mRNA_D-mesarthrocarpus_Contig99.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig99.1.1 vs. uniprot
Match: A0A6H5KIS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIS6_9PHAE) HSP 1 Score: 226 bits (577), Expect = 2.500e-66 Identity = 141/389 (36.25%), Postives = 206/389 (52.96%), Query Frame = 1
Query: 1 LVRDYRPLNLGLRTDSGGLGNLNGIIDRYSRSEYFTAVDLPLGFFQIPIKEEHKSRTDFRDARGRQWEYERAGSELKILPSVFIVHFERTCGYCWFLCTILG**HIHSFYMLWLGFEVCR*GIEEDKRCQ---VFYYLC*IEVVLRISRFP-RHEDKKSRGRDFSGNG--------GSSAKMQPPQTIGGLCTFLGMTGYFRQFIPQYSQIAAPMIDLLRGKEMAGEQVNRKELDWDAAQKTSFEALKQKVITPPVLGCWFPDWSMTFCLCTDASILGAGAGLSQV*EDGLEHVIAYASHRCSIIDSKRPATELYKCVAMLWAIISSSSILVKLRFTLVTDCSALIWLFMNQDLSHNFFRWAMRLSEYDIDLQWHVGTRNQLSDALSRI 1131
L D+R LN L +DSGGLG++ I D +YFT +DL GF Q+ I E+ + +T FRDA G WE+ RAG L +LP+ F + G H+ + WL + E+ V L + + ++ P ++ G G + A+M P T+ L TFLG+TGY RQF+P YS AAP+ ++LR K A ++ + + W A++ +F++L++ + +P VL FPD F L TDAS LG GA L Q DG+ +A+A+HR D++R TE +C+ +LWA+ L RF LVTDCSAL WLF +++L RWA+RL EYD++L+W G + + DALSR+
Sbjct: 68 LCIDWRELNKLLVSDSGGLGDMQTIFDGLKGKKYFTQLDLASGFHQMEIAEKDRYKTAFRDADGMLWEFTRAGFGLTVLPAAFTRRVKSALG------------HLAGVFS-WLDDILIASDSWEEHLATLTLVLNRLLAAGLSVNFAKCPFGAASQEFLGMIIDSTGLYPAPSKLDAIARMPRPHTVEELRTFLGLTGYLRQFVPNYSLTAAPLTNILRNKAFASKRARKLPIPWSVAEEDAFQSLRETLASPKVLA--FPDLERPFELHTDASTLGVGASLMQT-IDGVTRAVAFANHRFLQTDARRGLTER-ECMGVLWAVDHFRPYLAGRRFKLVTDCSALTWLFRSRELCPKLHRWALRLMEYDMELEWKAGVEHVVPDALSRL 439
BLAST of mRNA_D-mesarthrocarpus_Contig99.1.1 vs. uniprot
Match: A0A6H5JQV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQV6_9PHAE) HSP 1 Score: 229 bits (585), Expect = 1.500e-65 Identity = 142/389 (36.50%), Postives = 205/389 (52.70%), Query Frame = 1
Query: 1 LVRDYRPLNLGLRTDSGGLGNLNGIIDRYSRSEYFTAVDLPLGFFQIPIKEEHKSRTDFRDARGRQWEYERAGSELKILPSVFIVHFERTCGYCWFLCTILG**HIHSFYMLWLGFEVCR*GIEEDKRCQVFYYLC*IEVVLRISRFPR----HEDKKSRGRDFSGNG--------GSSAKMQPPQTIGGLCTFLGMTGYFRQFIPQYSQIAAPMIDLLRGKEMAGEQVNRKELDWDAAQKTSFEALKQKVITPPVLGCWFPDWSMTFCLCTDASILGAGAGLSQV*EDGLEHVIAYASHRCSIIDSKRPATELYKCVAMLWAIISSSSILVKLRFTLVTDCSALIWLFMNQDLSHNFFRWAMRLSEYDIDLQWHVGTRNQLSDALSRI 1131
