mRNA_D-mesarthrocarpus_Contig989.9.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig989.9.1
Unique NamemRNA_D-mesarthrocarpus_Contig989.9.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig989.9.1 vs. uniprot
Match: A0A6H5KPS4_9PHAE (Glutathione peroxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPS4_9PHAE)

HSP 1 Score: 179 bits (454), Expect = 2.050e-54
Identity = 84/141 (59.57%), Postives = 102/141 (72.34%), Query Frame = 1
Query:   73 LYDFTVKDASGEDVSLAKYKDKPVVLVVNVASHCGYTDSNYRQLQRLYNDHADKGLEVLAFPCNQFGAQEPGTPNEIAAFVDQHFGVTFPLLAKVDVNGEDTDPLFTWLKEASGDTLGIPWNFSKFLILRGETVSRFSHEV 495
            L DFTV D  G    LA  +  P VL+VNVASHCGYTD +YR+LQ L   H +  L ++AFPCNQFGAQEPGT  EIA+  D  FGVTFP+++K+DVNG  + P+F WLK ASG+   IPWNF+KFL+L G TV R+SHEV
Sbjct:   23 LSDFTVLDGHGNPYPLATLRHVPAVLIVNVASHCGYTDRDYRELQALRAKHDEDQLAIVAFPCNQFGAQEPGTWEEIASLADGKFGVTFPIMSKIDVNGLHSSPIFAWLKAASGNPHDIPWNFTKFLVLCGSTVKRYSHEV 163          
BLAST of mRNA_D-mesarthrocarpus_Contig989.9.1 vs. uniprot
Match: A0A835YHD0_9STRA (Glutathione peroxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHD0_9STRA)

HSP 1 Score: 179 bits (455), Expect = 2.230e-54
Identity = 86/143 (60.14%), Postives = 109/143 (76.22%), Query Frame = 1
Query:   64 AGSLYDFTVKDASGEDVSLAKYKD-KPVVLVVNVASHCGYTDSNYRQLQRLYNDHADKGLEVLAFPCNQFGAQEPGTPNEIAAFVDQHFGVTFPLLAKVDVNGEDTDPLFTWLKEASGDTLGIPWNFSKFLILRGETVSRFSH 489
            AGS+YDFTVK   G DV L+ YK+  PV LVVNVAS CGYTD+NYR+LQ+LY ++ + G  VLAFPCNQFG+QEPG+P +I  F  + +GVTFPL+AKV+VNG+  DPLFT+LKEA+G    + WNFSKFL++ G     +SH
Sbjct:   26 AGSMYDFTVKSIWGVDVPLSAYKETNPVALVVNVASQCGYTDTNYRELQQLYEEYEEDGFIVLAFPCNQFGSQEPGSPADIRDFTTEKYGVTFPLMAKVEVNGDGEDPLFTFLKEATGSG-PLKWNFSKFLVVNGVPRKHYSH 167          
BLAST of mRNA_D-mesarthrocarpus_Contig989.9.1 vs. uniprot
Match: UPI001CB98A71 (probable phospholipid hydroperoxide glutathione peroxidase n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB98A71)

HSP 1 Score: 161 bits (408), Expect = 9.240e-48
Identity = 78/142 (54.93%), Postives = 104/142 (73.24%), Query Frame = 1
Query:   70 SLYDFTVKDASGEDVSLAKYKDKPVVLVVNVASHCGYTDSNYRQLQRLYNDHADKGLEVLAFPCNQFGAQEPGTPNEIAAFVDQHFGVTFPLLAKVDVNGEDTDPLFTWLKEASGDTLG--IPWNFSKFLILR-GETVSRFS 486
            ++YDFTVKD  G+DV L+KYK K V+L+VNVAS CG+T+SNY +L  LY  + D+GLE+LAFPCNQFG+QEPGT  EI  F    F   +P+  KV+VNG+D +PL+ +LK + G  LG  I WNF+KFL+ R G+ V R++
Sbjct:   10 TVYDFTVKDVKGQDVDLSKYKGK-VLLIVNVASQCGFTNSNYPELTTLYQKYKDQGLEILAFPCNQFGSQEPGTNEEIQEFACTRFKAEYPVFGKVNVNGKDAEPLYKFLKSSKGGFLGDSIKWNFTKFLVNRDGQVVDRYA 150          
BLAST of mRNA_D-mesarthrocarpus_Contig989.9.1 vs. uniprot
Match: W7TAD6_9STRA (Glutathione peroxidase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TAD6_9STRA)

