mRNA_D-mesarthrocarpus_Contig9875.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9875.2.1
Unique NamemRNA_D-mesarthrocarpus_Contig9875.2.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9875.2.1 vs. uniprot
Match: A0A098S581_9BACT (Reverse transcriptase domain-containing protein n=1 Tax=Phaeodactylibacter xiamenensis TaxID=1524460 RepID=A0A098S581_9BACT)

HSP 1 Score: 397 bits (1020), Expect = 1.560e-135
Identity = 193/322 (59.94%), Postives = 247/322 (76.71%), Query Frame = 1
Query:    1 LEKRTLARHRQNKAIFCHLNSTNALSRVLKTEKRKLLLMARQPKYRTFTIPKKEGGERLIETPDASVKHLLSQLNRYLQSIYMLEKTTAAYGFITGVKNDVDRRNVVTNAKKHLGKPYLLNIDLKDFFHSISKDQVIEIFRTRPFKFKLDMAELLASLCTYQDRLPMGTPTSPVLSNFACRPLDQELLAFSADMIWNYTRYADDMSFSSNRIIAAEKIHSVRQIIEKHGFTVNEKKVVVFGPDDDKIVTGLLVNEKVELAPGYLEELEEEVLRLGEVLRTQNEQGQINTKWVEKYKQQVRGRISFAGFVLNRRDERYMALRD 966
            ++KRT  RH Q K  FC L S    S ++KTEKRKL L+A QP Y TFT+PKK+GGERLIE P  ++K     +NR+LQSIY LEKTTAA+GF+ GV+ND DRRN++TNAKKHL K YLLNIDL+DFFH++++D+V+++F   PF FK  + +LLA L TY  RLPMG PTSPVLSNFACR +D+ L A + DM+W YTRYADDMSFSSNR I  E +++V +II + GF  N++K+ V+GP D K+VTGLL+++KV L   YL +LE ++ +LG+VL  QNEQGQ+ T+WVE+ KQQVRGR+SFAGFVL RR ERY  L+D
Sbjct:    1 MDKRTRQRHLQLKTQFCSLRSVTEFSMLVKTEKRKLQLLAAQPAYNTFTVPKKDGGERLIEAPAPALKKAQGSINRFLQSIYYLEKTTAAHGFVVGVRNDDDRRNILTNAKKHLNKTYLLNIDLQDFFHTVTRDEVLDVFMKPPFNFKRQLPDLLADLLTYSGRLPMGAPTSPVLSNFACREMDRRLTAMAEDMLWAYTRYADDMSFSSNRNIDEETVNTVIRIIREEGFVPNKRKIKVYGPKDQKVVTGLLISDKVSLEDNYLAQLETDIRQLGDVLLAQNEQGQLATRWVEQLKQQVRGRLSFAGFVLGRRHERYNQLKD 322          
BLAST of mRNA_D-mesarthrocarpus_Contig9875.2.1 vs. uniprot
Match: F4L2L2_HALH1 (RNA-directed DNA polymerase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) TaxID=760192 RepID=F4L2L2_HALH1)

HSP 1 Score: 379 bits (974), Expect = 1.560e-128
Identity = 181/323 (56.04%), Postives = 252/323 (78.02%), Query Frame = 1
Query:    1 LEKRTLARHRQNKAIFCHLNSTNALSRVLKTEKRKLLLMARQPKYRTFTIPKKEGGERLIETPDASVKHLLSQLNRYLQSIYMLEKTTAAYGFITGVKNDVDRRNVVTNAKKHLGKPYLLNIDLKDFFHSISKDQVIEIFRTRPFKFKLDMAELLASLCTYQDRLPMGTPTSPVLSNFACRPLDQELLAFSADMIWNYTRYADDMSFSSNRIIAAEKIHSVRQIIEKHGFTVNEKKVVVFGPDDDKIVTGLLVN-EKVELAPGYLEELEEEVLRLGEVLRTQNEQGQINTKWVEKYKQQVRGRISFAGFVLNRRDERYMALRD 966
