mRNA_D-mesarthrocarpus_Contig989.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig989.2.1
Unique NamemRNA_D-mesarthrocarpus_Contig989.2.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig989.2.1 vs. uniprot
Match: D7FRF8_ECTSI (DLH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRF8_ECTSI)

HSP 1 Score: 308 bits (788), Expect = 1.480e-100
Identity = 144/245 (58.78%), Postives = 178/245 (72.65%), Query Frame = 1
Query:    1 MASSACCDAGPPIVSDYEPKGIISNVNGTDTYLIGSGPQAIVIVYDVFGFTPQAKQVCDSLAASGFNVAMPDFFKGNPWKLEHFPAPDKAAFLSWVGTSGDFDTVVRPGVESTMEFLKG-KGAETFGVIGFCWGGAMAMKMAALG-GGDSPIKAAACAHPAFLTEELAAEVKVPMLIMPSKDDPDHLPLKAVLDAKDFGDKCMYKRFDDMHHGFCAARGDWSVPEQAARATECVGMFVNFMKKNM 729
            MAS+ACC AGPP+  DY PKG IS +   DTY +GSGP+A+V+VYD+FGF+PQ KQVCD  AA+GFNVAMPDF KGNPW LE+FP  D++   +W GT+G ++T +RP     +  +K  +GAE  GV GFCWGG +AMK A+L    +  +KA    HPA L+ ELA +VKVP+LIMPS +DPDHLP+K VLD K FGDKC Y+RFDDMHHGFCAARGDW+   QA RA E +  FV F   N+
Sbjct:    1 MASAACCAAGPPVACDYTPKGTISKIGDVDTYFVGSGPKALVVVYDIFGFSPQLKQVCDMFAAAGFNVAMPDFCKGNPWPLENFPPKDRSELGAWFGTTGKWETSIRPTFIPAVAHMKEHRGAEVVGVTGFCWGGMIAMKAASLDPDAEGGVKAGGTVHPAMLSAELAQDVKVPVLIMPSGEDPDHLPVKEVLDKKPFGDKCQYRRFDDMHHGFCAARGDWANAVQATRAAEAIDAFVKFYTANL 245          
BLAST of mRNA_D-mesarthrocarpus_Contig989.2.1 vs. uniprot
Match: A0A835Z8A5_9STRA (Alpha/Beta hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8A5_9STRA)

HSP 1 Score: 283 bits (723), Expect = 8.880e-91
Identity = 139/246 (56.50%), Postives = 171/246 (69.51%), Query Frame = 1
Query:    1 MASSACCDAGPPIVSDYEPKGIISNVNGTDTYLIGSGPQAIVIVYDVFGFTPQAKQVCDSLAASGFNVAMPDFFKGNPWKLEHFPAPDKAAFLSWVGTSGDFDTVVRPGVESTMEFLKGK-GAETFGVIGFCWGGAMAMKMAALGGGDSPIKAAACAHPAFLTEELAAEVKVPMLIMPSKDDPDHLPLKAVLDAKDFGDKCMYKRFDDMHHGFCAARGDWSVPEQAARATECVGMFVNFMKKNMES 735
            MAS ACC AGPPI SDYEPKG I+ +   + Y  GSGP+AI IVYD+FG +PQAKQVCD LA +GF+VAMPDF +G PW LE+FP  D+  F++WVG   DFD V+RP +E     ++   GA+ FG IGFCWGG++A K A   G    + A A  H AF+T EL   V VP+ ++PS DDPD  PLK VLD K FG  C+Y RF+DMHHGFCAARGDWS P  A RA+E V M  +FM KN+++
Sbjct:    1 MASPACCKAGPPISSDYEPKGTIATIGDQEVYFSGSGPRAICIVYDIFGLSPQAKQVCDKLADAGFSVAMPDFARGQPWLLENFPPKDQGEFMAWVGKH-DFDAVIRPDMERVQAHMRETMGAKVFGAIGFCWGGSIATKAACAQG---LVAAGAAVHYAFITPELVEGVCVPLCLLPSGDDPDTAPLKEVLDKKPFGAACVYHRFEDMHHGFCAARGDWSQPLIAQRASEAVAMLSDFMDKNLKA 242          
BLAST of mRNA_D-mesarthrocarpus_Contig989.2.1 vs. uniprot
Match: A0A1Y1Y5T6_9FUNG (Alpha/beta-hydrolase n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Y5T6_9FUNG)

HSP 1 Score: 207 bits (526), Expect = 3.510e-61
Identity = 101/245 (41.22%), Postives = 140/245 (57.14%), Query Frame = 1
