mRNA_D-mesarthrocarpus_Contig9862.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9862.2.1
Unique NamemRNA_D-mesarthrocarpus_Contig9862.2.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9862.2.1 vs. uniprot
Match: A0A4Q9LWQ4_9MICR (Uncharacterized protein (Fragment) n=1 Tax=Hamiltosporidium tvaerminnensis TaxID=1176355 RepID=A0A4Q9LWQ4_9MICR)

HSP 1 Score: 92.4 bits (228), Expect = 3.080e-19
Identity = 51/115 (44.35%), Postives = 70/115 (60.87%), Query Frame = 1
Query:    1 VKPTLDDKQRVDWLVFVLSHLH-RRGGSGVFDDMFDWVHVYEKWFYLMKDGKN-----STCNRTRRASNKRFVFKMIILAAVARPR-KLSNGVWFDGKIGIWPIADVVTAARQRK 324
            VKPTL DK ++D L F LS ++    G  +FDD++D+VH+ EKWFYL K  ++     +  N  R   +KRF+ K++ +AAVARPR      ++FDGKIGIWP      A R  K
Sbjct:   93 VKPTLTDKNKMDRLKFCLSKVNLANNGDLLFDDLYDYVHIDEKWFYLTKVKRSYYLMLNEENPERNCKSKRFITKIMFMAAVARPRYDAHRKLYFDGKIGIWPFVYQEPARRNSK 207          
BLAST of mRNA_D-mesarthrocarpus_Contig9862.2.1 vs. uniprot
Match: A0A4Q9LXX8_9MICR (Uncharacterized protein (Fragment) n=1 Tax=Hamiltosporidium tvaerminnensis TaxID=1176355 RepID=A0A4Q9LXX8_9MICR)

HSP 1 Score: 91.7 bits (226), Expect = 4.180e-19
Identity = 50/115 (43.48%), Postives = 70/115 (60.87%), Query Frame = 1
Query:    1 VKPTLDDKQRVDWLVFVLSHLH-RRGGSGVFDDMFDWVHVYEKWFYLMKDGKN-----STCNRTRRASNKRFVFKMIILAAVARPR-KLSNGVWFDGKIGIWPIADVVTAARQRK 324
            VKPTL DK ++D L F LS ++    G  +FDD++D+VH+ +KWFYL K  ++     +  N  R   +KRF+ K++ +AAVARPR      ++FDGKIGIWP      A R  K
Sbjct:  108 VKPTLTDKNKMDRLKFCLSKVNLANNGDLLFDDLYDYVHIDKKWFYLTKVKRSYYLMLNEENPERNCKSKRFITKIMFMAAVARPRYDAHRKLYFDGKIGIWPFVYQAPAQRNSK 222          
BLAST of mRNA_D-mesarthrocarpus_Contig9862.2.1 vs. uniprot
Match: A0A4Q9LQK2_9MICR (Uncharacterized protein (Fragment) n=3 Tax=Hamiltosporidium TaxID=1176354 RepID=A0A4Q9LQK2_9MICR)

HSP 1 Score: 90.1 bits (222), Expect = 9.380e-19
Identity = 48/104 (46.15%), Postives = 67/104 (64.42%), Query Frame = 1
Query:    1 VKPTLDDKQRVDWLVFVLSHLH-RRGGSGVFDDMFDWVHVYEKWFYLMKDGKN-----STCNRTRRASNKRFVFKMIILAAVARPR-KLSNGVWFDGKIGIWPI 291
            VKPTL DK ++D L F LS ++    G  +FDD++D+VH+ EKWFYL K  ++     +  N  R   +KRF+ K++ +AAVARPR      ++FDGKIGIWP 
Sbjct:  109 VKPTLTDKNKMDRLKFCLSKVNLANNGDLLFDDLYDYVHIDEKWFYLTKVKRSYYLMLNEENPERNCKSKRFITKIMFMAAVARPRYDAHRKLYFDGKIGIWPF 212          
BLAST of mRNA_D-mesarthrocarpus_Contig9862.2.1 vs. uniprot
Match: A0A4V2JXP6_9MICR (Uncharacterized protein n=2 Tax=Hamiltosporidium tvaerminnensis TaxID=1176355 RepID=A0A4V2JXP6_9MICR)

HSP 1 Score: 90.1 bits (222), Expect = 7.580e-18
Identity = 49/115 (42.61%), Postives = 73/115 (63.48%), Query Frame = 1
Query:    1 VKPTLDDKQRVDWLVFVLSHLH-RRGGSGVFDDMFDWVHVYEKWFYLMKDGKN-----STCNRTRRASNKRFVFKMIILAAVARPRKLSNG-VWFDGKIGIWPIADVVTAARQRK 324
            VKPTL DK ++D L+F LS ++  + G  +FDD++D+VH+ EKWFYL K  ++     +  N  +   +KRF+ K++ +AAVARPR  ++  ++FD KIGIWP      A R  K
Sbjct:   84 VKPTLTDKNKMDRLLFCLSKVNLTKNGDLLFDDLYDYVHIDEKWFYLTKVKRSYYLMLNEENPEKNCKSKRFITKIMFMAAVARPRHDAHRKLYFDWKIGIWPFVYKEPAQRNSK 198          
BLAST of mRNA_D-mesarthrocarpus_Contig9862.2.1 vs. uniprot
Match: A0A4Q9LLI7_9MICR (Uncharacterized protein (Fragment) n=1 Tax=Hamiltosporidium tvaerminnensis TaxID=1176355 RepID=A0A4Q9LLI7_9MICR)

