mRNA_D-mesarthrocarpus_Contig99.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig99.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig99.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig99.1.1 vs. uniprot
Match: A0A6H5KIS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIS6_9PHAE)

HSP 1 Score: 226 bits (577), Expect = 2.500e-66
Identity = 141/389 (36.25%), Postives = 206/389 (52.96%), Query Frame = 1
Query:    1 LVRDYRPLNLGLRTDSGGLGNLNGIIDRYSRSEYFTAVDLPLGFFQIPIKEEHKSRTDFRDARGRQWEYERAGSELKILPSVFIVHFERTCGYCWFLCTILG**HIHSFYMLWLGFEVCR*GIEEDKRCQ---VFYYLC*IEVVLRISRFP-RHEDKKSRGRDFSGNG--------GSSAKMQPPQTIGGLCTFLGMTGYFRQFIPQYSQIAAPMIDLLRGKEMAGEQVNRKELDWDAAQKTSFEALKQKVITPPVLGCWFPDWSMTFCLCTDASILGAGAGLSQV*EDGLEHVIAYASHRCSIIDSKRPATELYKCVAMLWAIISSSSILVKLRFTLVTDCSALIWLFMNQDLSHNFFRWAMRLSEYDIDLQWHVGTRNQLSDALSRI 1131
            L  D+R LN  L +DSGGLG++  I D     +YFT +DL  GF Q+ I E+ + +T FRDA G  WE+ RAG  L +LP+ F    +   G            H+   +  WL   +      E+       V   L    + +  ++ P     ++  G      G         + A+M  P T+  L TFLG+TGY RQF+P YS  AAP+ ++LR K  A ++  +  + W  A++ +F++L++ + +P VL   FPD    F L TDAS LG GA L Q   DG+   +A+A+HR    D++R  TE  +C+ +LWA+      L   RF LVTDCSAL WLF +++L     RWA+RL EYD++L+W  G  + + DALSR+
Sbjct:   68 LCIDWRELNKLLVSDSGGLGDMQTIFDGLKGKKYFTQLDLASGFHQMEIAEKDRYKTAFRDADGMLWEFTRAGFGLTVLPAAFTRRVKSALG------------HLAGVFS-WLDDILIASDSWEEHLATLTLVLNRLLAAGLSVNFAKCPFGAASQEFLGMIIDSTGLYPAPSKLDAIARMPRPHTVEELRTFLGLTGYLRQFVPNYSLTAAPLTNILRNKAFASKRARKLPIPWSVAEEDAFQSLRETLASPKVLA--FPDLERPFELHTDASTLGVGASLMQT-IDGVTRAVAFANHRFLQTDARRGLTER-ECMGVLWAVDHFRPYLAGRRFKLVTDCSALTWLFRSRELCPKLHRWALRLMEYDMELEWKAGVEHVVPDALSRL 439          
BLAST of mRNA_D-mesarthrocarpus_Contig99.1.1 vs. uniprot
Match: A0A6H5JQV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQV6_9PHAE)

HSP 1 Score: 229 bits (585), Expect = 1.500e-65
Identity = 142/389 (36.50%), Postives = 205/389 (52.70%), Query Frame = 1
Query:    1 LVRDYRPLNLGLRTDSGGLGNLNGIIDRYSRSEYFTAVDLPLGFFQIPIKEEHKSRTDFRDARGRQWEYERAGSELKILPSVFIVHFERTCGYCWFLCTILG**HIHSFYMLWLGFEVCR*GIEEDKRCQVFYYLC*IEVVLRISRFPR----HEDKKSRGRDFSGNG--------GSSAKMQPPQTIGGLCTFLGMTGYFRQFIPQYSQIAAPMIDLLRGKEMAGEQVNRKELDWDAAQKTSFEALKQKVITPPVLGCWFPDWSMTFCLCTDASILGAGAGLSQV*EDGLEHVIAYASHRCSIIDSKRPATELYKCVAMLWAIISSSSILVKLRFTLVTDCSALIWLFMNQDLSHNFFRWAMRLSEYDIDLQWHVGTRNQLSDALSRI 1131
            L  D+R LN  L +DSGGLG++  I D     +YFT +DL  GF Q+ I E+ + +T FRDA G  WE+ RAG  L +LP+ F    +   G            H+   +  WL   +      E+    +   L  +        F +       ++  G      G         + A+M  P T+  L TFLG+TGY RQF+P YS  AAP+ ++LR K  A ++  +  + W  A++ +F++L++ + +P VL   FPD    F L TDAS LG GA L Q   DG+   +A+ASHR S  D++R  TE  +C+ +LWA+      L   RF LVTDCSAL WLF +++L     RWA+RL EYD++L+W  G  + + DALSR+
