mRNA_D-mesarthrocarpus_Contig9876.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9876.2.1
Unique NamemRNA_D-mesarthrocarpus_Contig9876.2.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9876.2.1 vs. uniprot
Match: A0A448ZNT1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZNT1_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 3.680e-16
Identity = 49/122 (40.16%), Postives = 67/122 (54.92%), Query Frame = 1
Query:    1 MEAIQAKAGDSIILETQPANSPDLNVNDLGFFHSTQQLKEN---------VGATMEAFGVYPQETLERVRQSLFAVLGEVLGSKSGNSYKLPHLGKENLGRTGKLPVNGRVDEEKYRVGNAF 339
            ++A  A  G +I ++TQP NSPD+NV DLGFF+S Q L+           +    EAF    +ETL  V  SL A +   LG    N+YKLPH+GK +L R G LP++   D ++   G A 
Sbjct:  405 VKAAAASKGWNITVKTQPPNSPDMNVLDLGFFNSIQSLQYKKRSKDIDHLIANVEEAFDECKRETLNNVFLSLQACMEASLGVDGDNNYKLPHMGKASLMREGTLPISIICDPDRINAGRAL 526          
BLAST of mRNA_D-mesarthrocarpus_Contig9876.2.1 vs. uniprot
Match: UPI0007EF40B3 (uncharacterized protein LOC108194535 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007EF40B3)

HSP 1 Score: 82.4 bits (202), Expect = 6.180e-16
Identity = 46/99 (46.46%), Postives = 56/99 (56.57%), Query Frame = 1
Query:   25 GDSIILETQPANSPDLNVNDLGFFHSTQQLK---------ENVGATMEAFGVYPQETLERVRQSLFAVLGEVLGSKSGNSYKLPHLGKENLGRTGKLPV 294
            G +I L  QPANSPDLN+NDLGFF   Q L+         E VGA +EA+      TL  V  SL   + E+L     N+YKLPH+GK  L R G+LP 
Sbjct:  334 GFNITLANQPANSPDLNINDLGFFRVIQGLQHEKAPTTVCELVGAVLEAYEEVSDSTLNHVWLSLMGCMTEILRKDGNNNYKLPHIGKGKLERLGQLPT 432          
BLAST of mRNA_D-mesarthrocarpus_Contig9876.2.1 vs. uniprot
Match: UPI0007F012D1 (uncharacterized protein LOC108203813 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007F012D1)

HSP 1 Score: 79.7 bits (195), Expect = 3.960e-15
Identity = 46/109 (42.20%), Postives = 60/109 (55.05%), Query Frame = 1
Query:   16 AKAGDSIILETQPANSPDLNVNDLGFFHSTQQLK---------ENVGATMEAFGVYPQETLERVRQSLFAVLGEVLGSKSGNSYKLPHLGKENLGRTGKLPVNGRVDEE 315
            +K G  I L  QP NSPDLNV DLGFF S Q L+         E V A  ++F  YP E L RV  +    + E++  K  N YK+PH+GK+ L R G LP+  R + +
Sbjct:  240 SKDGFDIRLICQPPNSPDLNVLDLGFFRSIQDLQHEKAPTTIEELVAAVKQSFDEYPVEKLNRVFLTQQTCMKEIMKFKGDNDYKIPHMGKDRLEREGTLPLQIRCESD 348          
BLAST of mRNA_D-mesarthrocarpus_Contig9876.2.1 vs. uniprot
Match: A0A1R3KCM2_9ROSI (Uncharacterized protein n=1 Tax=Corchorus olitorius TaxID=93759 RepID=A0A1R3KCM2_9ROSI)