L D+R LN L +DSGGLG++ I D +YFT +DL GF Q+ I E+ + +T FRDA G WE+ RAG L +LP+ F + G H+ + WL + E+ + L + F + ++ G G + A+M P T+ L TFLG+TGY RQF+P YS AAP+ ++LR K A ++ + + W A++ +F++L++ + +P VL FPD F L TDAS LG GA L Q DG+ +A+ASHR S D++R TE +C+ +LWA+ L RF LVTDCSAL WLF +++L RWA+RL EYD++L+W G + + DALSR+
Sbjct: 208 LCIDWRELNKLLVSDSGGLGDMQTIFDGLKGKKYFTQLDLASGFHQMEIAEKDRYKTAFRDADGMLWEFTRAGFGLTVLPAAFTRRVKSALG------------HLAGVFS-WLDDILIASDSWEEHLATLTLVLNRLLAAGLSVNFAKCIFGAASQEFLGMIIDSTGLYPAPSKLDAIARMPRPHTVEELRTFLGLTGYLRQFVPNYSLTAAPLTNILRNKAFASKRARKLPIPWSVAEEDAFQSLRETLASPKVLA--FPDLERPFELHTDASTLGVGASLMQT-IDGVTRAVAFASHRFSQTDARRGPTER-ECMGVLWAVDHFRPYLAGRRFKLVTDCSALTWLFRSRELCPKLHRWALRLMEYDMELEWKAGVEHVVPDALSRL 579
BLAST of mRNA_D-mesarthrocarpus_Contig99.1.1 vs. uniprot
Match: A0A6H5KFK7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFK7_9PHAE) HSP 1 Score: 229 bits (585), Expect = 7.600e-64 Identity = 142/389 (36.50%), Postives = 205/389 (52.70%), Query Frame = 1
Query: 1 LVRDYRPLNLGLRTDSGGLGNLNGIIDRYSRSEYFTAVDLPLGFFQIPIKEEHKSRTDFRDARGRQWEYERAGSELKILPSVFIVHFERTCGYCWFLCTILG**HIHSFYMLWLGFEVCR*GIEEDKRCQVFYYLC*IEVVLRISRFPR----HEDKKSRGRDFSGNG--------GSSAKMQPPQTIGGLCTFLGMTGYFRQFIPQYSQIAAPMIDLLRGKEMAGEQVNRKELDWDAAQKTSFEALKQKVITPPVLGCWFPDWSMTFCLCTDASILGAGAGLSQV*EDGLEHVIAYASHRCSIIDSKRPATELYKCVAMLWAIISSSSILVKLRFTLVTDCSALIWLFMNQDLSHNFFRWAMRLSEYDIDLQWHVGTRNQLSDALSRI 1131
L D+R LN L +DSGGLG++ I D +YFT +DL GF Q+ I E+ + +T FRDA G WE+ RAG L +LP+ F + G H+ + WL + E+ + L + F + ++ G G + A+M P T+ L TFLG+TGY RQF+P YS AAP+ ++LR K A ++ + + W A++ +F++L++ + +P VL FPD F L TDAS LG GA L Q DG+ +A+ASHR S D++R TE +C+ +LWA+ L RF LVTDCSAL WLF +++L RWA+RL EYD++L+W G + + DALSR+
Sbjct: 210 LCIDWRELNKLLVSDSGGLGDMQTIFDGLKGKKYFTQLDLASGFHQMEIAEKDRYKTAFRDADGMLWEFTRAGFGLTVLPAAFTRRVKSALG------------HLAGVFS-WLDDILIASDSWEEHLATLTLVLNRLLAAGLSVNFAKCIFGAASQEFLGMIIDSTGLYPAPSKLDAIARMPRPHTVEELRTFLGLTGYLRQFVPNYSLTAAPLTNILRNKAFASKRARKLPIPWSVAEEDAFQSLRETLASPKVLA--FPDLERPFELHTDASTLGVGASLMQT-IDGVTRAVAFASHRFSQTDARRGPTER-ECMGVLWAVDHFRPYLAGRRFKLVTDCSALTWLFRSRELCPKLHRWALRLMEYDMELEWKAGVEHVVPDALSRL 581
