSDDDLDCIGVPLAKLGLRRKLTALHNIDGFI 853
            +P+HI + YGH +I  +L+      D  D  G T LHYA  N   + V+ L+  GA+ S+ S  G+T + +A+  G      ++  K  +  +      + WL SL    YI+ FF++GYD L F+A HGLSD+D DC+G+P +++GLRRKL  LH I+ F+
Sbjct:    2 TPVHICALYGHVDILVILVT-ATNADIQDQWGFTALHYAVSNRKIQAVQFLLDFGANASLTSSAGSTPLQIAQELGYHEIADILASKVSITEDPAAPQFREWLRSLGAGAYISSFFKAGYD-LAFVAAHGLSDEDCDCVGIPTSQMGLRRKLKTLHKIELFV 161          
BLAST of mRNA_D-mesarthrocarpus_Contig9908.1.1 vs. uniprot
Match: A0A482UJW8_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UJW8_9ARCH)

HSP 1 Score: 71.2 bits (173), Expect = 4.400e-12
Identity = 35/57 (61.40%), Postives = 43/57 (75.44%), Query Frame = 2
Query:  680 SLDCEEYIARFFRSGYDDLRFIATHGLSDDDLDCIGVPLAKLGLRRKLTALHNIDGF 850
            +L   EY+ RF  +GYD L FI THGLSD DLDCIGVP+ K+GLRRK++ LH +D F
Sbjct:    9 TLGGSEYLQRFLDAGYD-LPFIHTHGLSDVDLDCIGVPVNKMGLRRKMSKLHGLDRF 64          
BLAST of mRNA_D-mesarthrocarpus_Contig9908.1.1 vs. uniprot
Match: W9HVG8_FUSOX (Uncharacterized protein n=8 Tax=Fusarium oxysporum TaxID=5507 RepID=W9HVG8_FUSOX)

HSP 1 Score: 66.2 bits (160), Expect = 2.690e-8
Identity = 46/127 (36.22%), Postives = 70/127 (55.12%), Query Frame = 2
Query:  191 AHRGRKDVVDEWLRHGGDINSPISAEEWTPLMLACACGNFDVVRLLMS--CGAKAGARVCTKVLASHSPLHIASRYGHDEIATLLLDWGAAVDEADTHGLTPLHYAAGNSWPKTVEVLIAAGASPSV 565
            A+ G K VV   L    D+    S + WTPLM A    + ++VR ++    G KAG       L +++PLH+AS+ G  EIA+LL+  GA  +  D+ G+TPLH A+ ++  K V +L++    P V
Sbjct:  236 AYCGHKGVVSLLLEKNADLYIKNSLQ-WTPLMTATTMQHLEIVRTILDHKTGWKAGYLERGNHL-NNNPLHVASKTGFYEIASLLIGAGANCNATDSQGMTPLHVASFHNHSKIVALLLSEAPVPVV 360          
BLAST of mRNA_D-mesarthrocarpus_Contig9908.1.1 vs. uniprot
Match: A0A7X3XUE7_9BACT (Uncharacterized protein n=3 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7X3XUE7_9BACT)

HSP 1 Score: 65.9 bits (159), Expect = 2.850e-8
Identity = 45/129 (34.88%), Postives = 69/129 (53.49%), Query Frame = 2
Query:  167 PGQFPYAEA-HRGRKDVVDEWLRHGGDINSPISAEEWTPLMLACACGNFDVVRLLMSCGAKAGARVCTKVLASHSPLHIASRYGHDEIATLLLDWGAAVDEADTHGLTPLHYAAGNSWPKTVEVLIAAG 550
            P + P A+A  RG  + V   LR G D+N+  S +  T L  A +  +  + + L+  GA   A   T  +  ++PLH+ASR GH E+A L+L+ GA  D   + G+T +H+AA     + +E L A G
Sbjct:   43 PTEAPVADAAERGDLEAVRALLRQGADVNTAQS-DGMTALHWAASNNDIAIAKALLYAGATYRA---TTRIGGYTPLHLASRGGHAEVARLILEDGADPDILTSTGVTAMHFAADADAAEVIEALAAHG 167          
BLAST of mRNA_D-mesarthrocarpus_Contig9908.1.1 vs. uniprot
Match: A0A8H6CF23_9LECA (Uncharacterized protein n=1 Tax=Letharia lupina TaxID=560253 RepID=A0A8H6CF23_9LECA)