HSP 1 Score: 79.0 bits (193), Expect = 5.430e-15
Identity = 43/106 (40.57%), Postives = 64/106 (60.38%), Query Frame = 1
Query:   25 GDSIILETQPANSPDLNVNDLGFFHSTQQLK---------ENVGATMEAFGVYPQETLERVRQSLFAVLGEVLGSKSGNSYKLPHLGKENLGRTGKLPVNGRVDEE 315
            G  I L  QPANSPDLNV DLGFF++ Q L+         E + A +++F  YP +   R+  +L + + E++ ++  N+Y +PHLGK+ L R GKLP+  + D E
Sbjct:  194 GFDIQLRNQPANSPDLNVLDLGFFNAMQALQHQEAPTMIDELINAVIKSFYDYPPKKSNRIFITLQSSMVEIMRAQGCNNYDIPHLGKQRLERQGKLPIRLKCDAE 299          
BLAST of mRNA_D-mesarthrocarpus_Contig9876.2.1 vs. uniprot
Match: UPI001C2598AD (uncharacterized protein LOC121781491 n=1 Tax=Salvia splendens TaxID=180675 RepID=UPI001C2598AD)

HSP 1 Score: 77.8 bits (190), Expect = 6.290e-15
Identity = 48/109 (44.04%), Postives = 58/109 (53.21%), Query Frame = 1
Query:   25 GDSIILETQPANSPDLNVNDLGFFHSTQQLK---------ENVGATMEAFGVYPQETLERVRQSLFAVLGEVLGSKSGNSYKLPHLGKENLGRTGKLPVNGRVDEEKYR 324
            G  I L  QPANSPD N+ DLGFF + Q L+         E VG    +F     +TL RV  SL A L E+L  + GN YK+PH+ K  L RT  LP    VDE+  R
Sbjct:  111 GFRIQLICQPANSPDTNILDLGFFRAIQSLQYEKPCKTVDELVGNVCSSFAELSPQTLNRVFLSLQACLTEILQCRGGNGYKVPHINKNRLQRTVGLPNQLEVDEDVVR 219          
BLAST of mRNA_D-mesarthrocarpus_Contig9876.2.1 vs. uniprot
Match: UPI000DF4E7C4 (uncharacterized protein LOC112889894 n=1 Tax=Panicum hallii TaxID=206008 RepID=UPI000DF4E7C4)

HSP 1 Score: 79.0 bits (193), Expect = 1.110e-14
Identity = 48/108 (44.44%), Postives = 58/108 (53.70%), Query Frame = 1
Query:   19 KAGDSIILETQPANSPDLNVNDLGFFHSTQQLK---------ENVGATMEAFGVYPQETLERVRQSLFAVLGEVLGSKSGNSYKLPHLGKENLGRTGKLPVNGRVDEE 315
            K G  I L  QPANSPDLN+ DLGFF+S Q ++         E V A +EAF  YP   L R+  S  A + EV+    GN YK+PH+ K  L R   LPV    D E
Sbjct:  380 KDGFDIRLMLQPANSPDLNICDLGFFNSIQSIQYKTSSKSTEELVSAVLEAFADYPPSKLNRIFLSFHACMNEVIKIGGGNEYKVPHIRKGVLERQDCLPVQLGCDAE 487          
BLAST of mRNA_D-mesarthrocarpus_Contig9876.2.1 vs. uniprot
Match: UPI000DF4D55F (uncharacterized protein LOC112902865 n=2 Tax=Panicum hallii TaxID=206008 RepID=UPI000DF4D55F)

HSP 1 Score: 79.0 bits (193), Expect = 1.160e-14
Identity = 48/108 (44.44%), Postives = 58/108 (53.70%), Query Frame = 1
Query:   19 KAGDSIILETQPANSPDLNVNDLGFFHSTQQLK---------ENVGATMEAFGVYPQETLERVRQSLFAVLGEVLGSKSGNSYKLPHLGKENLGRTGKLPVNGRVDEE 315
            K G  I L  QPANSPDLN+ DLGFF+S Q ++         E V A +EAF  YP   L R+  S  A + EV+    GN YK+PH+ K  L R   LPV    D E
Sbjct:  537 KDGFDIRLMLQPANSPDLNICDLGFFNSIQSIQYKTSSKSTEELVSAVLEAFADYPPSKLNRIFLSFHACMNEVIKIGGGNEYKVPHIRKGVLERQDCLPVQLGCDAE 644          
BLAST of mRNA_D-mesarthrocarpus_Contig9876.2.1 vs. uniprot
Match: A0A8I6XBC5_HORVV (Uncharacterized protein n=1 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=A0A8I6XBC5_HORVV)