Query:    4 ASSACCDAGPPIVSDYEPKGIISNVNGTDTYLIG--SGPQAIVIVYDVFGFTPQAKQVCDSLAAS-GFNVAMPDFFKGNPWKLEHFPAPDKAAFLSWVGTSGDFDTVVRPGVESTMEFLKGKGAETFGVIGFCWGGAMAMKMAALGGGDSPIKAAACAHPAFLTEELAAEVKVPMLIMPSKDDPDHLPLKAVLDAKDFGDKCMYKRFDDMHHGFCAARGDWSVPEQAARATECVGMFVNFMKKNM 729
            A+ ACC   PP+VSDY+PKG I  ++    Y +G     +A+V++YD+FGF P  KQ CD L     F VA+PDFF+G PW        D+ A + W+ + G +D   +P +E   + L   G+  FGV+GFCWG     KM  L   D    AA+  HP+ L +E A   + P+L++PSKD+PD      +L  K FG KC Y  FDDMHHGF AARGD++ P    R TE + +  +F + N+
Sbjct:    3 ANKACCSL-PPVVSDYQPKGSIEKIDDLSVYFVGPKDAKKAVVVIYDIFGFHPNTKQFCDILGEKFNFRVALPDFFRGKPWDHTRMTPEDRPALMQWITSVGSWDNT-KPDLEKVKKHLSSSGSTDFGVVGFCWGA----KMGVLATRDGSFSAASLIHPSLLADEDAELAEAPILLIPSKDEPDLTKFVEILKKKSFGSKCSYHLFDDMHHGFAAARGDYNDPANVKRTTEAIQLTGDFFQNNV 241          
BLAST of mRNA_D-mesarthrocarpus_Contig989.2.1 vs. uniprot
Match: A0A836BBU2_9CHLO (DLH domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A836BBU2_9CHLO)

HSP 1 Score: 203 bits (516), Expect = 1.160e-59
Identity = 105/244 (43.03%), Postives = 146/244 (59.84%), Query Frame = 1
Query:    7 SSACCDAGPPIVSDYEPKGIISNVNGTDTYLIGSGPQAIVIVYDVFGFT-PQAKQVCDSLAASGFNVAMPDFFKGNPWKLEHFPAPDKAAFLSWVGTSGDFDTVVRPGVESTMEFLKGKGAETFGVIGFCWGGAMAMKMAALGGGDSPIKAAACAHPAFLTEE--LAAEVKVPMLIMPSKDDPDHLPLKAVLDAKDFGDKCMYKRFDDMHHGFCAARGDWSVPEQAARATECVGMFVNFMKKNM 729
            S AC  AG P+VS YEPKG  +    TD Y  G+G   +VIV D+FGF   Q  QV D  A +GFNV   D F G PW ++ FP   +  F+ W+G  G +  + +P V + +  LK  GA  FG IGFCWG ++AM+     G ++       AHPA   ++   A +V+ P++++P++ D D  P+KAVLD + +G KC+Y+RFDD  HGF AARGDWS PE AA A + +G+  +F+K  M
Sbjct:    4 SEACTAAGAPVVSSYEPKGTFTKAGSTDVYRSGAGALGLVIVPDIFGFGHKQVFQVADRFAEAGFNVCAIDPFHGKPWTMDKFPPKPEHDFMGWIGREGSWQKL-QPQVAAAVAKLKEAGATKFGCIGFCWGVSIAMQA----GQEATFSGVGGAHPALFGKDAAFAEKVQCPVVLLPAQGDADTAPVKAVLDRRPYGSKCVYQRFDDQTHGFVAARGDWSKPEVAAAAGKAIGIMADFLKHAM 242          
BLAST of mRNA_D-mesarthrocarpus_Contig989.2.1 vs. uniprot
Match: A0A4D9D470_9STRA (DLH domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D470_9STRA)

HSP 1 Score: 200 bits (508), Expect = 1.870e-58
Identity = 108/250 (43.20%), Postives = 152/250 (60.80%), Query Frame = 1
Query:    1 MASSACCDAGPPIVSDYEPKGIISNV-NGTDTYLIGSGPQ----AIVIVYDVFGFTPQAKQVCDSLAASGFNVAMPDFFKGNPWKLEHFPAPDKAAFLSWVGTSGDFDTVVRPGVESTMEFLKGKGAETFGVIGFCWGGAMAMKMAALGGGDSPI-KAAACAHPAFLTEELAAEVKVPMLIMPSKDDPDHLPLKAVLDAKDFGDKCMYKRFDDMHHGFCAARGDWSVPEQAARATECVGMFVNFMKKNME 732
            MA +AC    PP+   Y P G I+ + +G + Y+           ++ V D+FG TPQA QVCD LAA+GF VA PD F+G  W LE FP PD+   + W+G    F+  V+P +   +  L+ KG E FG++GFCWGG    KM+ L   D+ + +A A AHP+F+T E AA V  P+L++PSKD+ D  P    + A+  G +   ++FDDMHHG+ AARGDW  P+Q ARATE +  FV+F  K+++
