mRNA_D-mesarthrocarpus_Contig9884.3.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9884.3.1 vs. uniprot
Match: A0A3R6WJ70_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6WJ70_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 5.650e-13 Identity = 43/97 (44.33%), Postives = 60/97 (61.86%), Query Frame = 2
Query: 74 GDSIILETPPVNSPDLIVNDLGSFHSIQQLK-EDVGVSSEDLVEATMEAFN----NESGRVFFFF-AVLGEVLGSKGDNSYKLPHLGKENLRRTGKL 346
G + ++ + P NSPDL V DLG F SIQ L+ + V + +D++EAT+ AF + VF F AV+ V+ GDN ++LPHLGK+ LRR G L
Sbjct: 96 GWTFVVRSQPPNSPDLNVLDLGFFASIQSLQYKSVSRTVDDIIEATLSAFECLGVEKLENVFLTFQAVMRLVIQHSGDNQFRLPHLGKDALRRAGAL 192
BLAST of mRNA_D-mesarthrocarpus_Contig9884.3.1 vs. uniprot
Match: UPI001C261F0C (uncharacterized protein LOC121776676 n=1 Tax=Salvia splendens TaxID=180675 RepID=UPI001C261F0C) HSP 1 Score: 69.7 bits (169), Expect = 5.510e-12 Identity = 43/107 (40.19%), Postives = 62/107 (57.94%), Query Frame = 2
Query: 47 DMGAIQAKAGDSIILETPPVNSPDLIVNDLGSFHSIQQLKEDVGVSS-EDLVEATMEAFNNESGRVF--FFFAVLG---EVLGSKGDNSYKLPHLGKENLRRTGKLP 349
D A + G ++ L P NSPD VNDLG F +IQ L+ + +DLV+A ++F + S F ++ G E++ ++G NSYKLPH+GKE LRR +LP
Sbjct: 102 DFRAAANQNGFTMKLVQQPPNSPDTNVNDLGWFRAIQSLQLQTACKTLDDLVKAVEKSFEDLSAVTLDNVFLSLQGCMVEIMKARGHNSYKLPHMGKEALRRVAQLP 208
BLAST of mRNA_D-mesarthrocarpus_Contig9884.3.1 vs. uniprot
Match: UPI0007F012D1 (uncharacterized protein LOC108203813 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007F012D1) HSP 1 Score: 70.1 bits (170), Expect = 9.530e-12 Identity = 44/101 (43.56%), Postives = 58/101 (57.43%), Query Frame = 2
Query: 65 AKAGDSIILETPPVNSPDLIVNDLGSFHSIQQLK-EDVGVSSEDLVEATMEAFNN----ESGRVFFFFAV-LGEVLGSKGDNSYKLPHLGKENLRRTGKLP 349
+K G I L P NSPDL V DLG F SIQ L+ E + E+LV A ++F+ + RVF + E++ KGDN YK+PH+GK+ L R G LP
Sbjct: 240 SKDGFDIRLICQPPNSPDLNVLDLGFFRSIQDLQHEKAPTTIEELVAAVKQSFDEYPVEKLNRVFLTQQTCMKEIMKFKGDNDYKIPHMGKDRLEREGTLP 340
BLAST of mRNA_D-mesarthrocarpus_Contig9884.3.1 vs. uniprot
Match: UPI002009A106 (uncharacterized protein LOC125220207 n=1 Tax=Salvia hispanica TaxID=49212 RepID=UPI002009A106) HSP 1 Score: 68.9 bits (167), Expect = 1.240e-11 Identity = 42/107 (39.25%), Postives = 63/107 (58.88%), Query Frame = 2
Query: 47 DMGAIQAKAGDSIILETPPVNSPDLIVNDLGSFHSIQQLKEDVGVSS-EDLVEATMEAFNN----ESGRVFFFF-AVLGEVLGSKGDNSYKLPHLGKENLRRTGKLP 349
D A + G +I L P NSPD VNDLG F +IQ L+ ++ +DLV+A ++F++ VF + + E++ KG N YK+PH+GK +LRR+G+LP