            ++K+ L +H+Q K + C +NS N L+R+L+ ++RKL LMA +P YRTF IPKK+GG R IETP   +K  L  LNRYLQS+Y+ EK++AAYGF+ GVKND DRRNV++NA+KH+GKPYLLNIDL +FFHSI++++V+++F   PF+FK ++ ++LA +CTY+ RLPMG PTSPVLSN AC  LD++L   +  + WN+TRYADDMSFSS+  I  E I S+R+II   GFT+NE+K+ ++GP D K VTG+L+  +   L P YL+ L+EE+ RL EV+R QNE GQ+NT+WVE+ KQQ+RGR++FAGFVL R++ER++ L++
Sbjct:    1 MDKQALYQHQQQKTVLCSINSLNELARLLRLDQRKLTLMAERPNYRTFEIPKKDGGMREIETPGDDLKRTLGILNRYLQSVYLFEKSSAAYGFVVGVKNDDDRRNVLSNARKHIGKPYLLNIDLANFFHSITRERVLKVFTEAPFRFKRELPDVLADICTYRGRLPMGAPTSPVLSNLACMDLDRDLSILANSLFWNFTRYADDMSFSSDTPITPENIVSLRKIITDAGFTLNEQKLKLYGPADPKTVTGILLEADDCTLDPSYLDLLDEEIKRLHEVMRAQNELGQLNTRWVEQLKQQIRGRMAFAGFVLKRKNERFVELKN 323          
BLAST of mRNA_D-mesarthrocarpus_Contig9875.2.1 vs. uniprot
Match: A0A7V5BGL2_9BACT (RNA-directed DNA polymerase n=1 Tax=Saprospiraceae bacterium TaxID=2202734 RepID=A0A7V5BGL2_9BACT)

HSP 1 Score: 269 bits (687), Expect = 3.820e-85
Identity = 144/320 (45.00%), Postives = 205/320 (64.06%), Query Frame = 1
Query:    1 LEKRTLARHRQNKAIFCHLNSTNALSRVLKTEKRKLLLMARQPKYRTFTIPKKEGGERLIETPDASVKHLLSQLNRYLQSIYMLEKTTAAYGFITGVKNDVDRRNVVTNAKKHLGKPYLLNIDLKDFFHSISKDQVIEIFRTRPFKFKLDMAELLASLCTYQDRLPMGTPTSPVLSNFACRPLDQELLAFSADMIWNYTRYADDMSFSSNRIIAAEKIHSVRQIIEKHGFTVNEKKVVVFGPDDDKIVTGLLVNEKVELAPGYLEELEEEVLRLGEVLRTQNEQGQINTKWVEKYKQQVRGRISFAGFVLNRRDERYMAL 960
            L KR L + R     F  +   + L+ +    + KL L+A  P+Y  F++PK+ GG R IE P   +K +   LN +LQ++Y  EKT AAYGFI   +++  R ++V+NA +HL  P+L+N+DL DFFH + ++ V  IF   PF F  D+AE+L  L TY+ RLPMG PTSPVLSNFA   +D +LLAF+    W +TRYADDMSFS +      +I ++RQI  KH F  NE K+ ++GP+D+K+VTGL + E+V L+  +L+E+ EE+ RL +V+  +   GQ  +KWVEKY QQV+GR++FA  VL   D  Y+ L
Sbjct:    4 LSKRRLKQRRDK---FLSMRYVDDLAELTSFVRYKLTLIAGVPQYHFFSVPKRNGGLRHIENPARKLKKVQRTLNNFLQAVYFFEKTEAAYGFIIRARDEAPR-DIVSNAHQHLNVPWLMNMDLTDFFHYVKREDVFHIFCHVPFNFSEDLAEILTQLTTYKGRLPMGAPTSPVLSNFATIDMDIDLLAFAQARGWTFTRYADDMSFSMDTAPMDSEIEAIRQIAGKHQFLFNETKLKIYGPEDEKLVTGLRLGEEVTLSSAFLQEIREEIDRLQKVVEARAMAGQPPSKWVEKYTQQVQGRMAFAEKVLGEYDPIYVEL 319          
BLAST of mRNA_D-mesarthrocarpus_Contig9875.2.1 vs. uniprot
Match: A0A838Z0D8_9BACT (RNA-directed DNA polymerase n=1 Tax=Emticicia sp. BO119 TaxID=2757768 RepID=A0A838Z0D8_9BACT)

HSP 1 Score: 245 bits (625), Expect = 4.540e-76
Identity = 125/297 (42.09%), Postives = 188/297 (63.30%), Query Frame = 1