Sbjct:    1 MACNACMTI-PPVEDSYIPLGQITTITDGLEVYIAAPKDSKTKAGLMYVPDIFGKTPQAFQVCDKLAAAGFWVAFPDVFRGKAWPLEKFPPPDRQELMEWIG-GYPFEGQVKPDIACALALLREKGVERFGIVGFCWGG----KMSTLSSQDAEVFRATASAHPSFVTVEDAALVNCPILLLPSKDEADLTPFIDAVKAR--GVEASQEKFDDMHHGWVAARGDWKDPKQQARATEAIQRFVSFFTKHLK 242          
BLAST of mRNA_D-mesarthrocarpus_Contig989.2.1 vs. uniprot
Match: A0A0L0HMK7_SPIPD (DLH domain-containing protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HMK7_SPIPD)

HSP 1 Score: 197 bits (501), Expect = 4.150e-57
Identity = 102/246 (41.46%), Postives = 147/246 (59.76%), Query Frame = 1
Query:    7 SSACCDAGPPIVSDYEPKGIISNVNGTDTYLIGS-GPQAIVIVYDVFGFTPQAKQVCDSLAASGFNVAMPDFFKGNPWKLEHFPA--PDKAAFLSWVGTSGDFDTVVRPGVESTMEFLKGKGAETFGVIGFCWGGAMAMKMAALGGGDSPIKAAACAHPAFLTEELAAEVKVPMLIMPSKDDPDHLPLKAVLDAKDFGDKCMYKRFDDMHHGFCAARGDWSVPEQAARATECVGMFVNFMKKNMES 735
            S ACC+  PP  S+Y+PKG +S V    TY +G  G +AI+++YD+FGF P   Q  D LAA GF VA PDF++GNPW LE  P   P+  A L         ++ +   + S   +L+  GAE+ G +GFCWG   A++       +  + A+A AHP+ LT E+  +VK P+ ++PSKD+PD +PL   L  K F DK ++ RFDDMHHG+CAAR D+S P  A R+ E + +   F  + +++
Sbjct:   29 SKACCEL-PPFASNYQPKGQVSTVGDLPTYFVGEKGKRAIILIYDIFGFHPNTHQFADELAAKGFFVAEPDFYRGNPWPLEKVPIQLPELMAHLEQHVP----ESRMLADIGSVCRYLRSNGAESIGTLGFCWGAIYAIRANV----EGLVDASAAAHPSRLTVEIVKDVKGPLALLPSKDEPDLIPLMEALKEKPFVDKNVHVRFDDMHHGWCAARSDYSNPANARRSREALQIMARFFDETLQA 265          
BLAST of mRNA_D-mesarthrocarpus_Contig989.2.1 vs. uniprot
Match: A0A1X2HGG9_SYNRA (Alpha/Beta hydrolase protein n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HGG9_SYNRA)

HSP 1 Score: 196 bits (499), Expect = 4.240e-57
Identity = 101/244 (41.39%), Postives = 139/244 (56.97%), Query Frame = 1
Query:    7 SSACCDAGPPIVSDYEPKGIISNVNGTDTYLIG--SGPQAIVIVYDVFGFTPQAKQVCDSLA-ASGFNVAMPDFFKGNPWKLEHFPAPDKAAFLSWVGTSGDFDTVVRPGVESTMEFLKGKGAETFGVIGFCWGGAMAMKMAALGGGDSPIKAAACAHPAFLTEELAAEVKVPMLIMPSKDDPDHLPLKAVLDAKDFGDKCMYKRFDDMHHGFCAARGDWSVPEQAARATECVGMFVNFMKKNM 729
            S ACC   P   S YEP G+I NV     Y++G     +++ ++YD+FGF    KQ CD LA   G+ V MPDFF+G PW        D  + + WVG  G  D VV P +++  +++K +G    G++GFCWG  +A++  A    DS   +A+  HP+F+  + A E   P+L +PSKD+PD     AVL  K FG+ C + RFDDMHHGF AARGDW+      RATE V +  NF K  +
Sbjct:    4 SKACCTIPPVEGSTYEPTGVIENVGDLPVYVVGPKDAKKSVFVIYDIFGFHVNTKQFCDVLANRCGYRVVMPDFFRGEPWSPAKMTPADMPSLMEWVGKVGTID-VVLPQLQAVRDWIKPQGVNQAGIVGFCWGAKIAVQATAK---DSFFGSASLIHPSFVDTKDAEEAGAPILAIPSKDEPDMTEYMAVLAKKPFGNLCEHHRFDDMHHGFAAARGDWNDEVNKKRATEAVQLTANFFKATL 243          
BLAST of mRNA_D-mesarthrocarpus_Contig989.2.1 vs. uniprot
