mRNA_D-mesarthrocarpus_Contig9871.1.3 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9871.1.3 vs. uniprot
Match: D7FN81_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN81_ECTSI) HSP 1 Score: 309 bits (791), Expect = 2.040e-93 Identity = 154/211 (72.99%), Postives = 167/211 (79.15%), Query Frame = 1
Query: 34 QAVYIAPLKALARERLKDWREKFGKKLGLQVLELTGDHTPDMASTALERAKVIITTPEKWDGVTRGWRRRDYVRDTSLVVSGPLLAQIMDEVHLLGEDRGPVLEVIVSRMRYIAAXXXXXXXXXXXXXXXXXXXXEGGPQRQVRFLGLSTALANPRDLGDWLGVKDTGVYNFRPSVRPIPCEVHIQGYQGKHYCPRMATMNKPTYAAIMEH 666
+AVY+APLKALARERLKDWREKFGKK+ + VLELTGDHTPD AL RA +I+TTPEKWDGVTRGW+ RDYV+DT LV IMDE+HLLGEDRGPVLEVIVSRMRYIAA G RQVRF+GLSTALANPRDL DWLGVKD+G+YNFRPSVRPIPCEVHIQGY GKHYCPRMA+MNKPTYAAIMEH
Sbjct: 1505 KAVYVAPLKALARERLKDWREKFGKKMDMGVLELTGDHTPD--GDALRRASIIVTTPEKWDGVTRGWKSRDYVKDTGLV--------IMDEIHLLGEDRGPVLEVIVSRMRYIAASAGKRDT--------------GTGHRQVRFVGLSTALANPRDLADWLGVKDSGLYNFRPSVRPIPCEVHIQGYPGKHYCPRMASMNKPTYAAIMEH 1691
BLAST of mRNA_D-mesarthrocarpus_Contig9871.1.3 vs. uniprot
Match: A0A7S2FFY0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FFY0_9STRA) HSP 1 Score: 258 bits (659), Expect = 8.150e-83 Identity = 134/214 (62.62%), Postives = 156/214 (72.90%), Query Frame = 1
Query: 34 QAVYIAPLKALARERLKDWREKFGKKLGLQVLELTGDHTPDMASTALERAKVIITTPEKWDGVTRGWRRRDYVRDTSLVVSGPLLAQIMDEVHLLGEDRGPVLEVIVSRMRYIAAXXXXXXXXXXXXXXXXXXXXEGGPQRQVRFLGLSTALANPRDLGDWLGVKDT---GVYNFRPSVRPIPCEVHIQGYQGKHYCPRMATMNKPTYAAIMEH 666
+AVYIAPLKALARER+KDWR++FG+ LGL VLELTGD TPDMA AL RA +IITTPEKWDGVTR W++R+YVR +V I+DE+HLLGEDRGPVLEVIVSRMRYI+A ++ R +GLSTALAN DL DWLG+ G+YNFRPSVRP+ EVHI+G+ GKHYCPRMATMNKPTY+AIMEH
Sbjct: 30 KAVYIAPLKALARERVKDWRKRFGEGLGLCVLELTGDVTPDMA--ALRRADIIITTPEKWDGVTRSWQKREYVRAVRVV--------IIDEIHLLGEDRGPVLEVIVSRMRYISAQT----------------------DQECRLVGLSTALANAHDLADWLGIDPRPGRGMYNFRPSVRPVSMEVHIRGFPGKHYCPRMATMNKPTYSAIMEH 211
BLAST of mRNA_D-mesarthrocarpus_Contig9871.1.3 vs. uniprot
Match: A0A7S3UTV5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTV5_HETAK) HSP 1 Score: 258 bits (658), Expect = 5.620e-79 Identity = 136/213 (63.85%), Postives = 152/213 (71.36%), Query Frame = 1
Query: 34 QAVYIAPLKALARERLKDWREKFGKKLGLQVLELTGDHTPDMASTALERAKVIITTPEKWDGVTRGWRRRDYVRDTSLVVSGPLLAQIMDEVHLLGEDRGPVLEVIVSRMRYIAAXXXXXXXXXXXXXXXXXXXXEGGPQRQVRFLGLSTALANPRDLGDWLGVKDTGV--YNFRPSVRPIPCEVHIQGYQGKHYCPRMATMNKPTYAAIMEH 666
+AVYIAPLKALARERLKDWR K G LGL VLEL+GD TPD AL+RA V++ TPEKWDG+TR W+RR+YVR ++ I+DE+HLLGEDRGPVLEVIVSRMRYIA GG + R LGLSTALANPRDL DWLG+ +GV YNF PSVRPIP EVHIQGY GKHYCPRMATMNKPTY AI +H