Query:   73 LSRVLKTEKRKLLLMARQPKYRTFTIPKKEGGERLIETPDASVKHLLSQLNRYLQSIYMLEKTTAAYGFITGVKNDVDRRNVVTNAKKHLGKPYLLNIDLKDFFHSISKDQVIEIFRTRPFKFKLDMAELLASLCTYQDRLPMGTPTSPVLSNFACRPLDQELLAFSADMIWNYTRYADDMSFSSNRIIAAEKIHSVRQIIEKHGFTVNEKKVVVFGPDDDKIVTGLLVNEKVELAPGYLEELEEEVLRLGEVLRTQNEQGQINTKWVEKYKQQVRGRISFAGFVLNRRDERYMALR 963
            ++R+L  E R L  +A +P+Y  F +PKK GG R IE PD  +K++L   N YLQ++Y   K+ AAYGF+    ND   RN+++NA+KH  +P++LN+D  DFFH I + ++ E+F   PF F  ++A LL+ L TY+ RLPMG+PTSPVLSNFA   LDQ+LL F+      Y+R+ADD++FS+N  ++ E +  +RQI   +G  +NE K+  F P   KIVTGL+V  +V++   YLE+L +E+ +L  VL      G+  ++WV+++ QQ+ G I F   +   +   Y  +R
Sbjct:    1 MARLLGIEHRTLDYLAERPQYNEFDVPKKNGGFRHIEDPDNELKNVLRLFNDYLQAVYYFRKSDAAYGFVRVPDNDTAPRNILSNAEKHRNRPWMLNVDFLDFFHQIKQIEIYELFVCPPFNFGEELAVLLSKLTTYKGRLPMGSPTSPVLSNFATLLLDQDLLGFATKKDLVYSRFADDLTFSANSPLSVEHLTGIRQICAFYGLKLNENKINFFLPHQTKIVTGLIVTNRVDIPHTYLEDLRKEIDKLRTVLEINYRTGRQASEWVQRFHQQIEGAIEFIRQIETSKSPDYQQIR 297          
BLAST of mRNA_D-mesarthrocarpus_Contig9875.2.1 vs. uniprot
Match: UPI0003F7B4EC (reverse transcriptase family protein n=1 Tax=Runella zeae TaxID=94255 RepID=UPI0003F7B4EC)

HSP 1 Score: 239 bits (611), Expect = 1.190e-73
Identity = 127/296 (42.91%), Postives = 187/296 (63.18%), Query Frame = 1
Query:   46 FCHLNSTNALSRVLKTEKRKLLLMARQPKYRTFTIPKKEGGERLIETPDASVKHLLSQLNRYLQSIYMLEKTTAAYGFITGVKNDVDRRNVVTNAKKHLGKPYLLNIDLKDFFHSISKDQVIEIFRTRPFKFKLDMAELLASLCTYQDRLPMGTPTSPVLSNFACRPLDQELLAFSADMIWNYTRYADDMSFSSNRIIAAEKIHSVRQIIEKHGFTVNEKKVVVFGPDDDKIVTGLLVNEK-VELAPGYLEELEEEVLRLGEVLRTQNEQGQINTKWVEKYKQQVRGRISFAGFVL 930
            F  +++T  L+  +     +L L+A  P Y  F+IPK+ G  R+IE P   +K +   LN  LQ  Y   KT AA+GF+   ++D D RN++TNA++H+ + +LLN+D  DFFH++S  +V+E+  +  F F    A L+A LCTY+ RLPMG PTSPVLSN+A R LD+ELLA+S    + Y R+ADD++FS    I  + +  +R I   +GFT NE+K+ +  P  +KIVTGL+V +  V+L  G+L ELE E+L+   VL  Q   G+  + WVE+++ Q+ G +SFA FVL
Sbjct:   17 FASIHTTEQLATFVGVPVYQLTLLAEFPAYNCFSIPKQNGKPRMIEDPHKPLKKVQQILNSALQCGYYCNKTHAAFGFLLNPEDDTDPRNILTNAQRHINRLWLLNVDYVDFFHAVSTHRVVELLLSDYFSFDEPTALLIAQLCTYKGRLPMGAPTSPVLSNWAARTLDEELLAWSHRHGFVYMRFADDLTFSRQEPILPQHVQEIRAISTVNGFTFNEQKLKICAPSAEKIVTGLVVGKNGVQLPSGFLGELEAEILKFRTVLEVQARAGRAQSVWVEEFRTQLEGHLSFASFVL 312          
BLAST of mRNA_D-mesarthrocarpus_Contig9875.2.1 vs. uniprot
Match: A0A4Q2UMN3_9BACT (RNA-directed DNA polymerase n=2 Tax=Spirosoma sordidisoli TaxID=2502893 RepID=A0A4Q2UMN3_9BACT)

HSP 1 Score: 240 bits (613), Expect = 1.320e-73