Sbjct:  208 LCIDWRELNKLLVSDSGGLGDMQTIFDGLKGKKYFTQLDLASGFHQMEIAEKDRYKTAFRDADGMLWEFTRAGFGLTVLPAAFTRRVKSALG------------HLAGVFS-WLDDILIASDSWEEHLATLTLVLNRLLAAGLSVNFAKCIFGAASQEFLGMIIDSTGLYPAPSKLDAIARMPRPHTVEELRTFLGLTGYLRQFVPNYSLTAAPLTNILRNKAFASKRARKLPIPWSVAEEDAFQSLRETLASPKVLA--FPDLERPFELHTDASTLGVGASLMQT-IDGVTRAVAFASHRFSQTDARRGPTER-ECMGVLWAVDHFRPYLAGRRFKLVTDCSALTWLFRSRELCPKLHRWALRLMEYDMELEWKAGVEHVVPDALSRL 579          
BLAST of mRNA_D-mesarthrocarpus_Contig99.1.1 vs. uniprot
Match: A0A6H5KFK7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFK7_9PHAE)

HSP 1 Score: 229 bits (585), Expect = 7.600e-64
Identity = 142/389 (36.50%), Postives = 205/389 (52.70%), Query Frame = 1
Query:    1 LVRDYRPLNLGLRTDSGGLGNLNGIIDRYSRSEYFTAVDLPLGFFQIPIKEEHKSRTDFRDARGRQWEYERAGSELKILPSVFIVHFERTCGYCWFLCTILG**HIHSFYMLWLGFEVCR*GIEEDKRCQVFYYLC*IEVVLRISRFPR----HEDKKSRGRDFSGNG--------GSSAKMQPPQTIGGLCTFLGMTGYFRQFIPQYSQIAAPMIDLLRGKEMAGEQVNRKELDWDAAQKTSFEALKQKVITPPVLGCWFPDWSMTFCLCTDASILGAGAGLSQV*EDGLEHVIAYASHRCSIIDSKRPATELYKCVAMLWAIISSSSILVKLRFTLVTDCSALIWLFMNQDLSHNFFRWAMRLSEYDIDLQWHVGTRNQLSDALSRI 1131
            L  D+R LN  L +DSGGLG++  I D     +YFT +DL  GF Q+ I E+ + +T FRDA G  WE+ RAG  L +LP+ F    +   G            H+   +  WL   +      E+    +   L  +        F +       ++  G      G         + A+M  P T+  L TFLG+TGY RQF+P YS  AAP+ ++LR K  A ++  +  + W  A++ +F++L++ + +P VL   FPD    F L TDAS LG GA L Q   DG+   +A+ASHR S  D++R  TE  +C+ +LWA+      L   RF LVTDCSAL WLF +++L     RWA+RL EYD++L+W  G  + + DALSR+
Sbjct:  210 LCIDWRELNKLLVSDSGGLGDMQTIFDGLKGKKYFTQLDLASGFHQMEIAEKDRYKTAFRDADGMLWEFTRAGFGLTVLPAAFTRRVKSALG------------HLAGVFS-WLDDILIASDSWEEHLATLTLVLNRLLAAGLSVNFAKCIFGAASQEFLGMIIDSTGLYPAPSKLDAIARMPRPHTVEELRTFLGLTGYLRQFVPNYSLTAAPLTNILRNKAFASKRARKLPIPWSVAEEDAFQSLRETLASPKVLA--FPDLERPFELHTDASTLGVGASLMQT-IDGVTRAVAFASHRFSQTDARRGPTER-ECMGVLWAVDHFRPYLAGRRFKLVTDCSALTWLFRSRELCPKLHRWALRLMEYDMELEWKAGVEHVVPDALSRL 581          
BLAST of mRNA_D-mesarthrocarpus_Contig99.1.1 vs. uniprot
Match: A0A6H5KEH2_9PHAE (RNA-directed DNA polymerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEH2_9PHAE)

HSP 1 Score: 229 bits (585), Expect = 2.340e-63
Identity = 142/389 (36.50%), Postives = 205/389 (52.70%), Query Frame = 1
