mRNA_D-mesarthrocarpus_Contig9870.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9870.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig9870.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9870.1.1 vs. uniprot
Match: D7G783_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G783_ECTSI)

HSP 1 Score: 129 bits (325), Expect = 7.210e-35
Identity = 60/102 (58.82%), Postives = 81/102 (79.41%), Query Frame = 1
Query:    1 QLSVYSIILYLPKAISSEGGFLSGWTLYTCLLAVLSASGGILVALSVKHTDSILKTFATSGSIIVCAVAGHYLMDAPLNIPIAAGAICAILSLLNYSDEGDP 306
            QL++YSI+ YLP A+  EG    GWT+   +L+VL ++GGILVAL++K+TD++LKTFATSG+IIV AV GH+ + +PL+IPI  GA C +LSLLNYSD+G P
Sbjct:   96 QLAMYSIVFYLPMALWDEGPLFQGWTVSAGILSVLGSAGGILVALTMKYTDAVLKTFATSGAIIVTAVGGHFTLGSPLDIPIGVGAGCTVLSLLNYSDDGAP 197          
BLAST of mRNA_D-mesarthrocarpus_Contig9870.1.1 vs. uniprot
Match: A0A6H5JE24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE24_9PHAE)

HSP 1 Score: 129 bits (325), Expect = 2.100e-33
Identity = 60/102 (58.82%), Postives = 81/102 (79.41%), Query Frame = 1
Query:    1 QLSVYSIILYLPKAISSEGGFLSGWTLYTCLLAVLSASGGILVALSVKHTDSILKTFATSGSIIVCAVAGHYLMDAPLNIPIAAGAICAILSLLNYSDEGDP 306
            QL++YSI+ YLP A+  EG    GWT+   +L+VL ++GGILVAL++K+TD++LKTFATSG+IIV AV GH+ + +PL+IPI  GA C +LSLLNYSD+G P
Sbjct:  261 QLAMYSIVFYLPMALWEEGPLFQGWTVNAGILSVLGSAGGILVALTMKYTDAVLKTFATSGAIIVTAVGGHFTLGSPLDIPIGVGAGCTVLSLLNYSDDGAP 362          
BLAST of mRNA_D-mesarthrocarpus_Contig9870.1.1 vs. uniprot
Match: A0A7S0RKE7_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RKE7_9CHLO)

HSP 1 Score: 96.7 bits (239), Expect = 3.570e-21
Identity = 49/100 (49.00%), Postives = 66/100 (66.00%), Query Frame = 1
Query:    1 QLSVYSIILYLPKA-ISSEGGFLSGWTLYTCLLAVLSASGGILVALSVKHTDSILKTFATSGSIIVCAVAGHYLMDAPLNIPIAAGAICAILSLLNYSDE 297
            QL+VYSI +YLP A + ++G  L GWT     +A+L ASGGILVALSV +++S+ KT A  G++++  V GH L  APLN PI  G    ILS+  Y D+
Sbjct:  253 QLAVYSIAIYLPMAWVETDGHLLEGWTWLVWCIAMLHASGGILVALSVLYSNSVTKTVAVCGALVLTTVLGHVLFGAPLNGPILLGCAVVILSIFGYRDD 352          
BLAST of mRNA_D-mesarthrocarpus_Contig9870.1.1 vs. uniprot
Match: A0A7S4IBD2_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4IBD2_9EUKA)

