mRNA_D-mesarthrocarpus_Contig9879.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9879.1.1 vs. uniprot
Match: D7G358_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G358_ECTSI) HSP 1 Score: 164 bits (414), Expect = 1.780e-42 Identity = 79/109 (72.48%), Postives = 90/109 (82.57%), Query Frame = 1 Query: 1 QDRLKQKCKPTVHEMMFFMNLWALGFLSVLAVVSGQGRDGYAFCSANTAVMGDVVGFSLAAAMGQNFIYFTISAFNPLVCTTITTTRKFFTILFSVVVYGHSISTAQWG 327 Q+RLK CKPTVHEMMFFMN WAL LS A +SGQ +GYAFCSAN +VM V+GFSLAAA GQNFIY+TIS FNPLVCTTITTTRKFFTI+ SV+++GH+I QWG Sbjct: 199 QERLKAACKPTVHEMMFFMNAWALAILSAAAYLSGQAVEGYAFCSANPSVMSYVLGFSLAAAFGQNFIYYTISNFNPLVCTTITTTRKFFTIVCSVIIFGHAIGPKQWG 307
BLAST of mRNA_D-mesarthrocarpus_Contig9879.1.1 vs. uniprot
Match: D7G364_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G364_ECTSI) HSP 1 Score: 146 bits (369), Expect = 6.200e-36 Identity = 73/109 (66.97%), Postives = 82/109 (75.23%), Query Frame = 1 Query: 1 QDRLKQKCKPTVHEMMFFMNLWALGFLSVLAVVSGQGRDGYAFCSANTAVMGDVVGFSLAAAMGQNFIYFTISAFNPLVCTTITTTRKFFTILFSVVVYGHSISTAQWG 327 Q+RLK CKPTV+EMMF+ N WALGFLS A SGQ G FC+ N V G VV FSLAAA GQ FIY+TI+ FNPL C TITTTRKFFTI+FSV+ +GHSIS QWG Sbjct: 181 QERLKAICKPTVYEMMFYTNAWALGFLSAAAFASGQWMKGSLFCADNPLVTGYVVAFSLAAACGQFFIYYTITTFNPLACATITTTRKFFTIVFSVITFGHSISLKQWG 289
BLAST of mRNA_D-mesarthrocarpus_Contig9879.1.1 vs. uniprot
Match: A0A6H5JQ56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ56_9PHAE) HSP 1 Score: 143 bits (360), Expect = 7.600e-36 Identity = 71/109 (65.14%), Postives = 81/109 (74.31%), Query Frame = 1 Query: 1 QDRLKQKCKPTVHEMMFFMNLWALGFLSVLAVVSGQGRDGYAFCSANTAVMGDVVGFSLAAAMGQNFIYFTISAFNPLVCTTITTTRKFFTILFSVVVYGHSISTAQWG 327 Q+RLK CKPT +EMMF+ N WALGFLS A SGQ G FC+ N VMG VV FSL AA GQ FIY+TI+ F+PL C TITTTRKFFTI+FSV+ +GHSIS QWG Sbjct: 70 QERLKTICKPTAYEMMFYTNAWALGFLSAAAFASGQWVKGSLFCADNPLVMGYVVAFSLTAACGQFFIYYTITTFSPLACATITTTRKFFTIVFSVITFGHSISLKQWG 178
BLAST of mRNA_D-mesarthrocarpus_Contig9879.1.1 vs. uniprot
Match: A0A835ZCP5_9STRA (UAA transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCP5_9STRA) HSP 1 Score: 142 bits (358), Expect = 2.530e-34 Identity = 70/108 (64.81%), Postives = 85/108 (78.70%), Query Frame = 1 Query: 1 QDRLKQKCKPTVHEMMFFMNLWALGFLSVLAVVSGQGRDGYAFCSANTAVMGDVVGFSLAAAMGQNFIYFTISAFNPLVCTTITTTRKFFTILFSVVVYGHSISTAQW 324 QD +K+ K TVHEMMF+MN WAL L+ +AV++GQ GYAFC N AV+ D+ GF+L AA+GQNFIYFTIS F+ LVCTTITTTRKFFTILFSV+ +GH +S QW Sbjct: 210 QDNIKRAHKHTVHEMMFWMNAWALVVLTPMAVLTGQAAGGYAFCQENPAVLRDLFGFALTAALGQNFIYFTISHFSSLVCTTITTTRKFFTILFSVLFFGHPMSPKQW 317