HSP 1 Score: 77.0 bits (188), Expect = 2.770e-14
Identity = 47/116 (40.52%), Postives = 63/116 (54.31%), Query Frame = 1
Query:    1 MEAIQAKAGDSIILETQPANSPDLNVNDLGFFHSTQQL---------KENVGATMEAFGVYPQETLERVRQSLFAVLGEVLGSKSGNSYKLPHLGKENLGRTGKLPVNGRVDEEKY 321
            +EA+ AK+G  I +  QPANSPDLNV DLGFF+S Q L         ++ +   +E F  Y    L R+  +L   + E+L     N YKLPH+ KE L R GKLP      ++ Y
Sbjct:  190 LEAV-AKSGLDISIIQQPANSPDLNVLDLGFFNSLQSLTDCLSPKTLQDLINGVLEEFEGYEVYKLNRIFLTLQTCMIEILNHAGANGYKLPHVDKERLERLGKLPQRLSCPQQVY 304          
BLAST of mRNA_D-mesarthrocarpus_Contig9876.2.1 vs. uniprot
Match: UPI001C262711 (uncharacterized protein LOC121782691 n=1 Tax=Salvia splendens TaxID=180675 RepID=UPI001C262711)

HSP 1 Score: 77.4 bits (189), Expect = 3.540e-14
Identity = 45/116 (38.79%), Postives = 64/116 (55.17%), Query Frame = 1
Query:    4 EAIQAKAGDSIILETQPANSPDLNVNDLGFFHSTQQLKEN---------VGATMEAFGVYPQETLERVRQSLFAVLGEVLGSKSGNSYKLPHLGKENLGRTGKLPVNGRVDEEKYR 324
            EA+ +  G    L +QPANSPD NV DLGFF + Q L+++         +G    +F     +TL  V  +L + L ++L    GN+YK+PHL KE L RT +LP +  V+E   R
Sbjct:  292 EALASSNGFKFHLISQPANSPDANVLDLGFFRAIQSLQDDKLATNIDELLGNVWSSFEELTPQTLNNVFLTLQSCLSKILEVHGGNNYKIPHLNKERLRRTVRLPTSLEVEENLVR 407          
BLAST of mRNA_D-mesarthrocarpus_Contig9876.2.1 vs. uniprot
Match: UPI0020091E33 (uncharacterized protein LOC125191636 n=1 Tax=Salvia hispanica TaxID=49212 RepID=UPI0020091E33)

HSP 1 Score: 76.6 bits (187), Expect = 4.800e-14
Identity = 49/116 (42.24%), Postives = 61/116 (52.59%), Query Frame = 1
Query:    4 EAIQAKAGDSIILETQPANSPDLNVNDLGFFHSTQQLK---------ENVGATMEAFGVYPQETLERVRQSLFAVLGEVLGSKSGNSYKLPHLGKENLGRTGKLPVNGRVDEEKYR 324
            +AI    G  I L  QPANSPD N+ DLGFF + Q L+         E VG    +F     +TL RV  SL A L E+L  + GN YK+PH+ K+ L RT  LP    V+E   R
Sbjct:  206 QAIANTDGFKIHLICQPANSPDTNILDLGFFRAIQSLQHEKPCKTVDELVGNVCSSFAELSPQTLNRVFISLQACLREILQCRGGNGYKVPHINKDRLERTVGLPNVLEVEENVVR 321          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9876.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A448ZNT1_9STRA3.680e-1640.16Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
UPI0007EF40B36.180e-1646.46uncharacterized protein LOC108194535 n=1 Tax=Daucu... [more]
UPI0007F012D13.960e-1542.20uncharacterized protein LOC108203813 n=1 Tax=Daucu... [more]
A0A1R3KCM2_9ROSI5.430e-1540.57Uncharacterized protein n=1 Tax=Corchorus olitoriu... [more]
UPI001C2598AD6.290e-1544.04uncharacterized protein LOC121781491 n=1 Tax=Salvi... [more]
UPI000DF4E7C41.110e-1444.44uncharacterized protein LOC112889894 n=1 Tax=Panic... [more]
UPI000DF4D55F1.160e-1444.44uncharacterized protein LOC112902865 n=2 Tax=Panic... [more]
A0A8I6XBC5_HORVV2.770e-1440.52Uncharacterized protein n=1 Tax=Hordeum vulgare su... [more]
UPI001C2627113.540e-1438.79uncharacterized protein LOC121782691 n=1 Tax=Salvi... [more]
UPI0020091E334.800e-1442.24uncharacterized protein LOC125191636 n=1 Tax=Salvi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9876contigD-mesarthrocarpus_Contig9876:4249..4641 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog157072.XP_008874808.1
Model size366
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue6.95e-14
EggNOG OGs2CMKC@1|root,2QQNW@2759|Eukaryota
Cds size366
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791138.4265456-CDS-D-mesarthrocarpus_Contig9876:4248..44851680791138.4265456-CDS-D-mesarthrocarpus_Contig9876:4248..4485Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9876 4249..4485 -
1680791138.4403608-CDS-D-mesarthrocarpus_Contig9876:4512..46411680791138.4403608-CDS-D-mesarthrocarpus_Contig9876:4512..4641Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9876 4513..4641 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9876.2.1prot_D-mesarthrocarpus_Contig9876.2.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9876 4249..4641 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9876.2.1