HSP 1 Score: 65.1 bits (157), Expect = 4.870e-8
Identity = 43/135 (31.85%), Postives = 68/135 (50.37%), Query Frame = 2
Query:  170 GQFPYAEAHR-GRKDVVDEWLRHGGDINSPISAEEWTPLMLACACGNFDVVRLLMSCGAKAGARVCTKVLASHSPLHIASRYGHDEIATLLLDWGAAVDEADTHGLTPLHYAAGNSWPKTVEVLIAAGASPSVVS 571
            G+ P   A R G  D V+  + H  ++N+  +   W PL +  A G+  +V+ L++ GA    ++ +          +  ++ HD+IA  LL  GA VD A   G  PLH AA N+ P TV++L+   A P  V+
Sbjct:  351 GEEPLHRASRAGSTDTVNLLVSHKANVNAE-NGFGWKPLHITVAYGHAAIVQQLVNLGASIEEKMGSTEYKKVDTHFLVDKFDHDDIARFLLSKGAKVDSACGRGWRPLHLAAFNASPATVDMLLQRNAYPLAVT 484          
BLAST of mRNA_D-mesarthrocarpus_Contig9908.1.1 vs. uniprot
Match: A0A673KPF4_9TELE (Ankyrin repeat and EF-hand domain containing 1a n=1 Tax=Sinocyclocheilus rhinocerous TaxID=307959 RepID=A0A673KPF4_9TELE)

HSP 1 Score: 64.7 bits (156), Expect = 5.620e-8
Identity = 44/102 (43.14%), Postives = 58/102 (56.86%), Query Frame = 2
Query:  275 TPLMLACACGNFDVVRLLMSCGAKAGARVCTKVLASHSPLHIASRYGHDEIATLLLDWGAAVDEADTHGLTPLHYAAGNSWPKTVEVLIAAGASPSVVSPNG 580
            TPLM ACA GN++V + L+  GA   A  C +   S + LH A   GH +I  LLL+ GA+VD +  +G TPL  A  +  P  VE LI AGA  + V+  G
Sbjct:  345 TPLMAACASGNYEVAKFLLDNGADVNA--CDQF--SWTSLHHA---GHLDIIQLLLETGASVDPSTLNGATPLMRAIESCRPSCVEYLIKAGAKVNAVNKTG 439          
BLAST of mRNA_D-mesarthrocarpus_Contig9908.1.1 vs. uniprot
Match: UPI0011456B84 (ankyrin repeat and SOCS box protein 9 isoform X2 n=1 Tax=Takifugu rubripes TaxID=31033 RepID=UPI0011456B84)

HSP 1 Score: 62.4 bits (150), Expect = 1.250e-7
Identity = 43/122 (35.25%), Postives = 64/122 (52.46%), Query Frame = 2
Query:  191 AHRGRKDVVDEWLRHGGDINSPISAEEWTPLMLACACGNFDVVRLLMSCGAKAGARVCTKVLASHSPLHIASRYGHDEIATLLLDWGAAVDEADTHGLTPLHYAAGNSWPKTVEVLIAAGAS 556
            A +G  + +D  +RHG D++  I  ++ +PL +AC+  +   VR L+  GA   + V        SPLHIA+R    E+A++LLD GAA    +  G  PL  A  +S    VE L+  G S
Sbjct:  137 AAKGHPECMDPLVRHGADVDQVIE-QQGSPLHVACSNQHLSTVRKLLELGACVNSSV-----RGESPLHIAARLSSPELASVLLDHGAAPSPRNWEGKRPLDLAPPDS---PVERLLRQGGS 249          
BLAST of mRNA_D-mesarthrocarpus_Contig9908.1.1 vs. uniprot
Match: H2TGL5_TAKRU (SOCS box domain-containing protein n=6 Tax=Takifugu TaxID=31032 RepID=H2TGL5_TAKRU)