BLAST of mRNA_D-mesarthrocarpus_Contig9879.1.1 vs. uniprot
Match: A0A5D6XRA2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XRA2_9STRA) HSP 1 Score: 125 bits (315), Expect = 1.150e-28 Identity = 59/108 (54.63%), Postives = 77/108 (71.30%), Query Frame = 1 Query: 1 QDRLKQKCKPTVHEMMFFMNLWALGFLSVLAVVSGQGRDGYAFCSANTAVMGDVVGFSLAAAMGQNFIYFTISAFNPLVCTTITTTRKFFTILFSVVVYGHSISTAQW 324 Q+ + Q +P+VH+ MF+ NLWA+ + A+ +GQG G AFC+ N A++ V FS+ +A+GQNFIYFTI F+ L CTTITTTRKFFTILFSVV YGH +S W Sbjct: 182 QEEIAQTLRPSVHQQMFYTNLWAVIYTGAGALATGQGLAGLAFCAENPAILSSVFYFSVCSALGQNFIYFTIQQFSALTCTTITTTRKFFTILFSVVWYGHELSATSW 289
BLAST of mRNA_D-mesarthrocarpus_Contig9879.1.1 vs. uniprot
Match: A0A2D4BZF8_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZF8_PYTIN) HSP 1 Score: 125 bits (313), Expect = 3.100e-28 Identity = 59/108 (54.63%), Postives = 76/108 (70.37%), Query Frame = 1 Query: 1 QDRLKQKCKPTVHEMMFFMNLWALGFLSVLAVVSGQGRDGYAFCSANTAVMGDVVGFSLAAAMGQNFIYFTISAFNPLVCTTITTTRKFFTILFSVVVYGHSISTAQW 324 Q+ + Q +PTVH+ MF+ NLWA+ + A+V+GQ G+ FC N A++ V FS+ +A GQNFIYFTI F+ L CTTITTTRKFFTILFSVV YGHS++ W Sbjct: 200 QEEISQTLRPTVHQQMFYTNLWAVLYTGAGALVTGQAVSGFQFCVENPAILNSVFYFSICSAXGQNFIYFTIQQFSALTCTTITTTRKFFTILFSVVWYGHSLTAMSW 307
BLAST of mRNA_D-mesarthrocarpus_Contig9879.1.1 vs. uniprot
Match: K3X0M7_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X0M7_GLOUD) HSP 1 Score: 122 bits (307), Expect = 1.670e-27 Identity = 57/108 (52.78%), Postives = 76/108 (70.37%), Query Frame = 1 Query: 1 QDRLKQKCKPTVHEMMFFMNLWALGFLSVLAVVSGQGRDGYAFCSANTAVMGDVVGFSLAAAMGQNFIYFTISAFNPLVCTTITTTRKFFTILFSVVVYGHSISTAQW 324 Q+ + Q +P+VH+ MF+ NLWA+ + A+++GQ G+ FC N A++ V FS+ +A+GQNFIYFTI F+ L CTTITTTRKFFTILFSVV YGH +S W Sbjct: 189 QEEISQTLRPSVHQQMFYTNLWAVIYTGAGALLTGQAFSGFFFCVENPAILNSVFYFSICSALGQNFIYFTIQQFSALTCTTITTTRKFFTILFSVVWYGHQLSAMSW 296
BLAST of mRNA_D-mesarthrocarpus_Contig9879.1.1 vs. uniprot
Match: A0A6V2XTI4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2XTI4_HETAK) HSP 1 Score: 124 bits (310), Expect = 1.850e-27 Identity = 57/108 (52.78%), Postives = 79/108 (73.15%), Query Frame = 1 Query: 1 QDRLKQKCKPTVHEMMFFMNLWALGFLSVLAVVSGQGRDGYAFCSANTAVMGDVVGFSLAAAMGQNFIYFTISAFNPLVCTTITTTRKFFTILFSVVVYGHSISTAQW 324 Q +LK++ KPTVHE+MFF N+WA+ L++ + +GQ G + AN + + FS +A+GQNFI+FT+SAF+PLVCTTITTTRKFFT+LFSV +GH ++T W Sbjct: 227 QSKLKKQAKPTVHELMFFTNMWAVVILAIGCLGTGQLFSGVTYILANPGIWSPIAVFSATSALGQNFIFFTVSAFDPLVCTTITTTRKFFTVLFSVFAFGHKLTTNHW 334