Sbjct: 213 KAVYIAPLKALARERLKDWRRKLGGGLGLSVLELSGDVTPDFG--ALKRADVLVATPEKWDGITRQWQRREYVRQVRVL--------IIDEIHLLGEDRGPVLEVIVSRMRYIAEKT-------------------GG--QPCRVLGLSTALANPRDLADWLGIPPSGVGLYNFHPSVRPIPMEVHIQGYPGKHYCPRMATMNKPTYQAIQQH 394
BLAST of mRNA_D-mesarthrocarpus_Contig9871.1.3 vs. uniprot
Match: W7TU71_9STRA (Activating signal cointegrator 1 complex subunit 3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TU71_9STRA) HSP 1 Score: 263 bits (673), Expect = 1.470e-77 Identity = 134/211 (63.51%), Postives = 155/211 (73.46%), Query Frame = 1
Query: 34 QAVYIAPLKALARERLKDWREKFGKKLGLQVLELTGDHTPDMASTALERAKVIITTPEKWDGVTRGWRRRDYVRDTSLVVSGPLLAQIMDEVHLLGEDRGPVLEVIVSRMRYIAAXXXXXXXXXXXXXXXXXXXXEGGPQRQVRFLGLSTALANPRDLGDWLGVKDTGVYNFRPSVRPIPCEVHIQGYQGKHYCPRMATMNKPTYAAIMEH 666
+ VYIAPLKALARERL++WR+K GK LGL VLEL+GD TPD+A AL+RA +II TPEKWDG+TR W++RDYV D L+ IMDE+HLLGEDRGPVLEVIVSRMRYIAA R VR LGLSTALANP+DL DWLGV G++NFRPSVRPIP EVH+ G+ G+HYCPRMA+MNKPT+ AIMEH
Sbjct: 1430 KTVYIAPLKALARERLQEWRKKLGKILGLVVLELSGDVTPDVA--ALKRADIIIATPEKWDGITRNWKKRDYVGDVRLL--------IMDEIHLLGEDRGPVLEVIVSRMRYIAAQK----------------------HRSVRMLGLSTALANPQDLADWLGVGPEGLFNFRPSVRPIPMEVHVAGFPGRHYCPRMASMNKPTFQAIMEH 1608
BLAST of mRNA_D-mesarthrocarpus_Contig9871.1.3 vs. uniprot
Match: A0A7S0MNU7_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MNU7_9CRYP) HSP 1 Score: 240 bits (612), Expect = 6.560e-75 Identity = 116/211 (54.98%), Postives = 149/211 (70.62%), Query Frame = 1
Query: 34 QAVYIAPLKALARERLKDWREKFGKKLGLQVLELTGDHTPDMASTALERAKVIITTPEKWDGVTRGWRRRDYVRDTSLVVSGPLLAQIMDEVHLLGEDRGPVLEVIVSRMRYIAAXXXXXXXXXXXXXXXXXXXXEGGPQRQVRFLGLSTALANPRDLGDWLGVKDTGVYNFRPSVRPIPCEVHIQGYQGKHYCPRMATMNKPTYAAIMEH 666
+ +Y+AP+KAL RER+KDW + +LG +V+ELTGD PD + A+E A VI+TTPEKWDGV+RGWR+R +VR LVV +DEVHLLGEDRGPVLE IVSRMRYIA + +RF+G+STA+AN +D+ DWLGV + G++NF PSVRP+P +VHIQGY+GKHYCPRMATMNKP +AAI+++
Sbjct: 42 KVIYVAPMKALVRERIKDWGTRLRDRLGTRVVELTGDAAPD--ARAVEAADVIVTTPEKWDGVSRGWRQRGHVRRVGLVV--------IDEVHLLGEDRGPVLEAIVSRMRYIACRT----------------------ETPIRFVGMSTAIANAKDVADWLGVDEEGLFNFHPSVRPVPMQVHIQGYEGKHYCPRMATMNKPAFAAILDY 220
BLAST of mRNA_D-mesarthrocarpus_Contig9871.1.3 vs. uniprot
Match: A0A7S3M6M0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M6M0_9STRA) HSP 1 Score: 238 bits (608), Expect = 8.430e-75 Identity = 121/220 (55.00%), Postives = 147/220 (66.82%), Query Frame = 1
Query: 34 QAVYIAPLKALARERLKDWREKFGKK---------LGLQVLELTGDHTPDMASTALERAKVIITTPEKWDGVTRGWRRRDYVRDTSLVVSGPLLAQIMDEVHLLGEDRGPVLEVIVSRMRYIAAXXXXXXXXXXXXXXXXXXXXEGGPQRQVRFLGLSTALANPRDLGDWLGVKDTGVYNFRPSVRPIPCEVHIQGYQGKHYCPRMATMNKPTYAAIMEH 666