HSP 1 Score: 61.6 bits (148), Expect = 3.030e-7
Identity = 38/108 (35.19%), Postives = 58/108 (53.70%), Query Frame = 2
Query:  191 AHRGRKDVVDEWLRHGGDINSPISAEEWTPLMLACACGNFDVVRLLMSCGAKAGARVCTKVLASHSPLHIASRYGHDEIATLLLDWGAAVDEADTHGLTPLHYAAGNS 514
            A +G  + +D  +RHG D++  I  ++ +PL +AC+  +   VR L+  GA   + V        SPLHIA+R    E+A++LLD GAA    +  G  PL  A  +S
Sbjct:  120 AAKGHPECMDPLVRHGADVDQVIE-QQGSPLHVACSNQHLSTVRKLLELGACVNSSV-----RGESPLHIAARLSSPELASVLLDHGAAPSPRNWEGKRPLDLAPPDS 221          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9908.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNQ1_ECTSI5.960e-6247.77Chain A, Crystal Structure Of A Designed Full Cons... [more]
A0A835YT05_9STRA1.040e-5144.76A designed full consensus ankyrin n=1 Tax=Tribonem... [more]
A0A812P6A8_SYMMI1.750e-2638.27ANK3 protein n=1 Tax=Symbiodinium microadriaticum ... [more]
A0A482UJW8_9ARCH4.400e-1261.40Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
W9HVG8_FUSOX2.690e-836.22Uncharacterized protein n=8 Tax=Fusarium oxysporum... [more]
A0A7X3XUE7_9BACT2.850e-834.88Uncharacterized protein n=3 Tax=Gemmatimonadetes b... [more]
A0A8H6CF23_9LECA4.870e-831.85Uncharacterized protein n=1 Tax=Letharia lupina Ta... [more]
A0A673KPF4_9TELE5.620e-843.14Ankyrin repeat and EF-hand domain containing 1a n=... [more]
UPI0011456B841.250e-735.25ankyrin repeat and SOCS box protein 9 isoform X2 n... [more]
H2TGL5_TAKRU3.030e-735.19SOCS box domain-containing protein n=6 Tax=Takifug... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9908contigD-mesarthrocarpus_Contig9908:261..1203 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FNQ1
PFAMsAnk_2,SAM_1,SAM_2
Model size943
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons1
Evalue8.35e-64
EggNOG OGsCOG0666@1|root,KOG4177@2759|Eukaryota
Ec32 ortholog descriptionAnkyrin repeat-containing domain
Ec32 orthologEc-01_004680.1
Descriptionspectrin binding
Cds size783
COG categoryI
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791141.2400477-UTR-D-mesarthrocarpus_Contig9908:260..4201680791141.2400477-UTR-D-mesarthrocarpus_Contig9908:260..420Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig9908 261..420 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791141.2588224-CDS-D-mesarthrocarpus_Contig9908:420..12031680791141.2588224-CDS-D-mesarthrocarpus_Contig9908:420..1203Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9908 421..1203 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9908.1.1prot_D-mesarthrocarpus_Contig9908.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9908 421..1203 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9908.1.1