Identity = 128/307 (41.69%), Postives = 182/307 (59.28%), Query Frame = 1
Query:   46 FCHLNSTNALSRVLKTEKRKLLLMARQPKYRTFTIPKKEGGERLIETPDASVKHLLSQLNRYLQSIYMLEKTTAAYGFITGVKNDVDRRNVVTNAKKHLGKPYLLNIDLKDFFHSISKDQVIEIFRTRPFKFKLDMAELLASLCTYQDRLPMGTPTSPVLSNFACRPLDQELLAFSADMIWNYTRYADDMSFSSNRIIAAEKIHSVRQIIEKHGFTVNEKKVVVFGPDDDKIVTGLLVN-EKVELAPGYLEELEEEVLRLGEVLRTQNEQGQINTKWVEKYKQQVRGRISFAGFVLNRRDERYMALR 963
            F  L    +LS++L  +   L L+A QP+Y TF +PKK G  RLIE P+  +K +  +LN YLQ +Y L +T A YGF   V  D D RN++TNA++H+G P++LN D  DFFH ++ D V  +F    F F+ D+AELLA L TY  RL MG PTSPVLSN A  P+D  L   +    W YTR+ADD++ S+   IA  ++      I   G   NE K  V  P   K VTGL+V  + V+L   ++ +   E+ +LG +L      G+  T+W+E+Y+QQV G+++FA F+L+  D +  +LR
Sbjct:   37 FGQLTDPASLSQLLGVQLHLLQLLALQPRYNTFRVPKKNGTFRLIEDPEPHLKQVQKRLNTYLQCVYYLRRTPATYGFQISVDGDNDPRNILTNARRHVGNPWMLNADFLDFFHQVNYDWVYRLFTREVFTFEPDLAELLAKLTTYGGRLAMGAPTSPVLSNLATMPVDDALTELARSYDWTYTRFADDLTVSAQACIAPAQVQEFLNTIAPFGLAFNEAKFAVRSPAMPKTVTGLVVTAQDVQLPASFVTDTLTEIEKLGHLLEIHYRSGRPVTRWLEQYQQQVEGQLAFAEFILDDADSQLHSLR 343          
BLAST of mRNA_D-mesarthrocarpus_Contig9875.2.1 vs. uniprot
Match: A0A3M1J9V0_9BACT (RNA-directed DNA polymerase n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A3M1J9V0_9BACT)

HSP 1 Score: 231 bits (590), Expect = 2.410e-70
Identity = 131/314 (41.72%), Postives = 198/314 (63.06%), Query Frame = 1
Query:   10 RTLARHRQNKAIFCHLNSTNALSRVLKTEKRKLLLMARQPKYRTFTIPKKEGGE-RLIETPDASVKHLLSQLNRYLQSIYMLEKTTAAYGFITGVKNDVDRRNVVTNAKKHLGKPYLLNIDLKDFFHSISKDQVIEIFRTRPFKFKLDMAELLASLCTYQDRLPMGTPTSPVLSNFACRPLDQELLAFSADMIWNYTRYADDMSFSSN-RIIAAEKIHSVRQIIEKHGFTVNEKKVVVFGP-DDDKIVTGLLVN-EKVELAPGYLEELEEEVLRLGEVLRTQN--EQGQIN-TKWVEKYKQQVRGRISFAGFVL 930
            RTL RH +    F        LS +L+TE  +L ++A  PKY T+ IPKK  G  RL+E P+  +K +  +LN YLQ++Y   +   A+GFIT   +D D+R + TNA +HLG  ++LN+D+KDFFH +++++V E+FR    KF  ++A +LA LCTY++RLPMG PTSPVLSN AC PLD +L  F+      Y+RYADD++FSS  + I  E I  + + I  + F +N  K  ++GP D  K VTGL+V  ++V L+P Y+  L + + +L +V+  +     G++  T WV++  QQ++GR++FA  +L
Sbjct:    8 RTLRRHAEQ---FRACRGQTQLSWLLRTEPVRLAMLAADPKYATYRIPKKRKGTFRLVEDPEPRLKRVQKRLNYYLQAVYYFHRPKNAFGFITNPVDDPDQRTIATNAARHLGCQWMLNVDMKDFFHLVNRERVYELFRASLLKFPKNLARVLADLCTYRERLPMGAPTSPVLSNLACIPLDHDLDHFAEQRGLTYSRYADDLTFSSREQPINWELIPQINEWITAYDFQLNPAKSKLYGPADPHKEVTGLIVGVQQVSLSPDYIASLRKGIQQLDQVVNAKYVMPSGRLRATTWVDEIAQQLQGRLAFASQIL 318          