Match: A0A261XVA5_9FUNG (DLH domain-containing protein n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261XVA5_9FUNG)

HSP 1 Score: 192 bits (489), Expect = 1.090e-55
Identity = 106/245 (43.27%), Postives = 145/245 (59.18%), Query Frame = 1
Query:   10 SACCDAGPPIVSDYEPKGIISNVNGTDTYLIG--SGPQAIVIVYDVFGFTPQAKQVCDSLAA-SGFNVAMPDFFKGNPWKLEHFPAPDKAAFLSWVGTSGDFDTVVRPGVESTMEFLKGKGAETFGVIGFCWGGAMAMKMAALGGGDSPIKAAACAHPAFLTEELAAEVKVPMLIMPSKDDPDHLPLKAVLDAKDFGDKCMYKRFDDMHHGFCAARGDWSVPEQAARATECVGMFVNFMKKNMES 735
            SACC   PP+ SDY PKG I  +   D Y +G      AI+++YD+FGF P  KQ  D LA  S  NV MPDFF+G P+  +     DK   +SWV ++G    ++ P +     FL+  GA + GV+GFCWG  +A +  A    DS   AAA  HP+F  +E A +   PML++P+KD+PD       L AK FGDKC ++RFDD+HHGF AARGDWS   QA RAT+ + +   F  +++++
Sbjct:    2 SACCTI-PPVKSDYSPKGEIFQIEDMDVYTVGPKGTKTAILVIYDIFGFHPNTKQFADRLAEHSKVNVIMPDFFRGKPFTEQDLA--DKEKLMSWVQSAGSIKGMM-PDLAKCKNFLQQDGAVSAGVVGFCWGAKIASQATAE---DSFWGAAALIHPSFPAKEDAEKAGGPMLVIPTKDEPDMTEYMNALKAKPFGDKCKHERFDDVHHGFAAARGDWSDETQAKRATQAIDLTSKFFNEHLKA 239          
BLAST of mRNA_D-mesarthrocarpus_Contig989.2.1 vs. uniprot
Match: L8H284_ACACA (Dienelactone hydrolase family protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H284_ACACA)

HSP 1 Score: 190 bits (483), Expect = 9.910e-55
Identity = 102/242 (42.15%), Postives = 146/242 (60.33%), Query Frame = 1
Query:   13 ACCDAGPPIVSDYEPKGIISNVNGTDTYLIG--SGPQAIVIVYDVFGFTPQAKQVCDSLA-ASGFNVAMPDFFKGNPWKLEHFPAPDKAAFLSWVGTSGDFDTVVRPGVESTMEFLKGKGAETFGVIGFCWGGAMAMKMAALGGGDSPIKAAACAHPAFLTEELAAEVKVPMLIMPSKDDPDHLP-LKAVLDAKD-FGDKCMYKRFDDMHHGFCAARGDWSVPEQAARATECVGMFVNFMKK 723
            ACC   PP+ S+Y P+G +  V G + Y +G      AIV +YD+FGF    KQ CD +A A+   V +PDFF+G PW  E     D++  L W+GT G ++ + +P + +T  F + +GA+   + GFCWG  MA   A  G   S   AAA  HP+F T + A  ++VP++ +P+KD+PD +P ++A+ +A     +K  +KRFDD+HHGFCAARGDWS   QA RA E + +  NF KK
Sbjct:    6 ACCSL-PPVKSEYAPQGSVVEVGGIEVYSVGPSDAKAAIVGIYDIFGFHNNTKQFCDLVASATHARVLLPDFFRGAPWTAEKLETHDRSELLKWIGTEGSWEKI-QPSLAATTAFAQKEGAQKIALFGFCWGAKMAWHAAQDG---STYAAAAFIHPSFFTPDDAKFLQVPIINLPTKDEPDMVPYMEALKEASPALHEKSEHKRFDDVHHGFCAARGDWSDELQAQRANEAIKLVANFYKK 242          
BLAST of mRNA_D-mesarthrocarpus_Contig989.2.1 vs. uniprot
Match: A0A1D2MEH3_ORCCI (Putative AIM2 family protein C30D10.14 n=1 Tax=Orchesella cincta TaxID=48709 RepID=A0A1D2MEH3_ORCCI)

HSP 1 Score: 188 bits (477), Expect = 8.460e-54
Identity = 101/244 (41.39%), Postives = 147/244 (60.25%), Query Frame = 1
Query:   13 ACCDAGPPIVSDYEPKGIISNVNGTDTYLI---GSGPQAIVI-VYDVFGFTPQAKQVCDSLAASG-FNVAMPDFFKGNPWKLEHFPAPDKAAFLSWVGTSGDFDTVVRPGVESTMEFLKGKGAETFGVIGFCWGGAMAMKMAALGGGDSPIKAAACAHPAFLTEELAAEVKVPMLIMPSKDDPDHLPLKAVLDAKDFGDKCMYKRFDDMHHGFCAARGDWSVPEQAARATECVGMFVNFMKKNM 729
