Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 1 |
| Model size | 471 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Cds size | 456 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791138.2161689-UTR-D-mesarthrocarpus_Contig9872:3039..3052 | 1680791138.2161689-UTR-D-mesarthrocarpus_Contig9872:3039..3052 | Discosporangium mesarthrocarpum MT17_79 | UTR | D-mesarthrocarpus_Contig9872 3040..3052 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791138.2268295-CDS-D-mesarthrocarpus_Contig9872:3052..3253 | 1680791138.2268295-CDS-D-mesarthrocarpus_Contig9872:3052..3253 | Discosporangium mesarthrocarpum MT17_79 | CDS | D-mesarthrocarpus_Contig9872 3053..3253 + |
| 1680791138.236503-CDS-D-mesarthrocarpus_Contig9872:4215..4470 | 1680791138.236503-CDS-D-mesarthrocarpus_Contig9872:4215..4470 | Discosporangium mesarthrocarpum MT17_79 | CDS | D-mesarthrocarpus_Contig9872 4216..4470 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig9872.3.1 >prot_D-mesarthrocarpus_Contig9872.3.1 ID=prot_D-mesarthrocarpus_Contig9872.3.1|Name=mRNA_D-mesarthrocarpus_Contig9872.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=152bp
MIPGREDRRPIVEWSPFRSNYFALCGGFNEGIDLYRIRHGGAARRRTSAS
IHRDEAVVGGGSPSPSVGVGGGAVGAGVVIPGAGGRPGPGMGAQGPHLLP
RGYVRVAPDARWSALEPGTYGPDIRAPPEIPLTPSSTPGSSVFGGGGGSG
GG back to topmRNA from alignment at D-mesarthrocarpus_Contig9872:3040..4470+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_D-mesarthrocarpus_Contig9872.3.1 ID=mRNA_D-mesarthrocarpus_Contig9872.3.1|Name=mRNA_D-mesarthrocarpus_Contig9872.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1431bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9872:3040..4470+ (Discosporangium mesarthrocarpum MT17_79)
AGGGGGTGACATCATGATCCCGGGAAGGGAAGATCGGCGACCCATTGTGG
AATGGTCTCCATTCCGGTCCAACTACTTCGCTCTTTGTGGGGGTTTCAAT
GAGGGCATTGATCTTTATCGCATAAGACACGGCGGTGCCGCCAGACGGAG
AACTTCTGCAAGTATCCATAGAGATGAAGCTGTCGTAGGGGGAGGCAGTC
CATCGCCCAGTGTGGTGAGGGATAGAGCGCTTGGCGTGCAAGTGTGGAAA
GTGTTTCTTTTTGGTCTGTGTTCCAGGTGTTGATGCTCGTCTCCCGTTTC
CTTCTCGTACCTTATACATGCCTCCATATATGTTTCCAGTCTTTCGTGTC
TCAGTGGGTCACTCCATATCTCTTGCGGTGCCATCCACAGCCCCTGACCG
CCTGGAAATCGGGGTGATATTTTTTGATGTCTCGGGCGTGTACCTGTGCC
CGTCCGTCCGACCGTCATTTGCAACACGAAAGTAACCCTAATCCCAATCT
CATCCATACTACTAACGTGGACTCTAAGGTAAGGGCAAGGTAACCGTCCA
AATAGAAACTTTGCCTCACTCGCTCAACCCCCTGTCTAAAAGCCCTGTAG
TAAACAGGTGGTGGCCTCGCAACCCGAGCAATACCCCTAAACCTGGATCT
TATCCAAACACCAACCCTAGCCCTAGCCCTAGCCCTAGCCCTAACCCTAG
CCCTAACCCCGGTCCGTCATTGGCCCATCAAAACACCATGAATTCCACCC
CCCTGATATGACCCAGTTCCTCACGGAGCCCAAACCTCTGCTTTCTCACG
TGGGAGTTCACCCAGGCTTGCTTACTTGGCTTTGTTCTTCCTCCTTTCAA
GACTCAGCCGATCCAATGAATGATTAAGCGGTGTGGGTGTATCTATAGCC
GATCTGTGATGTGCTTTCGGCTCTGACAACATGTGAAAGGATAGGCTGAA
ACTTCACCTCAGCTGACATTCCCCACCACCTCTCCATTTATTTGGTCCCC
CGGGTACCCCCATTATCCCCTCATCACCCTCCCATGAAAGTTAAAAAGGG
ATAACTTGAAGGTAAGCCTCCCCTTCAAATTACCTGCCCCATCCCCATCT
AAACCTTATATTAACATCAAACCTAACCCTAACCTTCACCCTGTGCCCTT
CCCTGACTGTGTTCTTTAACCTCCAGGGAGTCGGAGGAGGGGCTGTGGGG
GCAGGAGTAGTCATACCAGGTGCCGGGGGCCGCCCAGGGCCAGGGATGGG
CGCCCAGGGTCCACACCTCCTGCCTCGGGGCTATGTCCGGGTCGCCCCAG
ACGCCCGTTGGTCTGCCCTGGAGCCGGGCACTTATGGCCCAGACATCCGG
GCCCCTCCAGAGATTCCTCTCACCCCCTCCTCCACCCCTGGGAGTTCCGT
GTTTGGGGGTGGGGGTGGGAGCGGAGGCGGG back to topCoding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9872:3040..4470+ >mRNA_D-mesarthrocarpus_Contig9872.3.1 ID=mRNA_D-mesarthrocarpus_Contig9872.3.1|Name=mRNA_D-mesarthrocarpus_Contig9872.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=456bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9872:3040..4470+ (Discosporangium mesarthrocarpum MT17_79)
ATGATCCCGGGAAGGGAAGATCGGCGACCCATTGTGGAATGGTCTCCATT
CCGGTCCAACTACTTCGCTCTTTGTGGGGGTTTCAATGAGGGCATTGATC
TTTATCGCATAAGACACGGCGGTGCCGCCAGACGGAGAACTTCTGCAAGT
ATCCATAGAGATGAAGCTGTCGTAGGGGGAGGCAGTCCATCGCCCAGTGT
GGGAGTCGGAGGAGGGGCTGTGGGGGCAGGAGTAGTCATACCAGGTGCCG
GGGGCCGCCCAGGGCCAGGGATGGGCGCCCAGGGTCCACACCTCCTGCCT
CGGGGCTATGTCCGGGTCGCCCCAGACGCCCGTTGGTCTGCCCTGGAGCC
GGGCACTTATGGCCCAGACATCCGGGCCCCTCCAGAGATTCCTCTCACCC
CCTCCTCCACCCCTGGGAGTTCCGTGTTTGGGGGTGGGGGTGGGAGCGGA
GGCGGG back to top
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