Query:    1 LVRDYRPLNLGLRTDSGGLGNLNGIIDRYSRSEYFTAVDLPLGFFQIPIKEEHKSRTDFRDARGRQWEYERAGSELKILPSVFIVHFERTCGYCWFLCTILG**HIHSFYMLWLGFEVCR*GIEEDKRCQVFYYLC*IEVVLRISRFPR----HEDKKSRGRDFSGNG--------GSSAKMQPPQTIGGLCTFLGMTGYFRQFIPQYSQIAAPMIDLLRGKEMAGEQVNRKELDWDAAQKTSFEALKQKVITPPVLGCWFPDWSMTFCLCTDASILGAGAGLSQV*EDGLEHVIAYASHRCSIIDSKRPATELYKCVAMLWAIISSSSILVKLRFTLVTDCSALIWLFMNQDLSHNFFRWAMRLSEYDIDLQWHVGTRNQLSDALSRI 1131
            L  D+R LN  L +DSGGLG++  I D     +YFT +DL  GF Q+ I E+ + +T FRDA G  WE+ RAG  L +LP+ F    +   G            H+   +  WL   +      E+    +   L  +        F +       ++  G      G         + A+M  P T+  L TFLG+TGY RQF+P YS  AAP+ ++LR K  A ++  +  + W  A++ +F++L++ + +P VL   FPD    F L TDAS LG GA L Q   DG+   +A+ASHR S  D++R  TE  +C+ +LWA+      L   RF LVTDCSAL WLF +++L     RWA+RL EYD++L+W  G  + + DALSR+
Sbjct:  732 LCIDWRELNKLLVSDSGGLGDMQTIFDGLKGKKYFTQLDLASGFHQMEIAEKDRYKTAFRDADGMLWEFTRAGFGLTVLPAAFTRRVKSALG------------HLAGVFS-WLDDILIASDSWEEHLATLTLVLNRLLAAGLSVNFAKCIFGAASQEFLGMIIDSTGLYPAPSKLDAIARMPRPHTVEELRTFLGLTGYLRQFVPNYSLTAAPLTNILRNKAFASKRARKLPIPWSVAEEDAFQSLRETLASPKVLA--FPDLERPFELHTDASTLGVGASLMQT-IDGVTRAVAFASHRFSQTDARRGPTER-ECMGVLWAVDHFRPYLAGRRFKLVTDCSALTWLFRSRELCPKLHRWALRLMEYDMELEWKAGVEHVVPDALSRL 1103          
BLAST of mRNA_D-mesarthrocarpus_Contig99.1.1 vs. uniprot
Match: A0A6H5LHQ7_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LHQ7_9PHAE)

HSP 1 Score: 216 bits (549), Expect = 8.050e-59
Identity = 146/390 (37.44%), Postives = 209/390 (53.59%), Query Frame = 1
Query:   10 DYRPLNLGLRTDSGGLGNLNGIIDRYSRSEYFTAVDLPLGFFQIPIKEEHKSRTDFRDARGRQWEYERAGSELKILPSVFIVHF-------ERTCGYCWFLCTILG**HIHSFYMLWLGFEVCR*GIEE--DKRCQVFYYLC*IEVVLRISRFPRHEDK-------KSRGRDFSGNGGSSAKMQPPQTIGGLCTFLGMTGYFRQFIPQYSQIAAPMIDLLRGKEMAGEQVNRKELDWDAAQKTSFEALKQKVITPPVLGCWFPDWSMTFCLCTDASILGAGAGLSQV*EDGLEHVIAYASHRCSIIDSKRPATELYKCVAMLWAIISSSSILVKLRFTLVTDCSALIWLFMNQDLSHNFFRWAMRLSEYDIDLQWHVGTRNQLSDALSRI 1131
            DYRPLN   + DSGG+G L  +  R   S +FT +DLP  + Q+ IKE  + +T FRDARGR +E+ R G  L  +P+VF  H        E   G   +L  IL    +HS  +     E     IEE  D    V Y      V  + S F   E +       +S  R       +  +++ P T+G +  FLG+ GY R F+P +S + AP+ DLLR K  + ++   + + W AAQ  +F+A+ + ++T PVL    PDW + F L TDAS L AGA L+Q  E+  E  + YASHR +  + K  A +  + + +L+ I    + L   RFTLVTDC+AL WLF +Q+LS    RW++RL ++DIDL+W  G  +   DALSR+
Sbjct:  175 DYRPLNAVTKKDSGGIGTLATMHHRIKGSNFFTLLDLPSAYHQLSIKEADRHKTAFRDARGRLYEFTRCGFGLTTIPAVFSAHLGDTLRPTENKGGVERWLDDIL----LHSATL-----EEHMALIEEVFDLLQGVGY-----SVHFKKSMFCMSEVEFLGAMVGRSGVRPAPSKIRAVQELEMPATVGEVRAFLGLAGYLRGFVPDFSTLTAPITDLLRDKAFSSKRARNRRVPWGAAQIEAFQAVIKALVTHPVLAA--PDWHLPFTLHTDASELAAGAVLTQPVENR-EAPLGYASHRFTRAEEKLSANDR-EVLGVLYGIEQFHTYLQHRRFTLVTDCAALTWLFTSQNLSSKMHRWSLRLMQFDIDLKWRKGEDHTAPDALSRL 546          