            ACC   PP+ SDY+ +G    + G D  +       P+ ++I  YD+FG+ P  KQ  D L + G F VAMPDFF+G P+ L++FP  D +  +++V T+G +D VV+  +++ +E  K +GA +FG+ GFCWGG M++K  +       IKAAA  HPAF+    A   K P+L  PSKD+PD LPL  ++  +   +   + RFDDM HGF AARGDW V +Q  RA + + +  NF KK++
Sbjct:    6 ACCTL-PPVSSDYQAQGSEFTL-GDDLKIYETKNKSPKIVLICAYDIFGYHPNTKQFADQLNSCGIFRVAMPDFFRGKPFSLDNFPPKDPSEIMNFVSTTGSWDDVVKKDLQNVIEHYKKEGAVSFGIFGFCWGGKMSIKGVSE---VDDIKAAALLHPAFVDTSDAEAAKGPVLFCPSKDEPDMLPLYEIVKKRLGEENAEHHRFDDMFHGFAAARGDWKVEDQRKRADQAIALVHNFFKKHL 244          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig989.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRF8_ECTSI1.480e-10058.78DLH domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835Z8A5_9STRA8.880e-9156.50Alpha/Beta hydrolase protein n=1 Tax=Tribonema min... [more]
A0A1Y1Y5T6_9FUNG3.510e-6141.22Alpha/beta-hydrolase n=1 Tax=Basidiobolus meristos... [more]
A0A836BBU2_9CHLO1.160e-5943.03DLH domain-containing protein n=1 Tax=Chlamydomona... [more]
A0A4D9D470_9STRA1.870e-5843.20DLH domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A0L0HMK7_SPIPD4.150e-5741.46DLH domain-containing protein n=2 Tax=Spizellomyce... [more]
A0A1X2HGG9_SYNRA4.240e-5741.39Alpha/Beta hydrolase protein n=1 Tax=Syncephalastr... [more]
A0A261XVA5_9FUNG1.090e-5543.27DLH domain-containing protein n=1 Tax=Bifiguratus ... [more]
L8H284_ACACA9.910e-5542.15Dienelactone hydrolase family protein n=1 Tax=Acan... [more]
A0A1D2MEH3_ORCCI8.460e-5441.39Putative AIM2 family protein C30D10.14 n=1 Tax=Orc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig989contigD-mesarthrocarpus_Contig989:3139..7068 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FRF8
PFAMsDLH
Model size1221
Max annot lvl2759|Eukaryota
KEGG rclassRC01018,RC01906,RC01907,RC02441,RC02467,RC02468,RC02674,RC02675,RC02686
KEGG koko:K01061,ko:K14515,ko:K18272
KEGG ReactionR03893,R05510,R05511,R06835,R06838,R08120,R08121,R09136,R09220,R09222
KEGG Pathwayko00361,ko00364,ko00623,ko01100,ko01110,ko01120,ko01130,ko04016,ko04075,map00361,map00364,map00623,map01100,map01110,map01120,map01130,map04016,map04075
Hectar predicted targeting categoryother localisation
Exons7
Evalue1.51e-103
EggNOG OGsCOG0412@1|root,KOG3043@2759|Eukaryota
Ec32 ortholog descriptionAlpha/Beta hydrolase fold
Ec32 orthologEc-08_000790.1
EC3.1.1.45
DescriptionDienelactone hydrolase family
Cds size738
COG categoryQ