+ +Y+APLKALARERL+DW KFG + LGL++LELTGD TP M L R+ ++I TPEKWD ++RGW++R YV+ LV I+DE+HLLG DRGPVLEV+VSRMR+I+ +RF+GLSTALANPRDL DWLG+ D GVYNFR SVRP+P HIQGY GK+YCPRMATMNKP YAAI+EH
Sbjct: 15 KTIYVAPLKALARERLQDWNRKFGTQGGAGRKTPGLGLRILELTGDVTPSMEE--LNRSDILIVTPEKWDSISRGWQKRGYVQKVQLV--------IIDEIHLLGVDRGPVLEVLVSRMRFISTQTASP----------------------IRFVGLSTALANPRDLADWLGIGDVGVYNFRSSVRPVPLTSHIQGYPGKNYCPRMATMNKPCYAAILEH 202
BLAST of mRNA_D-mesarthrocarpus_Contig9871.1.3 vs. uniprot
Match: A0A482UF37_9ARCH (DEAD/DEAH box helicase (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UF37_9ARCH) HSP 1 Score: 249 bits (636), Expect = 1.750e-74 Identity = 131/208 (62.98%), Postives = 148/208 (71.15%), Query Frame = 1
Query: 34 QAVYIAPLKALARERLKDWREKFGKKLGLQVLELTGDHTPDMASTALERAKVIITTPEKWDGVTRGWRRRDYVRDTSLVVSGPLLAQIMDEVHLLGEDRGPVLEVIVSRMRYIAAXXXXXXXXXXXXXXXXXXXXEGGPQRQVRFLGLSTALANPRDLGDWLGVKDTGVYNFRPSVRPIPCEVHIQGYQGKHYCPRMATMNKPTYAAI 657
+ VYIAPLKAL ER+KDWR KFG + +V+ELTGD TPD+AS L RA +IITTPEKWDG++R W+RRDYVR SLVV +DE+HLLGE+RGPVLEVIVSRMRYIA R +RFLGLSTALAN DLGDWLGV +YNFRPSVRP+P EVHIQG+ GK YCPRMATMNKPTYAAI
Sbjct: 84 KVVYIAPLKALVSERIKDWRAKFGP-MRKEVVELTGDVTPDLAS--LHRADIIITTPEKWDGISRSWQRRDYVRRVSLVV--------IDEIHLLGEERGPVLEVIVSRMRYIATRTA----------------------RAIRFLGLSTALANAADLGDWLGVPPGSLYNFRPSVRPVPMEVHIQGFPGKAYCPRMATMNKPTYAAI 258
BLAST of mRNA_D-mesarthrocarpus_Contig9871.1.3 vs. uniprot
Match: A0A7S4MAC6_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4MAC6_9EUKA) HSP 1 Score: 240 bits (612), Expect = 1.030e-73 Identity = 113/209 (54.07%), Postives = 151/209 (72.25%), Query Frame = 1
Query: 40 VYIAPLKALARERLKDWREKFGKKLGLQVLELTGDHTPDMASTALERAKVIITTPEKWDGVTRGWRRRDYVRDTSLVVSGPLLAQIMDEVHLLGEDRGPVLEVIVSRMRYIAAXXXXXXXXXXXXXXXXXXXXEGGPQRQVRFLGLSTALANPRDLGDWLGVKDTGVYNFRPSVRPIPCEVHIQGYQGKHYCPRMATMNKPTYAAIMEH 666
VYI PLKAL +ER++DW++KFG+KL +V ELTGD TPD+ AL+R+ +I+TTPEKWDGV+RGW++R YV+ +LV I+DE+H+LG+DRGP+LEVIVSRMR+IA+ + R +GLST+LANP DL DWLG+++ G+YNF+PS+RPIP E HI G+ G+HYCPRMATMN+P + AI+EH
Sbjct: 24 VYIGPLKALVKERIRDWKKKFGEKLNRRVEELTGDVTPDLE--ALKRSDIILTTPEKWDGVSRGWKQRKYVQQVALV--------IIDEIHMLGQDRGPILEVIVSRMRFIASQL----------------------KHTCRIIGLSTSLANPLDLADWLGIENVGLYNFKPSIRPIPLEAHIAGFPGRHYCPRMATMNRPAFMAILEH 200
BLAST of mRNA_D-mesarthrocarpus_Contig9871.1.3 vs. uniprot
Match: H2Z647_CIOSA (Uncharacterized protein n=1 Tax=Ciona savignyi TaxID=51511 RepID=H2Z647_CIOSA) HSP 1 Score: 236 bits (603), Expect = 4.640e-73 Identity = 118/211 (55.92%), Postives = 146/211 (69.19%), Query Frame = 1