BLAST of mRNA_D-mesarthrocarpus_Contig99.1.1 vs. uniprot
Match: A0A6H5KHG6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG6_9PHAE)

HSP 1 Score: 202 bits (515), Expect = 4.580e-54
Identity = 140/403 (34.74%), Postives = 210/403 (52.11%), Query Frame = 1
Query:    1 LVRDYRPLNLGLRTDSGGLGNLNGIIDRYSRSEYFTAVDLPLGFFQIPIKEEHKSRTDFRDARGRQWEYERAGSELKILPSVFIVHFERTC-------GYCWFLCTILG**HIHSFYMLWLGFEVCR*GIEEDKRCQVFYYLC*IEVVLRISR---FPRHEDK----------------KSRGRDFSGNGGSSAKMQPPQTIGGLCTFLGMTGYFRQFIPQYSQIAAPMIDLLRGKEMAGEQVNRKELDWDAAQKTSFEALKQKVITPPVLGCWFPDWSMTFCLCTDASILGAGAGLSQV*EDGLEHVIAYASHRCSIIDSKRPATELYKCVAMLWAIISSSSILVKLRFTLVTDCSALIWLFMNQDLSHNFFRWAMRLSEYDIDLQWHVGTRNQLSDALSRI 1131
            +  DYRPLN     +SGG+GNL  + DR  +S++FT +DLP  + QIPIK   + +T FRDARGR +++ R    L  +P+VF      T        G   +L  IL    IHS              +EE        +L  I+ VL++ +   F  H DK                +S  R       +  +M+ P T+GGL +F+GM  + R F+  +S I AP+ D+LR K+ + ++     + W   Q  + +A+ + +++PPVL    PDW + F L TDAS   AGA L+QV ED  +  I + SHR +  ++KR  T+  +  A L+ +      L+   FTLVTDCSA+ WLF +Q LS   +R+A+R+ E+ + LQW  GT + + DALSR+
Sbjct:  866 MTLDYRPLNNLTVKNSGGIGNLASMHDRVRKSKWFTLLDLPQAYHQIPIKPSDRPKTAFRDARGRLYQFTRCSFGLTTIPAVFSALLGDTLRPTESKGGIERWLDDIL----IHSE------------TLEE--------HLKKIDEVLKLLQEAGFSVHFDKSLFCMQEVEFLGVMVGRSGVRPPPSKIKAITEMEKPTTVGGLRSFVGMANFLRDFVKDFSAIVAPLTDILRNKDFSTKRARNLAIPWGEEQDAAHDAIIRALVSPPVL--LPPDWELPFTLHTDASERAAGAVLTQVVEDH-DTAIGFGSHRWTQSEAKRAPTDR-EVRAALFGLEHFRIYLLHQPFTLVTDCSAITWLFQSQHLSSTMYRYALRMMEFTMTLQWRKGTEHTIPDALSRL 1240          
BLAST of mRNA_D-mesarthrocarpus_Contig99.1.1 vs. uniprot
Match: A0A6H5K9Z4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9Z4_9PHAE)

HSP 1 Score: 194 bits (492), Expect = 3.970e-53
Identity = 140/471 (29.72%), Postives = 204/471 (43.31%), Query Frame = 1
Query:    1 LVRDYRPLNLGLRTDSGGLGNLNGIIDRYSRSEYFTAVDLPLGFFQIPIKEEHKSRTDFRDARGRQWEYERAGSELKILPSVFIVHFERTCGYCWFLCTILG**HIHSFYMLWLGFEVCR*GIEEDKRCQVFYYLC*IEVVLRISRFPR----HEDKKSRGRDFSGNG--------GSSAKMQPPQTIGGLCTFLGMTGYFRQFIPQYSQIAAPMIDLLRGKEMAGEQVNRKELDWDAAQKTSFEALKQKVITPPVLGCWFPDWSMTFCLCTDASILGAGAGLSQV*E----------------------------------------------------------------------------------DGLEHVIAYASHRCSIIDSKRPATELYKCVAMLWAIISSSSILVKLRFTLVTDCSALIWLFMNQDLSHNFFRWAMRLSEYDIDLQWHVGTRNQLSDALSRI 1131
            L  D+R LN  L +DSG LG++  I D     +YFT +DL  GF Q+ I E+ + +T FRDA G  WE+ RAG  L +LP+ F    +   G            H+   +  WL   +      E+    +   L  +        F +       ++  G      G         + A+M  P T+  L TFLG+TGY RQF+P YS  AAP+ ++LR K  A ++  +  + W  A++ +F++L++ + +P VL   FPD    F L TDAS LG GA L Q  +                                                                                  DG+   +A+ASHR S  D++R  TE  +C+ +LWA+      L   RF LVTDCSAL WLF +++L     RWA+RL EYD++L+W     + + DALSR+