BLAST of mRNA_D-mesarthrocarpus_Contig9879.1.1 vs. uniprot
Match: A0A0P1AG43_PLAHL (Solute carrier family 35 member b1 n=6 Tax=Peronosporaceae TaxID=4777 RepID=A0A0P1AG43_PLAHL) HSP 1 Score: 119 bits (299), Expect = 2.120e-26 Identity = 56/108 (51.85%), Postives = 76/108 (70.37%), Query Frame = 1 Query: 1 QDRLKQKCKPTVHEMMFFMNLWALGFLSVLAVVSGQGRDGYAFCSANTAVMGDVVGFSLAAAMGQNFIYFTISAFNPLVCTTITTTRKFFTILFSVVVYGHSISTAQW 324 Q+ + + +P+VH+ MF N+WA+ + + A+V+GQ +G FC N A++ V FS+ +A+GQNFIYFTI F+ L CTTITTTRKFFTILFSVV YGH +S W Sbjct: 191 QEEIAHQLRPSVHQQMFNTNIWAVVYTGIGALVTGQALEGLYFCINNPAILNSVFYFSICSALGQNFIYFTIQQFSALTCTTITTTRKFFTILFSVVWYGHELSLMSW 298
BLAST of mRNA_D-mesarthrocarpus_Contig9879.1.1 vs. uniprot
Match: A0A6A3HCE6_9STRA (Uncharacterized protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3HCE6_9STRA) HSP 1 Score: 119 bits (297), Expect = 3.980e-26 Identity = 57/108 (52.78%), Postives = 76/108 (70.37%), Query Frame = 1 Query: 1 QDRLKQKCKPTVHEMMFFMNLWALGFLSVLAVVSGQGRDGYAFCSANTAVMGDVVGFSLAAAMGQNFIYFTISAFNPLVCTTITTTRKFFTILFSVVVYGHSISTAQW 324 Q+ + + +P+VH+ M NLWA+ + V A+V+GQ +G+ FC N A++ V FS+ +A+GQNFIYFTI F+ L CTTITTTRKFFTILFSVV YGH +S W Sbjct: 191 QEEIAHQLRPSVHQQMLNTNLWAVLYTGVGALVTGQALEGFFFCLENPAILQSVFYFSVCSALGQNFIYFTIQQFSALTCTTITTTRKFFTILFSVVWYGHELSLMSW 298 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9879.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig9879.1.1 >prot_D-mesarthrocarpus_Contig9879.1.1 ID=prot_D-mesarthrocarpus_Contig9879.1.1|Name=mRNA_D-mesarthrocarpus_Contig9879.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=96bp MMFFMNLWALGFLSVLAVVSGQGRDGYAFCSANTAVMGDVVGFSLAAAMGback to top mRNA from alignment at D-mesarthrocarpus_Contig9879:222..2559+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig9879.1.1 ID=mRNA_D-mesarthrocarpus_Contig9879.1.1|Name=mRNA_D-mesarthrocarpus_Contig9879.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2338bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9879:222..2559+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9879:222..2559+ >mRNA_D-mesarthrocarpus_Contig9879.1.1 ID=mRNA_D-mesarthrocarpus_Contig9879.1.1|Name=mRNA_D-mesarthrocarpus_Contig9879.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=288bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9879:222..2559+ (Discosporangium mesarthrocarpum MT17_79)back to top |