Query: 34 QAVYIAPLKALARERLKDWREKFGKKLGLQVLELTGDHTPDMASTALERAKVIITTPEKWDGVTRGWRRRDYVRDTSLVVSGPLLAQIMDEVHLLGEDRGPVLEVIVSRMRYIAAXXXXXXXXXXXXXXXXXXXXEGGPQRQVRFLGLSTALANPRDLGDWLGVKDTGVYNFRPSVRPIPCEVHIQGYQGKHYCPRMATMNKPTYAAIMEH 666
+AVY+AP+KAL RER+KDW ++ KLGL+++ELTGD PDM + A RA VIITTPEKWDGV+R W R YVR SL+ I+DE+HLLG+DRGPVLEVIVSR +I++ ++ VR +GLSTALAN RDL DWLG+K G++NFRPSVRP+P EVHIQG+ GKHYCPRMA+MNK + AI H
Sbjct: 50 KAVYVAPMKALVRERMKDWEKRLKTKLGLKLVELTGDIAPDMGAVA--RADVIITTPEKWDGVSRSWNTRGYVRKVSLL--------IIDEIHLLGQDRGPVLEVIVSRTNFISSHT----------------------EKAVRVVGLSTALANARDLADWLGIKQMGLFNFRPSVRPVPMEVHIQGFAGKHYCPRMASMNKTCFQAIQTH 228
BLAST of mRNA_D-mesarthrocarpus_Contig9871.1.3 vs. uniprot
Match: A0A7S0PBS9_CAFRO (Hypothetical protein (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0PBS9_CAFRO) HSP 1 Score: 249 bits (637), Expect = 9.800e-73 Identity = 126/211 (59.72%), Postives = 150/211 (71.09%), Query Frame = 1
Query: 34 QAVYIAPLKALARERLKDWREKFGKKLGLQVLELTGDHTPDMASTALERAKVIITTPEKWDGVTRGWRRRDYVRDTSLVVSGPLLAQIMDEVHLLGEDRGPVLEVIVSRMRYIAAXXXXXXXXXXXXXXXXXXXXEGGPQRQVRFLGLSTALANPRDLGDWLGVKDTGVYNFRPSVRPIPCEVHIQGYQGKHYCPRMATMNKPTYAAIMEH 666
+AVYIAPLKAL ER+KDW KFG+ +G +V+ELTGD TPD + AL+ A +++TTPEKWDG++R W+RR YV+ LV I+DE+HLLGEDRGPVLEVIVSRMR+IAA G P VR +GLSTALAN DL DWLG+ G+YNFRPSVRPIP +VHIQG+ GKHYCPRMATMNKP YAA+ EH
Sbjct: 900 KAVYIAPLKALVSERIKDWGRKFGEGMGKRVVELTGDVTPD--AKALQEADILVTTPEKWDGISRSWQRRGYVKKVGLV--------IIDEIHLLGEDRGPVLEVIVSRMRFIAAHT-------------------GSP---VRIVGLSTALANAADLADWLGIDRVGLYNFRPSVRPIPMDVHIQGFPGKHYCPRMATMNKPVYAAVAEH 1078 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9871.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig9871.1.3 >prot_D-mesarthrocarpus_Contig9871.1.3 ID=prot_D-mesarthrocarpus_Contig9871.1.3|Name=mRNA_D-mesarthrocarpus_Contig9871.1.3|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=217bp MKKCSFQAVYIAPLKALARERLKDWREKFGKKLGLQVLELTGDHTPDMASback to top mRNA from alignment at D-mesarthrocarpus_Contig9871:232..2836+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig9871.1.3 ID=mRNA_D-mesarthrocarpus_Contig9871.1.3|Name=mRNA_D-mesarthrocarpus_Contig9871.1.3|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2605bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9871:232..2836+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9871:232..2836+ >mRNA_D-mesarthrocarpus_Contig9871.1.3 ID=mRNA_D-mesarthrocarpus_Contig9871.1.3|Name=mRNA_D-mesarthrocarpus_Contig9871.1.3|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=651bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9871:232..2836+ (Discosporangium mesarthrocarpum MT17_79)back to top |