Sbjct:   24 LCIDWRELNTLLVSDSGDLGDMQTIFDTLKGKKYFTQLDLASGFHQMEIAEKDRYKTAFRDADGMLWEFTRAGFGLTVLPAAFTRRVKSALG------------HLAGVFS-WLDDILIASDSWEEHLATLTLVLNRLLAAGLSVNFAKCIFGAASQEFLGMIIDSTGLYPAPSKLDAIARMPRPHTVEELRTFLGLTGYLRQFVPNYSLTAAPLTNILRNKAFASKRARKLPIPWSVAEEDAFQSLRETLASPKVLA--FPDLERPFELHTDASTLGVGASLMQTIDGVTRAVAFASHRFSQTDARRGPTERECMGVLWAVDHFRPYLAGRRFKLVTDCSALTWLFRSRELCPKLHSTLGVGASLMQTIDGVTRAVAFASHRFSQTDARRGPTER-ECMGVLWAVDHFRPYLAGRRFKLVTDCSALTWLFRSRELCPKLHRWALRLMEYDMELEWKAEVEHVVPDALSRL 478          
BLAST of mRNA_D-mesarthrocarpus_Contig99.1.1 vs. uniprot
Match: A0A6H5KBF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBF4_9PHAE)

HSP 1 Score: 192 bits (489), Expect = 1.130e-50
Identity = 133/389 (34.19%), Postives = 188/389 (48.33%), Query Frame = 1
Query:    1 LVRDYRPLNLGLRTDSGGLGNLNGIIDRYSRSEYFTAVDLPLGFFQIPIKEEHKSRTDFRDARGRQWEYERAGSELKILPSVFIVHFERTCGYCWFLCTILG**HIHSFYMLWLGFEVCR*GIEEDKRCQVFYYLC*IEVVLRISRFPR----HEDKKSRGRDFSGNG--------GSSAKMQPPQTIGGLCTFLGMTGYFRQFIPQYSQIAAPMIDLLRGKEMAGEQVNRKELDWDAAQKTSFEALKQKVITPPVLGCWFPDWSMTFCLCTDASILGAGAGLSQV*EDGLEHVIAYASHRCSIIDSKRPATELYKCVAMLWAIISSSSILVKLRFTLVTDCSALIWLFMNQDLSHNFFRWAMRLSEYDIDLQWHVGTRNQLSDALSRI 1131
            L  D+R LN  L  DSGGLG++  I D      YFT +DL  GF QI I E+ + +T FRDA G  +E+ RAG  L +LPS F    +   G             I      WL   +      E+    +   L  +        FP+       ++  G      G         + A M  PQT+  L T                 +AAP+ D+LR K+ A ++  +  + W  A++ +F  L+Q + +P VL   FPD +  F L +DAS +GAGA L Q   DG   +IA+ASH+ S  D++R  TE  +C+ +LW +      L   +F +VTDCSAL WLF +++L     RWA+RL EYDI L+W  G  + L DALSR+
Sbjct:  370 LCIDWRVLNKLLVADSGGLGDMQTIFDGLKGKRYFTQIDLASGFHQIEIAEKDRYKTAFRDADGMLYEFTRAGFGLTVLPSAFTRRVKSALG-------------IVDGVFSWLDDILVANETWEEHLAALVLVLTRLRAAGLSVNFPKCIFGASSQEFLGMIIDATGMHPAPSKLEAIANMPRPQTVEDLRTL----------------VAAPLTDILRNKDFASKRARKLPIQWGQAEEHAFHHLRQCLASPTVLA--FPDPNAPFELHSDASSVGAGATLLQT-IDGTPRIIAFASHKFSRTDARRGPTER-ECMGVLWGVDHFKPYLAGRQFKVVTDCSALTWLFRSRELCPKLHRWALRLMEYDIGLEWRAGVHHVLPDALSRL 725          
BLAST of mRNA_D-mesarthrocarpus_Contig99.1.1 vs. uniprot
Match: A0A6H5JF70_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF70_9PHAE)

HSP 1 Score: 188 bits (477), Expect = 2.370e-50
Identity = 131/390 (33.59%), Postives = 201/390 (51.54%), Query Frame = 1