HSP 1 Score: 89.4 bits (220), Expect = 2.500e-19
Identity = 45/103 (43.69%), Postives = 66/103 (64.08%), Query Frame = 1
Query:    1 QLSVYSIILYLPKAI--SSEGGFLSGWTLYTCLLAVLSASGGILVALSVKHTDSILKTFATSGSIIVCAVAGHYLMDAPLNIPIAAGAICAILSLLNYSDEGD 303
            QL+ +S I+Y P     + E  F +GWT  T     + A GG+LVALS+KH DSI+KT AT+G+I++  V     M+ P  +PI +GA+  ++S+ NY+DEGD
Sbjct:  130 QLAFWSSIMYTPLMFYDNPENPF-AGWTWVTAGCGFVGALGGVLVALSIKHADSIMKTIATTGAIVLTTVLNAAFMNGPCTLPIISGALVVVVSVFNYNDEGD 231          
BLAST of mRNA_D-mesarthrocarpus_Contig9870.1.1 vs. uniprot
Match: A0A7S3S1P2_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3S1P2_9SPIT)

HSP 1 Score: 88.2 bits (217), Expect = 4.580e-19
Identity = 42/103 (40.78%), Postives = 65/103 (63.11%), Query Frame = 1
Query:    1 QLSVYSIILYLPKAI-SSEGGFLSGWTLYTCLLAVLSASGGILVALSVKHTDSILKTFATSGSIIVCAVAGHYLMDAPLNIPIAAGAICAILSLLNYSDEGDP 306
            QL+ +SII+Y P  +  +      GWT    + A +   GG+LVALS+K+ DSI+KT AT+G+I+   +     +D P  +PI AGA+  ++S+ NY+D+GDP
Sbjct:  106 QLAFWSIIIYTPIMLYDNPRRPFQGWTAMAGVCAFVGGVGGVLVALSIKYADSIMKTIATTGAIVFTTILNAAFLDGPFTLPIMAGAVIVMVSVCNYNDKGDP 208          
BLAST of mRNA_D-mesarthrocarpus_Contig9870.1.1 vs. uniprot
Match: X6PD05_RETFI (Uncharacterized protein n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6PD05_RETFI)

HSP 1 Score: 89.4 bits (220), Expect = 6.550e-19
Identity = 39/100 (39.00%), Postives = 64/100 (64.00%), Query Frame = 1
Query:    1 QLSVYSIILYLPKAISSEGGFLSGWTLYTCLLAVLSASGGILVALSVKHTDSILKTFATSGSIIVCAVAGHYLMDAPLNIPIAAGAICAILSLLNYSDEG 300
            QL+V+S +LY P       G+   WT  T ++++L ASGG+LVA S+K+TD+I+K  ATSG+I++ A  G   ++ P  IP+A  +I  ++++  Y  +G
Sbjct:  187 QLAVFSFLLYFPSL--HNDGYFKNWTAITLIISILGASGGLLVAFSMKYTDAIIKALATSGAIVLAATGGAIWLNGPFGIPVAVSSISVVVAIFTYVTDG 284          
BLAST of mRNA_D-mesarthrocarpus_Contig9870.1.1 vs. uniprot
Match: R1DFE3_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DFE3_EMIHU)

HSP 1 Score: 90.5 bits (223), Expect = 6.900e-19
Identity = 44/103 (42.72%), Postives = 65/103 (63.11%), Query Frame = 1
Query:    1 QLSVYSIILYLPKAISSEGGF-LSGWTLYTCLLAVLSASGGILVALSVKHTDSILKTFATSGSIIVCAVAGHYLMDAPLNIPIAAGAICAILSLLNYSDEGDP 306
            QL+ +SI++Y P  +    G    GWT      A + A+GG+LVALS+K+ DSILKT ATSG+I++       L+D P  + I AGAI  + ++ +Y+D+GDP
Sbjct:  264 QLAFWSILIYTPIMLHDRPGDPFGGWTPMAAACAAIGAAGGVLVALSIKYADSILKTIATSGAIVLTTALNAALLDGPWGLSIIAGAIVVVTAVFDYNDKGDP 366          
BLAST of mRNA_D-mesarthrocarpus_Contig9870.1.1 vs. uniprot
Match: A0A7S3RKY8_EMIHU (Hypothetical protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3RKY8_EMIHU)