BLAST of mRNA_D-mesarthrocarpus_Contig99.1.1 vs. uniprot
Match: A0A6H5KEH2_9PHAE (RNA-directed DNA polymerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEH2_9PHAE) HSP 1 Score: 229 bits (585), Expect = 2.340e-63 Identity = 142/389 (36.50%), Postives = 205/389 (52.70%), Query Frame = 1
Query: 1 LVRDYRPLNLGLRTDSGGLGNLNGIIDRYSRSEYFTAVDLPLGFFQIPIKEEHKSRTDFRDARGRQWEYERAGSELKILPSVFIVHFERTCGYCWFLCTILG**HIHSFYMLWLGFEVCR*GIEEDKRCQVFYYLC*IEVVLRISRFPR----HEDKKSRGRDFSGNG--------GSSAKMQPPQTIGGLCTFLGMTGYFRQFIPQYSQIAAPMIDLLRGKEMAGEQVNRKELDWDAAQKTSFEALKQKVITPPVLGCWFPDWSMTFCLCTDASILGAGAGLSQV*EDGLEHVIAYASHRCSIIDSKRPATELYKCVAMLWAIISSSSILVKLRFTLVTDCSALIWLFMNQDLSHNFFRWAMRLSEYDIDLQWHVGTRNQLSDALSRI 1131
L D+R LN L +DSGGLG++ I D +YFT +DL GF Q+ I E+ + +T FRDA G WE+ RAG L +LP+ F + G H+ + WL + E+ + L + F + ++ G G + A+M P T+ L TFLG+TGY RQF+P YS AAP+ ++LR K A ++ + + W A++ +F++L++ + +P VL FPD F L TDAS LG GA L Q DG+ +A+ASHR S D++R TE +C+ +LWA+ L RF LVTDCSAL WLF +++L RWA+RL EYD++L+W G + + DALSR+
Sbjct: 732 LCIDWRELNKLLVSDSGGLGDMQTIFDGLKGKKYFTQLDLASGFHQMEIAEKDRYKTAFRDADGMLWEFTRAGFGLTVLPAAFTRRVKSALG------------HLAGVFS-WLDDILIASDSWEEHLATLTLVLNRLLAAGLSVNFAKCIFGAASQEFLGMIIDSTGLYPAPSKLDAIARMPRPHTVEELRTFLGLTGYLRQFVPNYSLTAAPLTNILRNKAFASKRARKLPIPWSVAEEDAFQSLRETLASPKVLA--FPDLERPFELHTDASTLGVGASLMQT-IDGVTRAVAFASHRFSQTDARRGPTER-ECMGVLWAVDHFRPYLAGRRFKLVTDCSALTWLFRSRELCPKLHRWALRLMEYDMELEWKAGVEHVVPDALSRL 1103
BLAST of mRNA_D-mesarthrocarpus_Contig99.1.1 vs. uniprot
Match: A0A6H5LHQ7_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LHQ7_9PHAE) HSP 1 Score: 216 bits (549), Expect = 8.050e-59 Identity = 146/390 (37.44%), Postives = 209/390 (53.59%), Query Frame = 1
Query: 10 DYRPLNLGLRTDSGGLGNLNGIIDRYSRSEYFTAVDLPLGFFQIPIKEEHKSRTDFRDARGRQWEYERAGSELKILPSVFIVHF-------ERTCGYCWFLCTILG**HIHSFYMLWLGFEVCR*GIEE--DKRCQVFYYLC*IEVVLRISRFPRHEDK-------KSRGRDFSGNGGSSAKMQPPQTIGGLCTFLGMTGYFRQFIPQYSQIAAPMIDLLRGKEMAGEQVNRKELDWDAAQKTSFEALKQKVITPPVLGCWFPDWSMTFCLCTDASILGAGAGLSQV*EDGLEHVIAYASHRCSIIDSKRPATELYKCVAMLWAIISSSSILVKLRFTLVTDCSALIWLFMNQDLSHNFFRWAMRLSEYDIDLQWHVGTRNQLSDALSRI 1131