HSP 1 Score: 162 bits (409), Expect = 1.730e-47
Identity = 78/149 (52.35%), Postives = 103/149 (69.13%), Query Frame = 1
Query:   58 SLAGSLYDFTVKDASGEDVSLAKYKDKPVVLVVNVASHCGYTDSNYRQLQRLYNDHADKGLEVLAFPCNQFGAQEPGTPNEIAAFVDQHFGVTFPLLAKVDVNGEDTDPLFTWLK-----EASGDTLGIPWNFSKFLILRGETVSRFSH 489
            +L  +LYDF++KD +G+  SL+ YKDKPVVL+VNVAS CGYTDSNYRQLQ L   + D GL+VLA P N+FG QEPG+  EI  F  + + VTFP+ +K+ VNG     L+ WLK     ++S  +  I WNF+KFL++ G  V RF+H
Sbjct:   30 ALPRTLYDFSLKDGTGKTQSLSVYKDKPVVLIVNVASRCGYTDSNYRQLQVLQEKYGDDGLQVLAMPSNEFGGQEPGSDAEILKFTKEKYAVTFPVFSKLLVNGPQASDLYKWLKAETPKDSSSSSADIRWNFTKFLLVNGLPVKRFAH 178          
BLAST of mRNA_D-mesarthrocarpus_Contig989.9.1 vs. uniprot
Match: A0A3R7JUE6_9STRA (Glutathione peroxidase n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JUE6_9STRA)

HSP 1 Score: 162 bits (410), Expect = 1.750e-47
Identity = 80/140 (57.14%), Postives = 99/140 (70.71%), Query Frame = 1
Query:   70 SLYDFTVKDASGEDVSLAKYKDKPVVLVVNVASHCGYTDSNYRQLQRLYNDHADKGLEVLAFPCNQFGAQEPGTPNEIAAFVDQHFGVTFPLLAKVDVNGEDTDPLFTWLK-EASGD-TLGIPWNFSKFLILRGETVSRF 483
            S  DF+V+D  G  VS+ ++   PV+LVVNVAS CGYTD NYR+LQ LY+ H D GL +LAFPCNQFG QEPGTP+EI  F ++ + VTFPL  KVDVNG+ T PLF +LK +  G  T  I WNF+KFLI+  E   R+
Sbjct:   32 SFLDFSVEDLRGRQVSMREFNAFPVILVVNVASECGYTDQNYRELQELYDRHHDDGLMILAFPCNQFGRQEPGTPDEILKFTEEKYHVTFPLFTKVDVNGDKTHPLFKFLKIKLDGFVTNDIKWNFTKFLIVNHEPFKRY 171          
BLAST of mRNA_D-mesarthrocarpus_Contig989.9.1 vs. uniprot
Match: A0A059C2I3_EUCGR (Glutathione peroxidase n=3 Tax=Eucalyptus grandis TaxID=71139 RepID=A0A059C2I3_EUCGR)

HSP 1 Score: 162 bits (410), Expect = 5.090e-47
Identity = 81/150 (54.00%), Postives = 104/150 (69.33%), Query Frame = 1
Query:   46 LVTSSLAGSLYDFTVKDASGEDVSLAKYKDKPVVLVVNVASHCGYTDSNYRQLQRLYNDHADKGLEVLAFPCNQFGAQEPGTPNEIAAFVDQHFGVTFPLLAKVDVNGEDTDPLFTWLKEASGDTLG--IPWNFSKFLILR-GETVSRFS 486
            + + S  GS+YDFTVKDA G DV L  YK K V+L+VNVAS CG T+SNY +L ++Y  + ++GLE+LAFPCNQFGAQEPGT  +I  F    F   +P+  KVDVNGE+ DPL+ +LK + G   G  I WNFSKFLI + G  V R++
Sbjct:   83 MASQSSKGSIYDFTVKDARGNDVDLGSYKGK-VLLIVNVASQCGLTNSNYTELSQVYEKYKNQGLEILAFPCNQFGAQEPGTNEQIVEFACTRFKAEYPIFDKVDVNGENADPLYKFLKSSKGGLFGDNIKWNFSKFLIDKEGNVVDRYA 231          
BLAST of mRNA_D-mesarthrocarpus_Contig989.9.1 vs. uniprot
Match: A0A2U1NPR1_ARTAN (Glutathione peroxidase n=2 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1NPR1_ARTAN)