Sbjct: 102 DFRAAATQNGFNIQLVQQPPNSPDTDVNDLGWFRAIQSLQLQTACNTIDDLVKAVEKSFHDLCPVTLDNVFLSLQSCMLEIMRLKGQNCYKIPHMGKASLRRSGQLP 208
BLAST of mRNA_D-mesarthrocarpus_Contig9884.3.1 vs. uniprot
Match: UPI001C2659A6 (uncharacterized protein LOC121754350 n=3 Tax=Salvia splendens TaxID=180675 RepID=UPI001C2659A6) HSP 1 Score: 68.2 bits (165), Expect = 5.320e-11 Identity = 43/107 (40.19%), Postives = 61/107 (57.01%), Query Frame = 2
Query: 47 DMGAIQAKAGDSIILETPPVNSPDLIVNDLGSFHSIQQLKEDVGVSS-EDLVEATMEAFNNESGR----VFFFF-AVLGEVLGSKGDNSYKLPHLGKENLRRTGKLP 349
D + G S+ L P SPD VNDLG F +IQ L+ + +DL++A ++F++ S + VF + + E+L KG NSYK+PHLGK NLRR +LP
Sbjct: 302 DFKVAAQQHGFSMSLVQQPPCSPDTNVNDLGWFRAIQSLQVQTACKTIDDLIKAVEKSFHDLSPQTLDNVFLSLQSCMVEILKVKGQNSYKVPHLGKNNLRRNAQLP 408
BLAST of mRNA_D-mesarthrocarpus_Contig9884.3.1 vs. uniprot
Match: A0A024UEL1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UEL1_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 2.370e-10 Identity = 41/97 (42.27%), Postives = 57/97 (58.76%), Query Frame = 2
Query: 74 GDSIILETPPVNSPDLIVNDLGSFHSIQQLKED-VGVSSEDLVEATMEAFNNESGR----VFFFF-AVLGEVLGSKGDNSYKLPHLGKENLRRTGKL 346
G S ++ P NSPDL V DLG F S+Q L+ V S +D++ AT+ AF G VF AV+ +L + G N+++LPHL K++LRR G L
Sbjct: 149 GWSFVVRCQPPNSPDLNVLDLGFFSSLQTLQHKLVSRSLDDVIHATLAAFELSGGHTLANVFLTLQAVMRVMLENNGGNTFRLPHLRKDSLRRVGAL 245
BLAST of mRNA_D-mesarthrocarpus_Contig9884.3.1 vs. uniprot
Match: A0A484LB41_9ASTE (Uncharacterized protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484LB41_9ASTE) HSP 1 Score: 65.1 bits (157), Expect = 2.850e-10 Identity = 42/98 (42.86%), Postives = 57/98 (58.16%), Query Frame = 2
Query: 74 GDSIILETPPVNSPDLIVNDLGSFHSIQQLKEDVGVSS-EDLVEATMEAFNN-ESGRVFFFFAVL----GEVLGSKGDNSYKLPHLGKENLRRTGKLP 349
G I L P NSPDL V DLG F +IQ L++D + +DLV +++N E R F + L GEV+ G N+YK+PH+GK +L R+G LP
Sbjct: 109 GFDISLTFQPPNSPDLNVLDLGYFRAIQSLQQDHKCKTIDDLVHVVTKSYNEFEPMRSNFVWLSLQYCMGEVIKKLGCNAYKIPHVGKYSLLRSGNLP 206
BLAST of mRNA_D-mesarthrocarpus_Contig9884.3.1 vs. uniprot
Match: A0A6A4Z322_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z322_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 3.500e-10 Identity = 43/109 (39.45%), Postives = 66/109 (60.55%), Query Frame = 2
Query: 47 DMGAIQAKAGD--SIILETPPVNSPDLIVNDLGSFHSIQQLKEDVGVSS-EDLVEATMEAFNNESG----RVFFFF-AVLGEVLGSKGDNSYKLPHLGKENLRRTGKLP 349
D + A D S+ L+ P NSPDL V DLG F +IQ L++ ++ +++V+AT +A+++ R F L EV+ + GDNSYK+PH+ KE L+++GKLP