BRITEko00000,ko00001,ko01000,ko04121,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig989.2.1prot_D-mesarthrocarpus_Contig989.2.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig989 3622..7068 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791139.2077725-UTR-D-mesarthrocarpus_Contig989:3138..36211680791139.2077725-UTR-D-mesarthrocarpus_Contig989:3138..3621Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig989 3139..3621 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791139.2261448-CDS-D-mesarthrocarpus_Contig989:3621..37121680791139.2261448-CDS-D-mesarthrocarpus_Contig989:3621..3712Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig989 3622..3712 -
1680791139.2393386-CDS-D-mesarthrocarpus_Contig989:4338..44811680791139.2393386-CDS-D-mesarthrocarpus_Contig989:4338..4481Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig989 4339..4481 -
1680791139.2525074-CDS-D-mesarthrocarpus_Contig989:5095..53331680791139.2525074-CDS-D-mesarthrocarpus_Contig989:5095..5333Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig989 5096..5333 -
1680791139.2685683-CDS-D-mesarthrocarpus_Contig989:6213..63111680791139.2685683-CDS-D-mesarthrocarpus_Contig989:6213..6311Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig989 6214..6311 -
1680791139.2809796-CDS-D-mesarthrocarpus_Contig989:6565..66301680791139.2809796-CDS-D-mesarthrocarpus_Contig989:6565..6630Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig989 6566..6630 -
1680791139.2935255-CDS-D-mesarthrocarpus_Contig989:6845..69201680791139.2935255-CDS-D-mesarthrocarpus_Contig989:6845..6920Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig989 6846..6920 -
1680791139.30553-CDS-D-mesarthrocarpus_Contig989:7040..70681680791139.30553-CDS-D-mesarthrocarpus_Contig989:7040..7068Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig989 7041..7068 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig989.2.1

>prot_D-mesarthrocarpus_Contig989.2.1 ID=prot_D-mesarthrocarpus_Contig989.2.1|Name=mRNA_D-mesarthrocarpus_Contig989.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=246bp
MASSACCDAGPPIVSDYEPKGIISNVNGTDTYLIGSGPQAIVIVYDVFGF
TPQAKQVCDSLAASGFNVAMPDFFKGNPWKLEHFPAPDKAAFLSWVGTSG
DFDTVVRPGVESTMEFLKGKGAETFGVIGFCWGGAMAMKMAALGGGDSPI
KAAACAHPAFLTEELAAEVKVPMLIMPSKDDPDHLPLKAVLDAKDFGDKC
MYKRFDDMHHGFCAARGDWSVPEQAARATECVGMFVNFMKKNMES*
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mRNA from alignment at D-mesarthrocarpus_Contig989:3139..7068-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig989.2.1 ID=mRNA_D-mesarthrocarpus_Contig989.2.1|Name=mRNA_D-mesarthrocarpus_Contig989.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3930bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig989:3139..7068- (Discosporangium mesarthrocarpum MT17_79)