BLAST of mRNA_D-mesarthrocarpus_Contig9875.2.1 vs. uniprot
Match: A0A1H9HCR5_9BACT (Reverse transcriptase (RNA-dependent DNA polymerase) n=1 Tax=Lewinella agarilytica TaxID=478744 RepID=A0A1H9HCR5_9BACT)

HSP 1 Score: 228 bits (582), Expect = 4.400e-69
Identity = 136/322 (42.24%), Postives = 198/322 (61.49%), Query Frame = 1
Query:   22 RHRQNKAIFCHLNSTNALSRVLKTEKRKLLLMARQPKYRTFTIPKKEGGE-RLIETPDASVKHLLSQLNRYLQSIYMLEKTTAAYGFITGVKNDVDRRNVVTNAKKHLGKPYLLNIDLKDFFHSISKDQVIEIFRTRPFKFKLDMAELLASLCTYQDRLPMGTPTSPVLSNFACRPLDQELLAFSADMIWNYTRYADDMSFSSNRI-IAAEKIHSVRQIIEKHGFTVNEKKVVVFGPD-DDKIVTGLLVN-EKVELAPGYLEELEEEVLRLGEVLRTQN--EQGQI-NTKWVEKYKQQVRGRISFAGFVLNRRDERYMALRD 966
            R R N  + C    T  L+R  + +  +L ++A +P+YR F IPKK+ G  R IE P   +K +L +LNR LQ++Y  +++ AAYGF+T    D D RN++TNA++HLG  +L+N+D++DFFH I   +V E+FR  PF F    A+LLA L TY+ RLPMG PTSP+LSN+   PLD+ L  F+    W YTRYADD++FSS    I  E +  V  ++      +N  K V++ PD   K VTGL+V  E+V+L+  +L ++++ + RL +V+ T+     G++  T WVE+  QQVRG +SFA  VL   D   M L +
Sbjct:   11 RRRANSFLAC--KGTLDLARHWRVDNVRLAVLAIEPEYREFRIPKKKPGTFREIEDPRPKLKAILRKLNRDLQAVYYFQRSPAAYGFLTSPARDPDPRNILTNAQQHLGAKWLMNVDMRDFFHQIETHEVAELFRQPPFSFPKATAKLLAGLTTYKGRLPMGAPTSPILSNWYAIPLDKTLTEFARQREWTYTRYADDITFSSKTSPIKFEDVGRVNVLVRGRELELNHNKTVIYPPDAPGKEVTGLIVGAEQVQLSSEFLAKVKDGLRRLNDVVDTKYLMPSGRLAKTPWVEEIAQQVRGLVSFAQKVLPPADPLGMELEE 330          
BLAST of mRNA_D-mesarthrocarpus_Contig9875.2.1 vs. uniprot
Match: A0A7V2W497_9BACT (RNA-directed DNA polymerase n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A7V2W497_9BACT)

HSP 1 Score: 224 bits (572), Expect = 8.280e-68
Identity = 124/289 (42.91%), Postives = 181/289 (62.63%), Query Frame = 1
Query:  103 KLLLMARQPKYRTFTIPKKEGGERLIETPDASVKHLLSQLNRYLQSIYMLEKTTAAYGFITGVKND-VDRRNVVTNAKKHLGKPYLLNIDLKDFFHSISKDQVIEIFRTRPFKFKLDMAELLASLCTYQDRLPMGTPTSPVLSNFACRPLDQELLAFSADMIWNYTRYADDMSFSSNRIIAAEKIHSVRQIIEKHGFTVNEKKVVVFGPDDDKIVTGLLVNE-KVELAPGYLEELEEEVLRLGEVLRTQNEQGQINTK-WVEKYKQQVRGRISFAGFVLNRRDERYMAL 960
            KL L+  QP Y  F I K+ GG+R IE P   +K +L  LN  LQ +Y  EKT AAYGFI   ++D    R++VT+A++HLG  +L+NIDL  FFH IS + V++  +  PF F  ++A+L+A LCTY+ RLPMG PTSPVLSN   +  D+ L A++ D  W YTRYADD+SFSS + I++ ++     ++E H + V+ +K  ++GPDD K VT L++ + ++EL P +LEEL + +  L    RT    G      W+ KY+Q++ G + FA  VL   DE ++ +