HSP 1 Score: 159 bits (403), Expect = 5.140e-47
Identity = 78/142 (54.93%), Postives = 103/142 (72.54%), Query Frame = 1
Query:   70 SLYDFTVKDASGEDVSLAKYKDKPVVLVVNVASHCGYTDSNYRQLQRLYNDHADKGLEVLAFPCNQFGAQEPGTPNEIAAFVDQHFGVTFPLLAKVDVNGEDTDPLFTWLKEASGDTLG--IPWNFSKFLILR-GETVSRFS 486
            ++YDFTVKD  G+DV L+KY+ K V+L+VNVAS CG+T+SNY +L  LY  + D+GLEVLAFPCNQFG QEPG+  EI  F    F   +P+ +KV+VNG+D DPL+ +LK + G  LG  I WNF+KFL+ R G  V R++
Sbjct:    8 TVYDFTVKDVKGQDVELSKYRGK-VLLIVNVASQCGFTNSNYPELTTLYQKYKDQGLEVLAFPCNQFGGQEPGSNEEIQEFACTRFKAEYPVFSKVNVNGKDADPLYKFLKSSKGGFLGDTIKWNFTKFLVDREGNVVDRYA 148          
BLAST of mRNA_D-mesarthrocarpus_Contig989.9.1 vs. uniprot
Match: A0A2J6KVR4_LACSA (Glutathione peroxidase n=1 Tax=Lactuca sativa TaxID=4236 RepID=A0A2J6KVR4_LACSA)

HSP 1 Score: 161 bits (408), Expect = 5.600e-47
Identity = 80/142 (56.34%), Postives = 103/142 (72.54%), Query Frame = 1
Query:   70 SLYDFTVKDASGEDVSLAKYKDKPVVLVVNVASHCGYTDSNYRQLQRLYNDHADKGLEVLAFPCNQFGAQEPGTPNEIAAFVDQHFGVTFPLLAKVDVNGEDTDPLFTWLKEASGDTLG--IPWNFSKFLILR-GETVSRFS 486
            S+YDFTVKD  G++V L+KYK K V L+VNVAS CG+T+SNY +L  LY  + D+G EVLAFPCNQFG QEPG+  EI  F    F   +P+ +KV+VNG+D DPL+ +LK + G  LG  I WNF+KFL+ R GE VSR++
Sbjct:    8 SVYDFTVKDVKGQEVELSKYKGK-VSLIVNVASQCGFTNSNYPELTTLYQKYKDQGFEVLAFPCNQFGGQEPGSNEEIQEFACTRFKAEYPVFSKVNVNGKDADPLYKFLKSSKGGFLGDSIKWNFTKFLVNREGEVVSRYA 148          
BLAST of mRNA_D-mesarthrocarpus_Contig989.9.1 vs. uniprot
Match: A0A6P5WVS1_DURZI (Glutathione peroxidase n=4 Tax=Malvaceae TaxID=3629 RepID=A0A6P5WVS1_DURZI)

HSP 1 Score: 159 bits (402), Expect = 6.850e-47
Identity = 78/143 (54.55%), Postives = 102/143 (71.33%), Query Frame = 1
Query:   67 GSLYDFTVKDASGEDVSLAKYKDKPVVLVVNVASHCGYTDSNYRQLQRLYNDHADKGLEVLAFPCNQFGAQEPGTPNEIAAFVDQHFGVTFPLLAKVDVNGEDTDPLFTWLKEASGDTLG--IPWNFSKFLILR-GETVSRFS 486
            GS++DFTVKDA G+DV L+ YK K V+L+VNVAS CG TDSNY +L +LY  + D+GLE+LAFPCNQFG QEPG   +I  F    F   +P+  K+DVNGE+T P++ +LK + G  LG  I WNFSKFL+ + G  V R++
Sbjct:    8 GSVHDFTVKDARGKDVDLSIYKGK-VLLIVNVASQCGLTDSNYTELSKLYEKYKDQGLEILAFPCNQFGGQEPGNNEQILEFACTRFKAEYPIFDKIDVNGENTAPIYKFLKSSKGGILGDSIKWNFSKFLVDKEGHVVDRYA 149          
BLAST of mRNA_D-mesarthrocarpus_Contig989.9.1 vs. uniprot
Match: A0A4D8Z9M0_SALSN (Glutathione peroxidase n=4 Tax=Salvia TaxID=21880 RepID=A0A4D8Z9M0_SALSN)