ATGGCTTCCTCCGCTTGCTGTGATGCAGGTGGGGCCCTGCACCTATGTGA CAGCAACGCTGAAACGCTGCTCTCGTTGCCTTGTTCGTCGGTCCAAATGC GATACACTTCTTTATTAACAGAGGATCTAATGATTTCTGCCTTGCCAGGT CCCCCGATCGTGTCGGACTACGAGCCTAAAGGAATCATCTCGAATGTCAA TGGGACGGACACATACCTTATCGGTGGGTTGGATAACTGTTTGTGAGAAC TCCATGCTTGGCTTTTGGCCAAACTGCCGCCTGAAGACATGACAGAACCC CCTCCTGCGAAGTCCTATCCCAAGGCATCAGCCCGACCTGCTTCGTTTGA GCTCTTTCTTTATAAACACCCTCCAAAGTTCTGGATTATCGATCAAGCTC CAAGTTCCATTTGACCTTCACCTTGCTTCCATGTACAGGTTCTGGTCCTC AAGCAATCGTCATAGTCTATGATGTCTTTGGGTTCACTCCTCAGGCGAAG CAGGTGTGAACTTGACCCCGATTGCAGATCCCATGGGCGGATAGAACGGC ATGCGTAACTGTACATAGGAAGGGCGAATCAAATGGTTTATTAGCCATAT GTGGCTTGCCGGGAAGTCAGTGCTATTGGGGGTTGTGTTTTGCAGCCTAA AGATTGTTGGAGGACTTCCGCGGAGTCTGTAGATCCTTTTGCCTTCACAT TACTTAACCGTAACCTTAACCCTAACCTAAAATGTTACGCTGACCCTTCG GGGCAAGGTGTGCGACTCGCTGGCCGCGTCTGGATTCAACGTCGCCATGC CTGATTTCTTTAAGGGCAATCCCTGGAAGCTTGAGCACTTCCCTGCTCCG GACAAGTGAGTGAAGCGAGGGAGCTTTCTTTTGTTACATTATGTATTGCC CTGGCCCTGATAAGTTTCATGGCGCTGTTTTTTTGGGGGAAAGTTTGTTA TACGTATTATGGTGCCTCCAGGGAAGGCATTCAACAGGTGTTGATCAGTG ATTGGAGTTTCATGTGCCGACATCTCCGATTTTTCGAGGATACTTTGTTC CCCTTCTGGCGTGAAAGCAGGTAGGTGCACAAAAAGTAACGTTGGTGGTA CACACATTCCAAGGCCCGCTGCCATTCCTGAGAAAGTGCCCACCTCGTCC TTGCCACCATCACCACAGAATTTGTTCCTTAGGAGAATGTTGTTGGTTGT GGGTATAGTGGGTTTTCCCATCATCAAATGGCTCGATTTAATCACGACTG AAGCTTTCCCTTGTGTGTGCAGGGGGGGGGGGGGGGTCGGCATCGATCCC TGTGGATATGCAAACTGTGTGAGCACAGCGCCCTCCTCTGTTGCATCTCA CAAAACTGTTGGCAAAACAGTTGCTTCTGGCGTGTACCGAGAAGCAGCAC GGGTCTGAAAAATTCGGGAGAACACATTAGAGTGAACAAAGGAAAAAAAG GGAAAAAAAAACGAACAAGCAGGAAGGTGATCGTGGCGTTGGGTGGTGTG CCTGAATTGATACTGGTAGGGCAATCCGACCGCAACGGCTACGGGCACCG AGAAACAACGGCTACCAGCACATCCATCGCCACCAAGAAACAATGGAGGG AAGTGAGAATCAAGAGCAGGCATGTGCTGGGCTGTGTGTGCAAAATGTTT CACCCCCCGCTCCTCCCCTTCCCCTTCCCCATCTGTCTCCACCCTGCCCC ATCCGCCCCACATTTCCGTTGTTTCATCACCTCAGGGCGGCTTTCCTGTC GTGGGTGGGCACTAGTGGGGACTTTGACACTGTTGTTCGGCCTGGGGTGG AGTCCACCATGGAGTTCCTCAAGGGCAAGGGCGCCGAGACCTTTGGTGTT ATTGGCTTCTGTTGGGGTGGGGCCATGGCCATGAAGATGGCGGCCCTGGG TGGGGGTGACAGCCCCATTAAGGCTGCTGCTTGTGCTCACCCAGCCTTCC TCACTGAGGAGCTCGCAGCCGAGGTGAGGCTGGAAATGGGCAGAAGGCAT GTGTGTGGGGGGTATTTCATTCTCGCGAGTGTTCATCTCCTTTGTGCTTT GTGTGAATATGTCTTCGAAGCTAGCTCCTGGGGTATCTCATCTATTGATC CAGCAAAATGCAGACTTTTTTGTTATCCTGGCCAAGGAAAAAAAAGAGGA CCTTGGCAATCGGCGCCACGGATGGCAAATGTTGACTTTTCAGTGGGTGC TCGATATGGAAAAGTCAGGGCTGTGGAGATTGTCCCGGCGTGGATTAGCT TTTACTGTCCTGCCGCGTATCATAACAGCCGAGGACACAGACTACAGCGC TCTACCGTCCAGGTCAGGATTCAGGATGGAGCGAGGGTTTTTCTCATGGC TCCCGCACCACGAGGGCTGTCCAGCTAACTAACTCTACTCCCCCCATCGG CTAGCTCCATTGACTTGCTCTCGATGCTGTGCCTCACATCCTTTGCCGGG ATAAGAATGACCCGATCCCACCCCCTGGCGCCAGAACAACGCAAGACAAG