Query:   10 DYRPLNLGLRTDSGGLGNLNGIIDRYSRSEYFTAVDLPLGFFQIPIKEEHKSRTDFRDARGRQWEYERAGSELKILPSVFIVHFERTCGYCWFLCTILG**HIHSFYMLWLGFEVCR*GIEEDKRCQVFYYLC*IEVVLRISRFPRHEDKKSR------------GRDFSGNGGSSAK----MQPPQTIGGLCTFLGMTGYFRQFIPQYSQIAAPMIDLLRGKEMAGEQVNRKELDWDAAQKTSFEALKQKVITPPVLGCWFPDWSMTFCLCTDASILGAGAGLSQV*EDGLEHVIAYASHRCSIIDSKRPATELYKCVAMLWAIISSSSILVKLRFTLVTDCSALIWLFMNQDLSHNFFRWAMRLSEYDIDLQWHVGTRNQLSDALSRI 1131
            DYR LN  ++ DSGGLG++ G++DR   S++F+++DL   + Q+ ++E  K +T FRD  GR  E  R    +  +P+VF      T G    L  +LG          WL          E+     F  L  +  +L+   +  H  K               GRD +    S  K    M+ P T+G L +FLG+  Y R F+P +S IAAP+ D+LR KE + ++   K +     Q  ++  L +K+ T PVL    P+W   F L TDAS++ AG+ L+Q  E+  E  + YAS R S  + K  + +  + + +L+A+      L   +FTL+TDC+AL+WLF +Q LS    RWA+++  YD+ L+W  GT + + DALSR+
Sbjct:  144 DYRDLNKLIKKDSGGLGDITGMLDRMKGSKFFSSLDLAQAYHQLELEETDKHKTAFRDPTGRLLESNRCAFGITTIPAVF----SATLGDD--LRELLG-----KGLEKWLDDIALHTKTLEEH----FVLLEKVLTILKQKGYTGHFVKSEFLLPELEFLGVMVGRDGTRPAPSKVKAVQEMELPSTVGELRSFLGLANYLRGFVPNFSAIAAPLSDILRNKEFSSKRARNKRVVMGPPQIEAYMKLVEKLTTYPVLV--LPNWLEPFTLHTDASLIAAGSVLTQQVENR-EAPVGYASKRLSRSEEKLSSNDR-EVLGVLYALEHFKVYLQHRQFTLITDCAALMWLFTSQKLSSKMHRWALKMMAYDMVLKWRKGTDHVVPDALSRL 514          
BLAST of mRNA_D-mesarthrocarpus_Contig99.1.1 vs. uniprot
Match: A0A6H5JIH2_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIH2_9PHAE)

HSP 1 Score: 179 bits (455), Expect = 7.070e-50
Identity = 95/210 (45.24%), Postives = 133/210 (63.33%), Query Frame = 1
Query:  502 AKMQPPQTIGGLCTFLGMTGYFRQFIPQYSQIAAPMIDLLRGKEMAGEQVNRKELDWDAAQKTSFEALKQKVITPPVLGCWFPDWSMTFCLCTDASILGAGAGLSQV*EDGLEHVIAYASHRCSIIDSKRPATELYKCVAMLWAIISSSSILVKLRFTLVTDCSALIWLFMNQDLSHNFFRWAMRLSEYDIDLQWHVGTRNQLSDALSRI 1131
            A+M  P T+  L TFLG+TGY RQF+P YS  AAP+ ++LR K  A ++  +  + W AA++ +F+ L++ + +P VL   FPD    F L TDAS LG GA L Q   DG+   +A+ASHR S  D++R  TE  +C+ +LWA+      L   RF LVTDCSAL WLF +++L     RWA+RL EYD++L+W  G  + + DALSR+
Sbjct:  102 ARMPRPHTVEELRTFLGLTGYLRQFVPNYSLTAAPLANILRNKAFASKRARKLPIQWSAAEEDAFQYLRETLASPKVLA--FPDLERPFELHTDASTLGVGASLMQT-IDGVTRAVAFASHRFSQTDARRGHTER-ECMGVLWAVDHFRPYLAGRRFKLVTDCSALTWLFRSRELCPTLHRWALRLMEYDLELEWKAGVEHVVPDALSRL 307          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig99.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KIS6_9PHAE2.500e-6636.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQV6_9PHAE1.500e-6536.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KFK7_9PHAE7.600e-6436.50Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KEH2_9PHAE2.340e-6336.50RNA-directed DNA polymerase n=1 Tax=Ectocarpus sp.... [more]