HSP 1 Score: 90.5 bits (223), Expect = 7.220e-19
Identity = 42/103 (40.78%), Postives = 65/103 (63.11%), Query Frame = 1
Query:    1 QLSVYSIILYLPKAISSEGGF-LSGWTLYTCLLAVLSASGGILVALSVKHTDSILKTFATSGSIIVCAVAGHYLMDAPLNIPIAAGAICAILSLLNYSDEGDP 306
            QL+ +SI++Y P  I        +GWT    + A +  +GG+LVALS+K+ DSI+KT AT+G+I+   +     +D P  +PI AGA+  ++S+ NY+D GDP
Sbjct:  286 QLAFWSILIYTPIMIHDNPRQPFAGWTPMAAVCAAVGGTGGVLVALSIKYADSIMKTIATTGAIVFTTILNAAFLDGPFTLPIVAGAVVVMVSVCNYNDRGDP 388          
BLAST of mRNA_D-mesarthrocarpus_Contig9870.1.1 vs. uniprot
Match: A0A7S0EIZ6_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EIZ6_9EUKA)

HSP 1 Score: 89.7 bits (221), Expect = 1.150e-18
Identity = 42/102 (41.18%), Postives = 68/102 (66.67%), Query Frame = 1
Query:    1 QLSVYSIILYLPKAI-SSEGGFLSGWTLYTCLLAVLSASGGILVALSVKHTDSILKTFATSGSIIVCAVAGHYLMDAPLNIPIAAGAICAILSLLNYSDEGD 303
            QL+ +S+++YLP  I  +     +GW+  T + A + A GG+LVALS+K  DSI+KT AT+G+I++        +D P ++PIA+GA+  ++S+ NY+D GD
Sbjct:  265 QLAFWSMVIYLPIMIYDNPNNPFAGWSGTTAVCAAVGALGGVLVALSIKLADSIMKTIATTGAIVLTTALNAVFLDGPYSLPIASGALVVVVSVFNYNDNGD 366          
BLAST of mRNA_D-mesarthrocarpus_Contig9870.1.1 vs. uniprot
Match: A0A0M0JIG0_9EUKA (Udp-n-acetylglucosamine n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JIG0_9EUKA)

HSP 1 Score: 89.4 bits (220), Expect = 1.520e-18
Identity = 43/102 (42.16%), Postives = 63/102 (61.76%), Query Frame = 1
Query:    1 QLSVYSIILYLPKAISSEGGF-LSGWTLYTCLLAVLSASGGILVALSVKHTDSILKTFATSGSIIVCAVAGHYLMDAPLNIPIAAGAICAILSLLNYSDEGD 303
            QL+ +S+++Y P  +         GW++ T L A   A GG+LVALS+K+TDSI+KT AT+GSI++  V     +  P  +PI  G I  ++S+ NYSD GD
Sbjct:  259 QLAFWSMLIYAPIMLYDRPNDPFGGWSVITLLCAACGALGGVLVALSIKYTDSIMKTIATTGSIVLTTVLNAAFLQGPFTLPILTGTIVVVISVFNYSDPGD 360          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9870.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G783_ECTSI7.210e-3558.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JE24_9PHAE2.100e-3358.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S0RKE7_9CHLO3.570e-2149.00Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
A0A7S4IBD2_9EUKA2.500e-1943.69Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
A0A7S3S1P2_9SPIT4.580e-1940.78Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]
X6PD05_RETFI6.550e-1939.00Uncharacterized protein n=1 Tax=Reticulomyxa filos... [more]
R1DFE3_EMIHU6.900e-1942.72Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
A0A7S3RKY8_EMIHU7.220e-1940.78Hypothetical protein n=2 Tax=Emiliania huxleyi Tax... [more]
A0A7S0EIZ6_9EUKA1.150e-1841.18Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A0M0JIG0_9EUKA1.520e-1842.16Udp-n-acetylglucosamine n=1 Tax=Chrysochromulina t... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9870contigD-mesarthrocarpus_Contig9870:48..434 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7G783
PFAMsNuc_sug_transp
Model size387
Max annot lvl2759|Eukaryota
KEGG koko:K15272
KEGG TC2.A.7.12
Hectar predicted targeting categorysignal anchor
Exons1
Evalue1.18e-35
EggNOG OGsCOG0697@1|root,KOG2234@2759|Eukaryota
Ec32 ortholog descriptionUDP-galactose transporter
Ec32 orthologEc-01_010710.1
Descriptionpyrimidine nucleotide-sugar transmembrane transporter activity
Cds size387
COG categoryEG
BRITEko00000,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791138.0598972-CDS-D-mesarthrocarpus_Contig9870:47..4341680791138.0598972-CDS-D-mesarthrocarpus_Contig9870:47..434Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9870 48..434 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9870.1.1prot_D-mesarthrocarpus_Contig9870.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9870 48..434 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9870.1.1