HSP 1 Score: 159 bits (402), Expect = 7.510e-47
Identity = 77/142 (54.23%), Postives = 104/142 (73.24%), Query Frame = 1
Query:   70 SLYDFTVKDASGEDVSLAKYKDKPVVLVVNVASHCGYTDSNYRQLQRLYNDHADKGLEVLAFPCNQFGAQEPGTPNEIAAFVDQHFGVTFPLLAKVDVNGEDTDPLFTWLKEASGDTLG--IPWNFSKFLILR-GETVSRFS 486
            S++DFTVKDA G+D++L  YK K V+L+VNVAS CG T+SNY +L +LY  + D+GLE+LAFPCNQFG+QEPGT  EI  FV  HF   +P+  KVDVNG +  P++ +LK A G   G  I WNF+KFL+ + G+ V+R++
Sbjct:   10 SIHDFTVKDAKGDDINLNAYKGK-VLLIVNVASQCGLTNSNYTELTQLYQKYKDQGLEILAFPCNQFGSQEPGTNEEIQEFVCTHFKAEYPVFDKVDVNGSNAAPIYKFLKSAKGSMFGDGIKWNFAKFLVDKDGQVVNRYA 150          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig989.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KPS4_9PHAE2.050e-5459.57Glutathione peroxidase n=2 Tax=Ectocarpus TaxID=28... [more]
A0A835YHD0_9STRA2.230e-5460.14Glutathione peroxidase n=1 Tax=Tribonema minus Tax... [more]
UPI001CB98A719.240e-4854.93probable phospholipid hydroperoxide glutathione pe... [more]
W7TAD6_9STRA1.730e-4752.35Glutathione peroxidase n=2 Tax=Monodopsidaceae Tax... [more]
A0A3R7JUE6_9STRA1.750e-4757.14Glutathione peroxidase n=3 Tax=Phytophthora kernov... [more]
A0A059C2I3_EUCGR5.090e-4754.00Glutathione peroxidase n=3 Tax=Eucalyptus grandis ... [more]
A0A2U1NPR1_ARTAN5.140e-4754.93Glutathione peroxidase n=2 Tax=Artemisia annua Tax... [more]
A0A2J6KVR4_LACSA5.600e-4756.34Glutathione peroxidase n=1 Tax=Lactuca sativa TaxI... [more]
A0A6P5WVS1_DURZI6.850e-4754.55Glutathione peroxidase n=4 Tax=Malvaceae TaxID=362... [more]
A0A4D8Z9M0_SALSN7.510e-4754.23Glutathione peroxidase n=4 Tax=Salvia TaxID=21880 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig989contigD-mesarthrocarpus_Contig989:23867..25108 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog36331.EPrPI00000020005
PFAMsGSHPx
Model size495
Max annot lvl121069|Pythiales
Hectar predicted targeting categorysignal peptide
Exons3
Evalue2.25e-51
EggNOG OGsCOG0386@1|root,KOG1651@2759|Eukaryota,1MGPI@121069|Pythiales
DescriptionGlutathione peroxidase
Cds size495
COG categoryO
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791139.4105632-CDS-D-mesarthrocarpus_Contig989:23866..240071680791139.4105632-CDS-D-mesarthrocarpus_Contig989:23866..24007Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig989 23867..24007 +
1680791139.4251695-CDS-D-mesarthrocarpus_Contig989:24213..244261680791139.4251695-CDS-D-mesarthrocarpus_Contig989:24213..24426Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig989 24214..24426 +
1680791139.434995-CDS-D-mesarthrocarpus_Contig989:24967..251081680791139.434995-CDS-D-mesarthrocarpus_Contig989:24967..25108Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig989 24968..25108 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig989.9.1prot_D-mesarthrocarpus_Contig989.9.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig989 23867..25108 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig989.9.1