DYRPLN + DSGG+G L + R S +FT +DLP + Q+ IKE + +T FRDARGR +E+ R G L +P+VF H E G +L IL +HS + E IEE D V Y V + S F E + +S R + +++ P T+G + FLG+ GY R F+P +S + AP+ DLLR K + ++ + + W AAQ +F+A+ + ++T PVL PDW + F L TDAS L AGA L+Q E+ E + YASHR + + K A + + + +L+ I + L RFTLVTDC+AL WLF +Q+LS RW++RL ++DIDL+W G + DALSR+
Sbjct: 175 DYRPLNAVTKKDSGGIGTLATMHHRIKGSNFFTLLDLPSAYHQLSIKEADRHKTAFRDARGRLYEFTRCGFGLTTIPAVFSAHLGDTLRPTENKGGVERWLDDIL----LHSATL-----EEHMALIEEVFDLLQGVGY-----SVHFKKSMFCMSEVEFLGAMVGRSGVRPAPSKIRAVQELEMPATVGEVRAFLGLAGYLRGFVPDFSTLTAPITDLLRDKAFSSKRARNRRVPWGAAQIEAFQAVIKALVTHPVLAA--PDWHLPFTLHTDASELAAGAVLTQPVENR-EAPLGYASHRFTRAEEKLSANDR-EVLGVLYGIEQFHTYLQHRRFTLVTDCAALTWLFTSQNLSSKMHRWSLRLMQFDIDLKWRKGEDHTAPDALSRL 546
BLAST of mRNA_D-mesarthrocarpus_Contig99.1.1 vs. uniprot
Match: A0A6H5KHG6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG6_9PHAE) HSP 1 Score: 202 bits (515), Expect = 4.580e-54 Identity = 140/403 (34.74%), Postives = 210/403 (52.11%), Query Frame = 1
Query: 1 LVRDYRPLNLGLRTDSGGLGNLNGIIDRYSRSEYFTAVDLPLGFFQIPIKEEHKSRTDFRDARGRQWEYERAGSELKILPSVFIVHFERTC-------GYCWFLCTILG**HIHSFYMLWLGFEVCR*GIEEDKRCQVFYYLC*IEVVLRISR---FPRHEDK----------------KSRGRDFSGNGGSSAKMQPPQTIGGLCTFLGMTGYFRQFIPQYSQIAAPMIDLLRGKEMAGEQVNRKELDWDAAQKTSFEALKQKVITPPVLGCWFPDWSMTFCLCTDASILGAGAGLSQV*EDGLEHVIAYASHRCSIIDSKRPATELYKCVAMLWAIISSSSILVKLRFTLVTDCSALIWLFMNQDLSHNFFRWAMRLSEYDIDLQWHVGTRNQLSDALSRI 1131
+ DYRPLN +SGG+GNL + DR +S++FT +DLP + QIPIK + +T FRDARGR +++ R L +P+VF T G +L IL IHS +EE +L I+ VL++ + F H DK +S R + +M+ P T+GGL +F+GM + R F+ +S I AP+ D+LR K+ + ++ + W Q + +A+ + +++PPVL PDW + F L TDAS AGA L+QV ED + I + SHR + ++KR T+ + A L+ + L+ FTLVTDCSA+ WLF +Q LS +R+A+R+ E+ + LQW GT + + DALSR+
Sbjct: 866 MTLDYRPLNNLTVKNSGGIGNLASMHDRVRKSKWFTLLDLPQAYHQIPIKPSDRPKTAFRDARGRLYQFTRCSFGLTTIPAVFSALLGDTLRPTESKGGIERWLDDIL----IHSE------------TLEE--------HLKKIDEVLKLLQEAGFSVHFDKSLFCMQEVEFLGVMVGRSGVRPPPSKIKAITEMEKPTTVGGLRSFVGMANFLRDFVKDFSAIVAPLTDILRNKDFSTKRARNLAIPWGEEQDAAHDAIIRALVSPPVL--LPPDWELPFTLHTDASERAAGAVLTQVVEDH-DTAIGFGSHRWTQSEAKRAPTDR-EVRAALFGLEHFRIYLLHQPFTLVTDCSAITWLFQSQHLSSTMYRYALRMMEFTMTLQWRKGTEHTIPDALSRL 1240