AAACGAAACGGCGACGGTGCACACACGCCTTCCTTCTTTTTCTGTCTTGT TTTTGCCCCCCCCCCCCTTTTTTTTTGTGGAGGACAGGTGAAGGTCCCCA TGCTTATCATGCCCTCGAAGGACGACCCGGACCACCTCCCCCTCAAGGCC GTGCTGGATGCAAAGGATTTCGGTGACAAGTGCATGTACAAGCGCTTTGA TGACATGCACCATGGCTTCTGTGCTGCAAGGTGTGAAAGACTGCGCACAG GTGCTCGGAGTGCCCGGAAGTGTGCGTTAAGGCTGGAGGGAGGGAGCACC GGCCAGAGTCGTTGGTGGTTCTCTTTCTGGAGAGGGAGGGATGGTTGTTT TATGTTCGAAGCGCACTGCCCAAGAGGAAAAGAAAAGAAGCTGACACTTA AAAAAATATATATTTTCAGGCTCACTACCAAAAATCAATTAGAGTACTTT AATGAGAGCAGTTTGTCATGGCCTGTGCCGTTAAAAGAGGCAATAAATGT GCCACTGAGGGAATCTTGATGGGTCGTGTGAGGGATCCCATGGAAGCACA TCACATAAAACCTGTTTTCTCTAGTGTAGGTTTGTGTGAGACCGTATGCC CTCAAGAAACGTTGGGAAATCCTTGCGCATCAGAGAAGTGCTTTGGTGTA ACCTATCTAGCACAGTATAGTGGCTGTCAAATTTTTGATTGGCTCCAACT TGTCTGATTATCCATTCCCCCTTTCTGTCCATCTGTGTGCCCCTCTACCT CTGCAAATGCCACCTACTGCACCCAACTCCCTTTACCGGGCACTGTGTGG CTGACTGGGTCCACACTGGCCGGGAATGAACATGCTCGCGCTCATTGTTT TTCCAGGGGGGACTGGTCTGTGCCCGAACAGGCTGCAAGAGCCACAGAGT GTGTTGGTATGTTTGTGAACTTCATGAAGAAGAACATGGAAAGCTGAAAC CATAGGACTGCCTAGATACTGGAGCAGTGCAGAGCAGTTGAAATGGACAG TTGGGGTACACAGACACATGTTAGCTACTGTATTGTGGTCAACAATCATT CCAGGATGGTCTGTGACTTGGGTGAGGGTTTAGGGTTCATAGTTATGGAC TGTCGTATTATACTTTTGATTTGCAGAAGTAAGATGTGTTGAGAAACAGC CCCCCACACTGAATACCGAATATATCTGCATGTTGTGTAAGGTTCTTTAT GTCTATCTCGGTTGCTCATTGTCACTCAAGCCACTGTTGTTGCAGCAGCG GTTCAAGCAGGCAATCTATTTCCCTACAGGTGTGCTTTTCTGAAACAGAG CCAGCAAGCACTACATAGTAGTCATCCTCAAGCCTCATAGGTGATTATTT CCCCCATAATGGACAGGTTAGCAGTATTAATGCATCTGTGTGCCTTTGGA GGTTTTACAGGCACCACTTCTTACATGCAT
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig989:3139..7068-

>mRNA_D-mesarthrocarpus_Contig989.2.1 ID=mRNA_D-mesarthrocarpus_Contig989.2.1|Name=mRNA_D-mesarthrocarpus_Contig989.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=738bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig989:3139..7068- (Discosporangium mesarthrocarpum MT17_79)
ATGGCTTCCTCCGCTTGCTGTGATGCAGGTCCCCCGATCGTGTCGGACTA
CGAGCCTAAAGGAATCATCTCGAATGTCAATGGGACGGACACATACCTTA
TCGGTTCTGGTCCTCAAGCAATCGTCATAGTCTATGATGTCTTTGGGTTC
ACTCCTCAGGCGAAGCAGGTGTGCGACTCGCTGGCCGCGTCTGGATTCAA
CGTCGCCATGCCTGATTTCTTTAAGGGCAATCCCTGGAAGCTTGAGCACT
TCCCTGCTCCGGACAAGGCGGCTTTCCTGTCGTGGGTGGGCACTAGTGGG
GACTTTGACACTGTTGTTCGGCCTGGGGTGGAGTCCACCATGGAGTTCCT
CAAGGGCAAGGGCGCCGAGACCTTTGGTGTTATTGGCTTCTGTTGGGGTG
GGGCCATGGCCATGAAGATGGCGGCCCTGGGTGGGGGTGACAGCCCCATT
AAGGCTGCTGCTTGTGCTCACCCAGCCTTCCTCACTGAGGAGCTCGCAGC
CGAGGTGAAGGTCCCCATGCTTATCATGCCCTCGAAGGACGACCCGGACC
ACCTCCCCCTCAAGGCCGTGCTGGATGCAAAGGATTTCGGTGACAAGTGC
ATGTACAAGCGCTTTGATGACATGCACCATGGCTTCTGTGCTGCAAGGGG
GGACTGGTCTGTGCCCGAACAGGCTGCAAGAGCCACAGAGTGTGTTGGTA
TGTTTGTGAACTTCATGAAGAAGAACATGGAAAGCTGA
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