>prot_D-mesarthrocarpus_Contig9876.2.1 ID=prot_D-mesarthrocarpus_Contig9876.2.1|Name=mRNA_D-mesarthrocarpus_Contig9876.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=122bp
MEAIQAKAGDSIILETQPANSPDLNVNDLGFFHSTQQLKENVGATMEAFG
VYPQETLERVRQSLFAVLGEVLGSKSGNSYKLPHLGKENLGRTGKLPVNG
RVDEEKYRVGNAFWEASGEKG*
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mRNA from alignment at D-mesarthrocarpus_Contig9876:4249..4641-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9876.2.1 ID=mRNA_D-mesarthrocarpus_Contig9876.2.1|Name=mRNA_D-mesarthrocarpus_Contig9876.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=393bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9876:4249..4641- (Discosporangium mesarthrocarpum MT17_79)
ATGGAGGCAATTCAGGCAAAGGCAGGGGACAGCATCATCCTGGAAACCCA GCCTGCTAACTCACCTGACCTCAACGTGAACGATCTTGGATTCTTCCACT CCACCCAGCAGCTGAAGGAGAATGTGGGAGTGTCTTCTCCTGATGATCCG GTTTAGGCCACAATGGAGGCCTTCGGTGTCTACCCCCAGGAGACACTAGA ACGAGTCCGGCAGAGCCTGTTCGCAGTCCTTGGGGAAGTCCTTGGCTCTA AGAGTGGTAATAGCTACAAATTGCCCCATTTGGGCAAGGAGAATCTCGGC AGGACAGGCAAACTACCGGTCAACGGACGGGTGGATGAGGAAAAATACCG TGTCGGAAACGCGTTTTGGGAGGCTTCGGGGGAGAAGGGATAG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9876:4249..4641-

>mRNA_D-mesarthrocarpus_Contig9876.2.1 ID=mRNA_D-mesarthrocarpus_Contig9876.2.1|Name=mRNA_D-mesarthrocarpus_Contig9876.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=366bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9876:4249..4641- (Discosporangium mesarthrocarpum MT17_79)
ATGGAGGCAATTCAGGCAAAGGCAGGGGACAGCATCATCCTGGAAACCCA
GCCTGCTAACTCACCTGACCTCAACGTGAACGATCTTGGATTCTTCCACT
CCACCCAGCAGCTGAAGGAGAATGTGGGAGCCACAATGGAGGCCTTCGGT
GTCTACCCCCAGGAGACACTAGAACGAGTCCGGCAGAGCCTGTTCGCAGT
CCTTGGGGAAGTCCTTGGCTCTAAGAGTGGTAATAGCTACAAATTGCCCC
ATTTGGGCAAGGAGAATCTCGGCAGGACAGGCAAACTACCGGTCAACGGA
CGGGTGGATGAGGAAAAATACCGTGTCGGAAACGCGTTTTGGGAGGCTTC
GGGGGAGAAGGGATAG
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