>prot_D-mesarthrocarpus_Contig9870.1.1 ID=prot_D-mesarthrocarpus_Contig9870.1.1|Name=mRNA_D-mesarthrocarpus_Contig9870.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=129bp
QLSVYSIILYLPKAISSEGGFLSGWTLYTCLLAVLSASGGILVALSVKHT
DSILKTFATSGSIIVCAVAGHYLMDAPLNIPIAAGAICAILSLLNYSDEG
DPGMGTGGPGAPPGRWKGGTGAGGGAGSG
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mRNA from alignment at D-mesarthrocarpus_Contig9870:48..434+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9870.1.1 ID=mRNA_D-mesarthrocarpus_Contig9870.1.1|Name=mRNA_D-mesarthrocarpus_Contig9870.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=387bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9870:48..434+ (Discosporangium mesarthrocarpum MT17_79)
CAGCTGTCAGTGTACTCCATTATCTTGTACCTACCGAAGGCCATATCATC AGAGGGAGGCTTCCTGTCGGGGTGGACCCTCTACACATGCCTCTTGGCTG TACTCAGTGCCTCTGGGGGCATCCTGGTGGCCCTGAGCGTGAAGCACACC GACTCTATCCTCAAGACATTCGCGACCTCGGGGTCCATTATTGTCTGTGC TGTCGCCGGGCATTACCTAATGGATGCACCTCTCAACATACCCATCGCTG CTGGGGCCATATGTGCCATCCTGTCTCTACTGAACTACAGCGACGAGGGG GATCCAGGGATGGGGACAGGCGGCCCCGGGGCGCCCCCGGGCAGGTGGAA AGGGGGCACAGGGGCTGGTGGCGGGGCGGGCAGCGGC
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9870:48..434+

>mRNA_D-mesarthrocarpus_Contig9870.1.1 ID=mRNA_D-mesarthrocarpus_Contig9870.1.1|Name=mRNA_D-mesarthrocarpus_Contig9870.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=387bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9870:48..434+ (Discosporangium mesarthrocarpum MT17_79)
CAGCTGTCAGTGTACTCCATTATCTTGTACCTACCGAAGGCCATATCATC
AGAGGGAGGCTTCCTGTCGGGGTGGACCCTCTACACATGCCTCTTGGCTG
TACTCAGTGCCTCTGGGGGCATCCTGGTGGCCCTGAGCGTGAAGCACACC
GACTCTATCCTCAAGACATTCGCGACCTCGGGGTCCATTATTGTCTGTGC
TGTCGCCGGGCATTACCTAATGGATGCACCTCTCAACATACCCATCGCTG
CTGGGGCCATATGTGCCATCCTGTCTCTACTGAACTACAGCGACGAGGGG
GATCCAGGGATGGGGACAGGCGGCCCCGGGGCGCCCCCGGGCAGGTGGAA
AGGGGGCACAGGGGCTGGTGGCGGGGCGGGCAGCGGC
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