BLAST of mRNA_D-mesarthrocarpus_Contig99.1.1 vs. uniprot
Match: A0A6H5K9Z4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9Z4_9PHAE) HSP 1 Score: 194 bits (492), Expect = 3.970e-53 Identity = 140/471 (29.72%), Postives = 204/471 (43.31%), Query Frame = 1
Query: 1 LVRDYRPLNLGLRTDSGGLGNLNGIIDRYSRSEYFTAVDLPLGFFQIPIKEEHKSRTDFRDARGRQWEYERAGSELKILPSVFIVHFERTCGYCWFLCTILG**HIHSFYMLWLGFEVCR*GIEEDKRCQVFYYLC*IEVVLRISRFPR----HEDKKSRGRDFSGNG--------GSSAKMQPPQTIGGLCTFLGMTGYFRQFIPQYSQIAAPMIDLLRGKEMAGEQVNRKELDWDAAQKTSFEALKQKVITPPVLGCWFPDWSMTFCLCTDASILGAGAGLSQV*E----------------------------------------------------------------------------------DGLEHVIAYASHRCSIIDSKRPATELYKCVAMLWAIISSSSILVKLRFTLVTDCSALIWLFMNQDLSHNFFRWAMRLSEYDIDLQWHVGTRNQLSDALSRI 1131
L D+R LN L +DSG LG++ I D +YFT +DL GF Q+ I E+ + +T FRDA G WE+ RAG L +LP+ F + G H+ + WL + E+ + L + F + ++ G G + A+M P T+ L TFLG+TGY RQF+P YS AAP+ ++LR K A ++ + + W A++ +F++L++ + +P VL FPD F L TDAS LG GA L Q + DG+ +A+ASHR S D++R TE +C+ +LWA+ L RF LVTDCSAL WLF +++L RWA+RL EYD++L+W + + DALSR+
Sbjct: 24 LCIDWRELNTLLVSDSGDLGDMQTIFDTLKGKKYFTQLDLASGFHQMEIAEKDRYKTAFRDADGMLWEFTRAGFGLTVLPAAFTRRVKSALG------------HLAGVFS-WLDDILIASDSWEEHLATLTLVLNRLLAAGLSVNFAKCIFGAASQEFLGMIIDSTGLYPAPSKLDAIARMPRPHTVEELRTFLGLTGYLRQFVPNYSLTAAPLTNILRNKAFASKRARKLPIPWSVAEEDAFQSLRETLASPKVLA--FPDLERPFELHTDASTLGVGASLMQTIDGVTRAVAFASHRFSQTDARRGPTERECMGVLWAVDHFRPYLAGRRFKLVTDCSALTWLFRSRELCPKLHSTLGVGASLMQTIDGVTRAVAFASHRFSQTDARRGPTER-ECMGVLWAVDHFRPYLAGRRFKLVTDCSALTWLFRSRELCPKLHRWALRLMEYDMELEWKAEVEHVVPDALSRL 478
BLAST of mRNA_D-mesarthrocarpus_Contig99.1.1 vs. uniprot
Match: A0A6H5KBF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBF4_9PHAE) HSP 1 Score: 192 bits (489), Expect = 1.130e-50 Identity = 133/389 (34.19%), Postives = 188/389 (48.33%), Query Frame = 1
Query: 1 LVRDYRPLNLGLRTDSGGLGNLNGIIDRYSRSEYFTAVDLPLGFFQIPIKEEHKSRTDFRDARGRQWEYERAGSELKILPSVFIVHFERTCGYCWFLCTILG**HIHSFYMLWLGFEVCR*GIEEDKRCQVFYYLC*IEVVLRISRFPR----HEDKKSRGRDFSGNG--------GSSAKMQPPQTIGGLCTFLGMTGYFRQFIPQYSQIAAPMIDLLRGKEMAGEQVNRKELDWDAAQKTSFEALKQKVITPPVLGCWFPDWSMTFCLCTDASILGAGAGLSQV*EDGLEHVIAYASHRCSIIDSKRPATELYKCVAMLWAIISSSSILVKLRFTLVTDCSALIWLFMNQDLSHNFFRWAMRLSEYDIDLQWHVGTRNQLSDALSRI 1131