A0A6H5LHQ7_9PHAE8.050e-5937.44Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KHG6_9PHAE4.580e-5434.74Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K9Z4_9PHAE3.970e-5329.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KBF4_9PHAE1.130e-5034.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JF70_9PHAE2.370e-5033.59Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JIH2_9PHAE7.070e-5045.24Reverse transcriptase domain-containing protein n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig99contigD-mesarthrocarpus_Contig99:7477..9044 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog7070.TC006870-PA
PFAMsRVT_1,Retrotrans_gag,gag-asp_proteas,rve
Model size1146
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
Exons2
Evalue2.51e-14
EggNOG OGsCOG2801@1|root,KOG0017@2759|Eukaryota,38F42@33154|Opisthokonta,3BA5H@33208|Metazoa,3CWAK@33213|Bilateria,41WI3@6656|Arthropoda,3SIRK@50557|Insecta
DescriptionK02A2.6-like
Cds size318
COG categoryO
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791140.0529687-UTR-D-mesarthrocarpus_Contig99:7476..76531680791140.0529687-UTR-D-mesarthrocarpus_Contig99:7476..7653Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig99 7477..7653 -
1680791140.066574-UTR-D-mesarthrocarpus_Contig99:8075..82191680791140.066574-UTR-D-mesarthrocarpus_Contig99:8075..8219Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig99 8076..8219 -
1680791140.0947416-UTR-D-mesarthrocarpus_Contig99:8537..90441680791140.0947416-UTR-D-mesarthrocarpus_Contig99:8537..9044Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig99 8538..9044 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791140.081009-CDS-D-mesarthrocarpus_Contig99:8219..85371680791140.081009-CDS-D-mesarthrocarpus_Contig99:8219..8537Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig99 8220..8537 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig99.1.1prot_D-mesarthrocarpus_Contig99.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig99 8220..8537 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig99.1.1

>prot_D-mesarthrocarpus_Contig99.1.1 ID=prot_D-mesarthrocarpus_Contig99.1.1|Name=mRNA_D-mesarthrocarpus_Contig99.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=106bp
MQPPQTIGGLCTFLGMTGYFRQFIPQYSQIAAPMIDLLRGKEMAGEQVNR
KELDWDAAQKTSFEALKQKVITPPVLGCWFPDWSMTFCLCTDASILGAGA
GLSQV*
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mRNA from alignment at D-mesarthrocarpus_Contig99:7477..9044-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig99.1.1 ID=mRNA_D-mesarthrocarpus_Contig99.1.1|Name=mRNA_D-mesarthrocarpus_Contig99.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1568bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig99:7477..9044- (Discosporangium mesarthrocarpum MT17_79)