Sbjct:   33 KLELLCAQPMYNEFHIRKRNGGKRHIEDPRPPLKRVLGILNDLLQGVYYFEKTEAAYGFIAIARDDPAPPRHIVTHAERHLGCRWLMNIDLTSFFHQISTEMVLDRLKDPPFHFDDEVADLMARLCTYKGRLPMGAPTSPVLSNLVFQREDEVLKAWADDHGWLYTRYADDLSFSSQKEISSWEMQQTINLLENHSYAVHPEKRRLYGPDDVKNVTRLVLGDGELELPPDFLEELRDCIEDLRRTTRTHLRMGVARPPAWLTKYRQRLNGMMGFAKHVLGEYDEDFLQI 321          
BLAST of mRNA_D-mesarthrocarpus_Contig9875.2.1 vs. uniprot
Match: A0A1I6SRB9_9FLAO (RNA-directed DNA polymerase n=1 Tax=Lutibacter maritimus TaxID=593133 RepID=A0A1I6SRB9_9FLAO)

HSP 1 Score: 217 bits (552), Expect = 8.690e-65
Identity = 117/310 (37.74%), Postives = 184/310 (59.35%), Query Frame = 1
Query:   31 QNKAIFCHLNSTNALSRVLKTEKRKLLLMARQPKYRTFTIPKKEGGERLIETPDASVKHLLSQLNRYLQSIYMLEKTTAAYGFITGVKNDVDRRNVVTNAKKHLGKPYLLNIDLKDFFHSISKDQVIEIFRTRPFKFKLDMAELLASLCTYQDRLPMGTPTSPVLSNFACRPLDQELLAFSADMIWNYTRYADDMSFSS-NRIIAAEKIHSVRQIIEKHGFTVNEKKVVVFGPDDDKIVTGLLVNEKVELAPGYLEELEEEVLRLGEVLRTQNEQGQINT-KWVEKYKQQVRGRISFAGFVLNRRDERYM 954
            +N+   C   +   +S +L   K +LLL +  P+Y  F+IPKK G  R+IE P+ S+K L   LN+YLQ++Y L ++  +YG++  +  +   +N+ TNA +HL KP++LN D KDFFH I  D V +IF++  F F +  A  LA LC Y+DRLPMGTPTSPVLSN     LD ELL ++     +YTR+ DD++FSS     +      + +I  +H    NE+K      DD K VTGL++N  V++   Y  EL ++++RL  V+      G+ +   +++ +KQ++ G+I+F G +  R  ++++
Sbjct:   15 ENQIFNC--KTLEEISVLLNCSKNELLLHSYNPEYYQFSIPKKSGTFRIIEAPNESLKRLQRNLNQYLQAVYYLNQSVCSYGYVISILGEKQTKNIYTNATQHLAKPFMLNTDFKDFFHQIKIDDVTQIFKSEFFNFDIYTATTLAKLCCYKDRLPMGTPTSPVLSNLYTLKLDNELLQWAKKHNTSYTRFVDDLTFSSVTTSFSPLHFKQINEIALRHKLNFNEEKTRYLNSDDIKTVTGLVLNTTVDIDNAYYLELGKDLIRLKNVMEVYYITGKTHIITFLKTFKQELFGKINFIGTIEGRNSKQFL 322          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9875.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A098S581_9BACT1.560e-13559.94Reverse transcriptase domain-containing protein n=... [more]
F4L2L2_HALH11.560e-12856.04RNA-directed DNA polymerase n=1 Tax=Haliscomenobac... [more]
A0A7V5BGL2_9BACT3.820e-8545.00RNA-directed DNA polymerase n=1 Tax=Saprospiraceae... [more]
A0A838Z0D8_9BACT4.540e-7642.09RNA-directed DNA polymerase n=1 Tax=Emticicia sp. ... [more]
UPI0003F7B4EC1.190e-7342.91reverse transcriptase family protein n=1 Tax=Runel... [more]
A0A4Q2UMN3_9BACT1.320e-7341.69RNA-directed DNA polymerase n=2 Tax=Spirosoma sord... [more]