Sbjct: 318 DAAVVSACTSDGWSMSLKCQPPNSPDLNVLDLGFFRAIQSLQQTHHSNTYQEIVDATNKAWDDVDPWSLERNFLTLQCCLREVIMAAGDNSYKVPHMKKEALKKSGKLP 426
BLAST of mRNA_D-mesarthrocarpus_Contig9884.3.1 vs. uniprot
Match: A0A225WZV1_9STRA (Mar9 Transposase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WZV1_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 7.980e-10 Identity = 44/109 (40.37%), Postives = 61/109 (55.96%), Query Frame = 2
Query: 41 GGDMGAIQAKAGDSIILETPPVNSPDLIVNDLGSFHSIQQLKEDVGV-SSEDLVEATMEAFNNESGR----VFFFFA-VLGEVLGSKGDNSYKLPHLGKENLRRTGKLP 349
G D A G +I + P N PD V DLG F SIQ ++ + + S+E L+ A ++A+N S VF V+ +L SKG N+Y LPH+GK+ LRR G+LP
Sbjct: 256 GPDDAAAGTADGWNICMFPQPANLPDGNVLDLGFFTSIQNIQIERPIYSTEALITAVIDAYNRLSSATLDDVFLSLQNVMICILQSKGGNAYMLPHMGKQKLRREGRLP 364
BLAST of mRNA_D-mesarthrocarpus_Contig9884.3.1 vs. uniprot
Match: UPI0020091A08 (uncharacterized protein LOC125206097 n=1 Tax=Salvia hispanica TaxID=49212 RepID=UPI0020091A08) HSP 1 Score: 64.7 bits (156), Expect = 8.800e-10 Identity = 43/104 (41.35%), Postives = 56/104 (53.85%), Query Frame = 2
Query: 56 AIQAKAGDSIILETPPVNSPDLIVNDLGSFHSIQQLKEDVGVSSED-LVEATMEAFNNES----GRVFFFF-AVLGEVLGSKGDNSYKLPHLGKENLRRTGKLP 349
AI G I L P NSPD + DLG F +IQ L+ + D LVE +A+ + RVF A L ++L +GDNSYK+PH+ K+ L RTG LP
Sbjct: 311 AIANSDGFKIHLICQPPNSPDTNILDLGFFRAIQSLQHQKPCRNVDELVENVCKAYEELTPQTLNRVFLSLQACLTQILQFRGDNSYKVPHMNKDRLERTGGLP 414 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9884.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig9884.3.1 >prot_D-mesarthrocarpus_Contig9884.3.1 ID=prot_D-mesarthrocarpus_Contig9884.3.1|Name=mRNA_D-mesarthrocarpus_Contig9884.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=111bp MVQSRTRGGGDMGAIQAKAGDSIILETPPVNSPDLIVNDLGSFHSIQQLKback to top mRNA from alignment at D-mesarthrocarpus_Contig9884:4262..4631- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig9884.3.1 ID=mRNA_D-mesarthrocarpus_Contig9884.3.1|Name=mRNA_D-mesarthrocarpus_Contig9884.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=370bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9884:4262..4631- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9884:4262..4631- >mRNA_D-mesarthrocarpus_Contig9884.3.1 ID=mRNA_D-mesarthrocarpus_Contig9884.3.1|Name=mRNA_D-mesarthrocarpus_Contig9884.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=333bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9884:4262..4631- (Discosporangium mesarthrocarpum MT17_79)back to top |