TTAGTACGTGACTATCGCCCCCTGAACTTGGGGCTAAGGACAGATAGTGG GGGTCTGGGAAACTTGAATGGTATTATTGACCGTTACTCACGCTCAGAAT ACTTCACCGCCGTAGACCTACCCCTTGGTTTCTTTCAAATCCCCATCAAA GAAGAGCATAAGAGCCGTACAGACTTCCGAGATGCACGTGGACGGCAGTG GGAGTATGAGAGGGCAGGGTCTGAGCTCAAAATCTTGCCCAGTGTATTCA TAGTTCATTTCGAACGCACTTGTGGGTATTGTTGGTTCCTGTGTACAATT CTGGGTTGATGACATATTCATTCATTCTATATGCTTTGGTTAGGATTTGA AGTATGTCGATGAGGTATTGAAGAGGATAAGCGCTGCCAGGTTTTCTATT ATCTCTGCTAAATCGAAGTGGTTTTGCGCATCTCTCGATTTCCTCGGCAT GAAGATAAGAAGTCAAGGGGTAGGGACTTCTCCGGCAACGGTGGAAGCAG TGCAAAAATGCAACCACCGCAAACGATTGGAGGCTTATGCACCTTTCTGG GTATGACGGGGTACTTTCGGCAATTTATTCCACAGTACAGTCAGATAGCA GCCCCAATGATTGATTTACTTCGAGGAAAAGAGATGGCTGGAGAACAGGT CAACAGGAAAGAATTAGACTGGGACGCCGCGCAGAAAACTTCCTTCGAAG CATTAAAACAAAAGGTAATAACCCCGCCGGTTCTCGGTTGTTGGTTCCCG GATTGGAGTATGACCTTCTGTTTGTGTACAGATGCTAGTATTTTGGGGGC AGGCGCAGGACTGTCCCAGGTTTAAGAAGACGGTCTCGAGCATGTAATTG CTTACGCTTCCCATAGATGCTCAATCATTGACAGCAAACGACCCGCAACT GAGTTGTACAAGTGTGTGGCAATGCTCTGGGCAATAATTTCTTCAAGCAG TATATTGGTGAAATTGAGAGTCAAGGTTCGAAAGGAGGGTGGGGATTCTA TATGAAAGAGGTTGTTCGGTCTCTGTTTGATAAACGCGATTAGCCAAATT CGAAGTGTGTGCAGATGGCCCAAATGATTATTTTGGCCGTTTGGTGGGCA AGCACTTTAAAGTTGAAATCACCTGCTTCGACGAACGTCATTCGTTGTGG TGCGTGTTGTGTCTCGCCTTCCCCTTGAAGATAATAAATCGTGAGGCACT GCATTTTTCGCGCCCTTGATCGATGTTCTTATAATACATGCATCGCATGC TGATACAATACGAGTATATATATATAGTACGACAGTACACAATGGATGTA GGTGCGGTGTTAGGACAGCAGAATCCCCTCGAACGTTCACTCTCAATTTC ACCAATATACTGTTTTCAGACAATGTGTATGGGGTAGAAAGTTCACTCTG GTAACAGATTGCTCGGCACTAATATGGCTGTTTATGAACCAAGATCTGAG TCATAATTTCTTTCGCTGGGCTATGCGCCTCTCAGAGTATGACATAGATC TTCAGTGGCACGTGGGTACCAGAAATCAATTGTCTGATGCCCTTTCACGT ATCGTAGAAGGGTTAGAA
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig99:7477..9044-

>mRNA_D-mesarthrocarpus_Contig99.1.1 ID=mRNA_D-mesarthrocarpus_Contig99.1.1|Name=mRNA_D-mesarthrocarpus_Contig99.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=318bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig99:7477..9044- (Discosporangium mesarthrocarpum MT17_79)
ATGCAACCACCGCAAACGATTGGAGGCTTATGCACCTTTCTGGGTATGAC
GGGGTACTTTCGGCAATTTATTCCACAGTACAGTCAGATAGCAGCCCCAA
TGATTGATTTACTTCGAGGAAAAGAGATGGCTGGAGAACAGGTCAACAGG
AAAGAATTAGACTGGGACGCCGCGCAGAAAACTTCCTTCGAAGCATTAAA
ACAAAAGGTAATAACCCCGCCGGTTCTCGGTTGTTGGTTCCCGGATTGGA
GTATGACCTTCTGTTTGTGTACAGATGCTAGTATTTTGGGGGCAGGCGCA
GGACTGTCCCAGGTTTAA
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