L D+R LN L DSGGLG++ I D YFT +DL GF QI I E+ + +T FRDA G +E+ RAG L +LPS F + G I WL + E+ + L + FP+ ++ G G + A M PQT+ L T +AAP+ D+LR K+ A ++ + + W A++ +F L+Q + +P VL FPD + F L +DAS +GAGA L Q DG +IA+ASH+ S D++R TE +C+ +LW + L +F +VTDCSAL WLF +++L RWA+RL EYDI L+W G + L DALSR+
Sbjct: 370 LCIDWRVLNKLLVADSGGLGDMQTIFDGLKGKRYFTQIDLASGFHQIEIAEKDRYKTAFRDADGMLYEFTRAGFGLTVLPSAFTRRVKSALG-------------IVDGVFSWLDDILVANETWEEHLAALVLVLTRLRAAGLSVNFPKCIFGASSQEFLGMIIDATGMHPAPSKLEAIANMPRPQTVEDLRTL----------------VAAPLTDILRNKDFASKRARKLPIQWGQAEEHAFHHLRQCLASPTVLA--FPDPNAPFELHSDASSVGAGATLLQT-IDGTPRIIAFASHKFSRTDARRGPTER-ECMGVLWGVDHFKPYLAGRQFKVVTDCSALTWLFRSRELCPKLHRWALRLMEYDIGLEWRAGVHHVLPDALSRL 725
BLAST of mRNA_D-mesarthrocarpus_Contig99.1.1 vs. uniprot
Match: A0A6H5JF70_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF70_9PHAE) HSP 1 Score: 188 bits (477), Expect = 2.370e-50 Identity = 131/390 (33.59%), Postives = 201/390 (51.54%), Query Frame = 1
Query: 10 DYRPLNLGLRTDSGGLGNLNGIIDRYSRSEYFTAVDLPLGFFQIPIKEEHKSRTDFRDARGRQWEYERAGSELKILPSVFIVHFERTCGYCWFLCTILG**HIHSFYMLWLGFEVCR*GIEEDKRCQVFYYLC*IEVVLRISRFPRHEDKKSR------------GRDFSGNGGSSAK----MQPPQTIGGLCTFLGMTGYFRQFIPQYSQIAAPMIDLLRGKEMAGEQVNRKELDWDAAQKTSFEALKQKVITPPVLGCWFPDWSMTFCLCTDASILGAGAGLSQV*EDGLEHVIAYASHRCSIIDSKRPATELYKCVAMLWAIISSSSILVKLRFTLVTDCSALIWLFMNQDLSHNFFRWAMRLSEYDIDLQWHVGTRNQLSDALSRI 1131
DYR LN ++ DSGGLG++ G++DR S++F+++DL + Q+ ++E K +T FRD GR E R + +P+VF T G L +LG WL E+ F L + +L+ + H K GRD + S K M+ P T+G L +FLG+ Y R F+P +S IAAP+ D+LR KE + ++ K + Q ++ L +K+ T PVL P+W F L TDAS++ AG+ L+Q E+ E + YAS R S + K + + + + +L+A+ L +FTL+TDC+AL+WLF +Q LS RWA+++ YD+ L+W GT + + DALSR+
Sbjct: 144 DYRDLNKLIKKDSGGLGDITGMLDRMKGSKFFSSLDLAQAYHQLELEETDKHKTAFRDPTGRLLESNRCAFGITTIPAVF----SATLGDD--LRELLG-----KGLEKWLDDIALHTKTLEEH----FVLLEKVLTILKQKGYTGHFVKSEFLLPELEFLGVMVGRDGTRPAPSKVKAVQEMELPSTVGELRSFLGLANYLRGFVPNFSAIAAPLSDILRNKEFSSKRARNKRVVMGPPQIEAYMKLVEKLTTYPVLV--LPNWLEPFTLHTDASLIAAGSVLTQQVENR-EAPVGYASKRLSRSEEKLSSNDR-EVLGVLYALEHFKVYLQHRQFTLITDCAALMWLFTSQKLSSKMHRWALKMMAYDMVLKWRKGTDHVVPDALSRL 514