A0A3M1J9V0_9BACT2.410e-7041.72RNA-directed DNA polymerase n=1 Tax=Bacteroidetes ... [more]
A0A1H9HCR5_9BACT4.400e-6942.24Reverse transcriptase (RNA-dependent DNA polymeras... [more]
A0A7V2W497_9BACT8.280e-6842.91RNA-directed DNA polymerase n=1 Tax=Bacteroidetes ... [more]
A0A1I6SRB9_9FLAO8.690e-6537.74RNA-directed DNA polymerase n=1 Tax=Lutibacter mar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9875contigD-mesarthrocarpus_Contig9875:3550..4515 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog760192.Halhy_6108
PFAMsRVT_1
Model size966
Max annot lvl976|Bacteroidetes
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.55e-129
EggNOG OGsCOG3344@1|root,COG3344@2|Bacteria,4NGJQ@976|Bacteroidetes,1IX3E@117747|Sphingobacteriia
DescriptionPFAM RNA-directed DNA polymerase (Reverse transcriptase)
Cds size966
COG categoryL
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791138.3922312-CDS-D-mesarthrocarpus_Contig9875:3549..45151680791138.3922312-CDS-D-mesarthrocarpus_Contig9875:3549..4515Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9875 3550..4515 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9875.2.1prot_D-mesarthrocarpus_Contig9875.2.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9875 3550..4515 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9875.2.1

>prot_D-mesarthrocarpus_Contig9875.2.1 ID=prot_D-mesarthrocarpus_Contig9875.2.1|Name=mRNA_D-mesarthrocarpus_Contig9875.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=322bp
LEKRTLARHRQNKAIFCHLNSTNALSRVLKTEKRKLLLMARQPKYRTFTI
PKKEGGERLIETPDASVKHLLSQLNRYLQSIYMLEKTTAAYGFITGVKND
VDRRNVVTNAKKHLGKPYLLNIDLKDFFHSISKDQVIEIFRTRPFKFKLD
MAELLASLCTYQDRLPMGTPTSPVLSNFACRPLDQELLAFSADMIWNYTR
YADDMSFSSNRIIAAEKIHSVRQIIEKHGFTVNEKKVVVFGPDDDKIVTG
LLVNEKVELAPGYLEELEEEVLRLGEVLRTQNEQGQINTKWVEKYKQQVR
GRISFAGFVLNRRDERYMALRD
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mRNA from alignment at D-mesarthrocarpus_Contig9875:3550..4515+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9875.2.1 ID=mRNA_D-mesarthrocarpus_Contig9875.2.1|Name=mRNA_D-mesarthrocarpus_Contig9875.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=966bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9875:3550..4515+ (Discosporangium mesarthrocarpum MT17_79)