>prot_D-mesarthrocarpus_Contig9908.1.1 ID=prot_D-mesarthrocarpus_Contig9908.1.1|Name=mRNA_D-mesarthrocarpus_Contig9908.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=261bp
MSPGQFPYAEAHRGRKDVVDEWLRHGGDINSPISAEEWTPLMLACACGNF
DVVRLLMSCGAKAGARVCTKVLASHSPLHIASRYGHDEIATLLLDWGAAV
DEADTHGLTPLHYAAGNSWPKTVEVLIAAGASPSVVSPNGATAIDLAEGE
GVVILKRGLRMENERALLKAWLESLDCEEYIARFFRSGYDDLRFIATHGL
SDDDLDCIGVPLAKLGLRRKLTALHNIDGFIRNSGDQGTGSSVSSVSSSS
SSSSSSSSRE*
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mRNA from alignment at D-mesarthrocarpus_Contig9908:261..1203+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9908.1.1 ID=mRNA_D-mesarthrocarpus_Contig9908.1.1|Name=mRNA_D-mesarthrocarpus_Contig9908.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=943bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9908:261..1203+ (Discosporangium mesarthrocarpum MT17_79)
GGAAAGCACAGAAACGGTATCTTTTGGAAAAAGGCAAAGTACATTCTCCA GGAGGCAAGACCAAAGTTGGGGAGCGCTACGTATCTGTGGCCTGCAGGGA CCAATTTGTGTGGCTTAGGTTCTTCTCGGTTAAATTTCCCCAGCGTTGAA ATCGTTTTCTATGAGCCCAGGTCAGTTTCCGTATGCAGAGGCGCACCGGG GTCGCAAAGACGTAGTCGATGAGTGGCTTCGGCACGGAGGTGATATCAAC TCCCCTATTTCCGCTGAGGAGTGGACCCCACTCATGCTGGCGTGTGCTTG TGGAAATTTCGACGTCGTTCGTCTCCTGATGAGTTGCGGAGCAAAAGCGG GAGCCAGAGTGTGCACCAAGGTTCTTGCAAGTCACTCGCCATTGCATATA GCGTCGCGGTACGGACACGACGAGATAGCCACTCTCTTATTGGACTGGGG AGCGGCAGTGGACGAGGCGGACACCCATGGCTTAACCCCTCTACATTACG CCGCCGGAAACAGTTGGCCCAAGACTGTCGAAGTGCTCATTGCCGCTGGG GCCTCCCCCTCCGTGGTGAGTCCAAATGGCGCCACTGCCATCGATTTAGC TGAAGGTGAAGGTGTTGTCATTTTGAAGAGGGGTCTCCGGATGGAAAATG AGCGAGCACTGTTGAAGGCGTGGCTTGAATCTCTCGATTGCGAGGAATAC ATCGCCCGATTTTTCAGGTCTGGTTATGATGACTTAAGGTTTATCGCAAC ACATGGTCTTAGTGATGATGATCTTGACTGCATCGGCGTGCCACTGGCAA AACTCGGACTAAGGCGTAAACTTACGGCCCTCCACAACATCGATGGGTTT ATCCGTAATAGTGGTGACCAGGGAACTGGTAGCAGCGTGAGCAGCGTGAG CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTAGAGAATGA
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9908:261..1203+

>mRNA_D-mesarthrocarpus_Contig9908.1.1 ID=mRNA_D-mesarthrocarpus_Contig9908.1.1|Name=mRNA_D-mesarthrocarpus_Contig9908.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=783bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9908:261..1203+ (Discosporangium mesarthrocarpum MT17_79)
ATGAGCCCAGGTCAGTTTCCGTATGCAGAGGCGCACCGGGGTCGCAAAGA
CGTAGTCGATGAGTGGCTTCGGCACGGAGGTGATATCAACTCCCCTATTT
CCGCTGAGGAGTGGACCCCACTCATGCTGGCGTGTGCTTGTGGAAATTTC
GACGTCGTTCGTCTCCTGATGAGTTGCGGAGCAAAAGCGGGAGCCAGAGT
GTGCACCAAGGTTCTTGCAAGTCACTCGCCATTGCATATAGCGTCGCGGT
ACGGACACGACGAGATAGCCACTCTCTTATTGGACTGGGGAGCGGCAGTG
GACGAGGCGGACACCCATGGCTTAACCCCTCTACATTACGCCGCCGGAAA
CAGTTGGCCCAAGACTGTCGAAGTGCTCATTGCCGCTGGGGCCTCCCCCT
CCGTGGTGAGTCCAAATGGCGCCACTGCCATCGATTTAGCTGAAGGTGAA
GGTGTTGTCATTTTGAAGAGGGGTCTCCGGATGGAAAATGAGCGAGCACT
GTTGAAGGCGTGGCTTGAATCTCTCGATTGCGAGGAATACATCGCCCGAT
TTTTCAGGTCTGGTTATGATGACTTAAGGTTTATCGCAACACATGGTCTT
AGTGATGATGATCTTGACTGCATCGGCGTGCCACTGGCAAAACTCGGACT
AAGGCGTAAACTTACGGCCCTCCACAACATCGATGGGTTTATCCGTAATA
GTGGTGACCAGGGAACTGGTAGCAGCGTGAGCAGCGTGAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGTAGAGAATGA
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