>prot_D-mesarthrocarpus_Contig989.9.1 ID=prot_D-mesarthrocarpus_Contig989.9.1|Name=mRNA_D-mesarthrocarpus_Contig989.9.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=165bp
MRTAWILSSVIVSLLLVTSSLAGSLYDFTVKDASGEDVSLAKYKDKPVVL
VVNVASHCGYTDSNYRQLQRLYNDHADKGLEVLAFPCNQFGAQEPGTPNE
IAAFVDQHFGVTFPLLAKVDVNGEDTDPLFTWLKEASGDTLGIPWNFSKF
LILRGETVSRFSHEV
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mRNA from alignment at D-mesarthrocarpus_Contig989:23867..25108+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig989.9.1 ID=mRNA_D-mesarthrocarpus_Contig989.9.1|Name=mRNA_D-mesarthrocarpus_Contig989.9.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1242bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig989:23867..25108+ (Discosporangium mesarthrocarpum MT17_79)
ATGAGGACTGCTTGGATTCTTTCGTCCGTCATTGTTAGCCTCCTCCTTGT GACCTCGTCCCTAGCGGGATCGCTCTACGACTTCACCGTGAAGGACGCAT CGGGAGAGGATGTGTCCCTCGCGAAATACAAAGACAAACCGGTGAGGCAG GGGAGCTCTCCCAGGTGACAAACGCCATTAAGAGGACTTCCTTCATCGCA GAAAACTACAAGAAGGTCAACTTGACTGTTTGTCATTTTCATGGTGCAGT TGTAAGATAAACCCCAATTTTGCCTTCCCAGTGTGCGCTATCTTAGACAG AACCACCGCCTTTCTCGCTATTAATCGTTCCCCATCCCCCGTTAAAGGTT GTATTGGTGGTCAACGTCGCAAGCCATTGTGGATACACGGATTCCAATTA CCGACAGCTGCAGCGACTCTACAATGACCATGCGGACAAAGGACTGGAAG TGCTGGCGTTCCCATGCAATCAGTTCGGAGCGCAGGAGCCTGGGACGCCC AACGAGATCGCCGCGTTCGTTGACCAACACTTTGGCGTGACCTTCCCGCT TCTGGCCAAGGTGACCCCTTAAATATCTCAGAGTAGGAGTTGCCGTGGAA AGATGGATCGGCTGGGAAAGCCCACGCCCTCGCGTAAATTAGCGGGGTGG GACATAAACAGGTTTTCCCCCTGTGCGTCCTGGCAAGAAATGTATTTTGC TATGATTTCGTGTTTCATGTTACCCTTTTCTTTGTAAATGCATATGTGAT TTCCTGCCCTCGACCTTTTCCACTCGTACCATCCTGCCTTGCGTTTTGTG ATTCCCCGTGTTTCGTAACCTTCACAGTAGTACAGAAGCAGTGTTCTTCC CTTGTATTTTTTCGTGTGTTGCTCTCTGTCCATCTCCAGTTGTTTTTCGG ATGGTCGCTGTCGATGGCCATTGTTTATTTACGGGTTGCTGTAGGGTACG TGCATACATGTGTGTATGTATGTATCTTAGAGAGCATTCAACCATACCTT CACGTAAGCTTGAGGTACCCTCACTTGCTCCTCTCTTGATCGTTCAAAAG TGACACATGAATCCCGGTCGTTCGCGTGCACTCCACGCGTCCTGGCGACA GGTGGACGTCAACGGTGAGGACACAGACCCCTTGTTTACCTGGCTCAAGG AGGCTTCGGGAGATACACTCGGCATTCCCTGGAATTTTTCCAAGTTCCTT ATCCTCCGAGGAGAGACGGTTTCTCGCTTCTCCCATGAGGTG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig989:23867..25108+

>mRNA_D-mesarthrocarpus_Contig989.9.1 ID=mRNA_D-mesarthrocarpus_Contig989.9.1|Name=mRNA_D-mesarthrocarpus_Contig989.9.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=495bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig989:23867..25108+ (Discosporangium mesarthrocarpum MT17_79)
ATGAGGACTGCTTGGATTCTTTCGTCCGTCATTGTTAGCCTCCTCCTTGT
GACCTCGTCCCTAGCGGGATCGCTCTACGACTTCACCGTGAAGGACGCAT
CGGGAGAGGATGTGTCCCTCGCGAAATACAAAGACAAACCGGTTGTATTG
GTGGTCAACGTCGCAAGCCATTGTGGATACACGGATTCCAATTACCGACA
GCTGCAGCGACTCTACAATGACCATGCGGACAAAGGACTGGAAGTGCTGG
CGTTCCCATGCAATCAGTTCGGAGCGCAGGAGCCTGGGACGCCCAACGAG
ATCGCCGCGTTCGTTGACCAACACTTTGGCGTGACCTTCCCGCTTCTGGC
CAAGGTGGACGTCAACGGTGAGGACACAGACCCCTTGTTTACCTGGCTCA
AGGAGGCTTCGGGAGATACACTCGGCATTCCCTGGAATTTTTCCAAGTTC
CTTATCCTCCGAGGAGAGACGGTTTCTCGCTTCTCCCATGAGGTG
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