TTGGAAAAACGAACATTAGCCCGCCATCGGCAAAATAAGGCTATTTTTTG CCACCTCAACAGTACCAATGCCCTCAGCAGGGTACTAAAAACGGAGAAAC GCAAGTTGCTCCTCATGGCCCGCCAACCTAAGTACCGCACCTTTACCATA CCAAAAAAGGAAGGAGGGGAACGCCTCATTGAAACACCGGATGCCAGCGT AAAGCACTTACTTTCACAACTCAATAGATATCTACAGAGTATCTACATGT TGGAGAAAACTACCGCTGCGTACGGCTTCATCACTGGAGTGAAAAATGAT GTAGATCGACGCAATGTAGTCACCAATGCGAAAAAACACTTGGGTAAACC TTACTTATTGAATATCGACCTGAAAGATTTTTTCCACTCCATCTCTAAGG ATCAGGTAATTGAAATATTCAGGACTCGTCCCTTCAAATTCAAACTCGAT ATGGCGGAACTGTTAGCAAGCCTCTGTACCTATCAGGACCGACTACCCAT GGGCACCCCTACCTCCCCAGTACTCTCCAATTTTGCTTGTCGCCCCCTCG ATCAGGAACTGCTAGCCTTTTCGGCGGATATGATCTGGAATTATACCCGA TATGCTGATGACATGAGCTTTTCCTCCAATCGGATCATAGCTGCGGAGAA GATCCATTCGGTGCGTCAGATTATCGAAAAGCATGGCTTTACCGTCAATG AAAAGAAGGTTGTCGTATTTGGACCGGATGATGATAAGATCGTCACAGGA TTGTTGGTCAATGAGAAGGTAGAGCTGGCTCCGGGGTACCTGGAAGAACT AGAGGAAGAAGTGCTACGATTAGGTGAAGTACTCCGTACTCAAAATGAAC AAGGACAAATCAATACCAAATGGGTGGAAAAGTACAAGCAGCAAGTTCGG GGAAGGATCAGTTTCGCTGGCTTTGTGCTGAACCGAAGAGATGAACGATA CATGGCCTTGCGTGAT
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9875:3550..4515+

>mRNA_D-mesarthrocarpus_Contig9875.2.1 ID=mRNA_D-mesarthrocarpus_Contig9875.2.1|Name=mRNA_D-mesarthrocarpus_Contig9875.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=966bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9875:3550..4515+ (Discosporangium mesarthrocarpum MT17_79)
TTGGAAAAACGAACATTAGCCCGCCATCGGCAAAATAAGGCTATTTTTTG
CCACCTCAACAGTACCAATGCCCTCAGCAGGGTACTAAAAACGGAGAAAC
GCAAGTTGCTCCTCATGGCCCGCCAACCTAAGTACCGCACCTTTACCATA
CCAAAAAAGGAAGGAGGGGAACGCCTCATTGAAACACCGGATGCCAGCGT
AAAGCACTTACTTTCACAACTCAATAGATATCTACAGAGTATCTACATGT
TGGAGAAAACTACCGCTGCGTACGGCTTCATCACTGGAGTGAAAAATGAT
GTAGATCGACGCAATGTAGTCACCAATGCGAAAAAACACTTGGGTAAACC
TTACTTATTGAATATCGACCTGAAAGATTTTTTCCACTCCATCTCTAAGG
ATCAGGTAATTGAAATATTCAGGACTCGTCCCTTCAAATTCAAACTCGAT
ATGGCGGAACTGTTAGCAAGCCTCTGTACCTATCAGGACCGACTACCCAT
GGGCACCCCTACCTCCCCAGTACTCTCCAATTTTGCTTGTCGCCCCCTCG
ATCAGGAACTGCTAGCCTTTTCGGCGGATATGATCTGGAATTATACCCGA
TATGCTGATGACATGAGCTTTTCCTCCAATCGGATCATAGCTGCGGAGAA
GATCCATTCGGTGCGTCAGATTATCGAAAAGCATGGCTTTACCGTCAATG
AAAAGAAGGTTGTCGTATTTGGACCGGATGATGATAAGATCGTCACAGGA
TTGTTGGTCAATGAGAAGGTAGAGCTGGCTCCGGGGTACCTGGAAGAACT
AGAGGAAGAAGTGCTACGATTAGGTGAAGTACTCCGTACTCAAAATGAAC
AAGGACAAATCAATACCAAATGGGTGGAAAAGTACAAGCAGCAAGTTCGG
GGAAGGATCAGTTTCGCTGGCTTTGTGCTGAACCGAAGAGATGAACGATA
CATGGCCTTGCGTGAT
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