BLAST of mRNA_D-mesarthrocarpus_Contig99.1.1 vs. uniprot
Match: A0A6H5JIH2_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIH2_9PHAE) HSP 1 Score: 179 bits (455), Expect = 7.070e-50 Identity = 95/210 (45.24%), Postives = 133/210 (63.33%), Query Frame = 1
Query: 502 AKMQPPQTIGGLCTFLGMTGYFRQFIPQYSQIAAPMIDLLRGKEMAGEQVNRKELDWDAAQKTSFEALKQKVITPPVLGCWFPDWSMTFCLCTDASILGAGAGLSQV*EDGLEHVIAYASHRCSIIDSKRPATELYKCVAMLWAIISSSSILVKLRFTLVTDCSALIWLFMNQDLSHNFFRWAMRLSEYDIDLQWHVGTRNQLSDALSRI 1131
A+M P T+ L TFLG+TGY RQF+P YS AAP+ ++LR K A ++ + + W AA++ +F+ L++ + +P VL FPD F L TDAS LG GA L Q DG+ +A+ASHR S D++R TE +C+ +LWA+ L RF LVTDCSAL WLF +++L RWA+RL EYD++L+W G + + DALSR+
Sbjct: 102 ARMPRPHTVEELRTFLGLTGYLRQFVPNYSLTAAPLANILRNKAFASKRARKLPIQWSAAEEDAFQYLRETLASPKVLA--FPDLERPFELHTDASTLGVGASLMQT-IDGVTRAVAFASHRFSQTDARRGHTER-ECMGVLWAVDHFRPYLAGRRFKLVTDCSALTWLFRSRELCPTLHRWALRLMEYDLELEWKAGVEHVVPDALSRL 307 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig99.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig99.1.1 >prot_D-mesarthrocarpus_Contig99.1.1 ID=prot_D-mesarthrocarpus_Contig99.1.1|Name=mRNA_D-mesarthrocarpus_Contig99.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=106bp MQPPQTIGGLCTFLGMTGYFRQFIPQYSQIAAPMIDLLRGKEMAGEQVNRback to top mRNA from alignment at D-mesarthrocarpus_Contig99:7477..9044- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig99.1.1 ID=mRNA_D-mesarthrocarpus_Contig99.1.1|Name=mRNA_D-mesarthrocarpus_Contig99.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1568bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig99:7477..9044- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig99:7477..9044- >mRNA_D-mesarthrocarpus_Contig99.1.1 ID=mRNA_D-mesarthrocarpus_Contig99.1.1|Name=mRNA_D-mesarthrocarpus_Contig99.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=318bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig99:7477..9044- (Discosporangium mesarthrocarpum MT17_79)back to top |