HSP 1 Score: 89.0 bits (219), Expect = 2.680e-17
Identity = 50/115 (43.48%), Postives = 70/115 (60.87%), Query Frame = 1
Query:    1 VKPTLDDKQRVDWLVFVLSHLH-RRGGSGVFDDMFDWVHVYEKWFYLMKDGKN-----STCNRTRRASNKRFVFKMIILAAVARPRKLSNGV-WFDGKIGIWPIADVVTAARQRK 324
            VKPTL DK ++D L F LS ++    G  +FDD++D+VH+ EKWFYL K  ++     +     R   +KRF+ K++ +AAVARPR  ++   +FDGKIGIWP      A R  K
Sbjct:  126 VKPTLTDKNKMDRLKFCLSKVNLANNGDFLFDDLYDYVHIDEKWFYLTKVKRSYYLMLNEEEPERNYKSKRFIMKIMFMAAVARPRYDAHRKNYFDGKIGIWPFVYQEPAQRNSK 240          
BLAST of mRNA_D-mesarthrocarpus_Contig9862.2.1 vs. uniprot
Match: A0A4Q9L327_9MICR (Uncharacterized protein n=1 Tax=Hamiltosporidium magnivora TaxID=148818 RepID=A0A4Q9L327_9MICR)

HSP 1 Score: 84.3 bits (207), Expect = 7.270e-17
Identity = 48/110 (43.64%), Postives = 62/110 (56.36%), Query Frame = 1
Query:    1 VKPTLDDKQRVDWLVFVLSHLH-RRGGSGVFDDMFDWVHVYEKWFYLMKDGKNSTCNRTRRASNKRFVFKMIILAAVARPR-KLSNGVWFDGKIGIWPIADVVTAARQRK 324
            VKPTL DK ++D L F LS ++    G  +FDD++D+VHV EKWFYL K                RF+ K++ +AAVARPR      ++FDGKIGIW       A R  K
Sbjct:   35 VKPTLTDKNKMDRLKFCLSKVNLANNGDFLFDDLYDYVHVDEKWFYLTK----------------RFITKIMFMAAVARPRYDAHRNLYFDGKIGIWQFVYKEPAQRNSK 128          
BLAST of mRNA_D-mesarthrocarpus_Contig9862.2.1 vs. uniprot
Match: A0A4Q9LSA0_9MICR (Uncharacterized protein n=2 Tax=Hamiltosporidium tvaerminnensis TaxID=1176355 RepID=A0A4Q9LSA0_9MICR)

HSP 1 Score: 80.1 bits (196), Expect = 7.920e-16
Identity = 46/115 (40.00%), Postives = 66/115 (57.39%), Query Frame = 1
Query:    1 VKPTLDDKQRVDWLVFVLSHLH-RRGGSGVFDDMFDWVHVYEKWFYLMKDGKN-----STCNRTRRASNKRFVFKMIILAAVARPR-KLSNGVWFDGKIGIWPIADVVTAARQRK 324
            VKPTL DK ++D L F L  ++    G  +FDD++D+VH+ EKWFYL K  ++     +     R   +K F+ K++ +AAVARPR      ++FDGKIGIW       A +  K
Sbjct:    8 VKPTLTDKNKMDRLKFCLYKVNLANNGDLLFDDLYDYVHIDEKWFYLTKVKRSYYLMLNEEKPERNCKSKPFITKIMFMAAVARPRYDAHRKLYFDGKIGIWLFVYQEPAQKNSK 122          
BLAST of mRNA_D-mesarthrocarpus_Contig9862.2.1 vs. uniprot
Match: A0A485LQU3_9STRA (Aste57867_24566 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LQU3_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 8.330e-16
Identity = 50/116 (43.10%), Postives = 65/116 (56.03%), Query Frame = 1
Query:    1 VKPTLDDKQRVDWLVFVLSHLHRRG--GSGVFDDMFDWVHVYEKWFYLMKDGKNSTCNRT-----RRASNKRFVFKMIILAAVARPRKLSN-GVWFDGKIGIWPIADVVTAARQRK 324
            VKP L D  +++ + F L  L R G  GS  FDDM++ VHV EKWF+  K  +            R A +KRF+ K++ LAAVARPR   +    FDGK+GIWP    + AAR  K
Sbjct:   14 VKPALMDANKIERVTFALGFL-RPGPHGSHFFDDMYNRVHVDEKWFFFTKVKRTFYVYEDEELVHRAAKSKRFITKVMFLAAVARPRYDHHLKCTFDGKLGIWPFVQRIPAARNSK 128          
BLAST of mRNA_D-mesarthrocarpus_Contig9862.2.1 vs. uniprot
Match: A0A4Q9M0E2_9MICR (Uncharacterized protein n=1 Tax=Hamiltosporidium tvaerminnensis TaxID=1176355 RepID=A0A4Q9M0E2_9MICR)

HSP 1 Score: 84.3 bits (207), Expect = 8.510e-16
Identity = 48/110 (43.64%), Postives = 62/110 (56.36%), Query Frame = 1
Query:    1 VKPTLDDKQRVDWLVFVLSHLH-RRGGSGVFDDMFDWVHVYEKWFYLMKDGKNSTCNRTRRASNKRFVFKMIILAAVARPR-KLSNGVWFDGKIGIWPIADVVTAARQRK 324
            VKPTL DK ++D L F LS ++    G  +FDD++D+VHV EKWFYL K                RF+ K++ +AAVARPR      ++FDGKIGIW       A R  K
Sbjct:  145 VKPTLTDKNKMDRLKFCLSKVNLANNGDFLFDDLYDYVHVDEKWFYLTK----------------RFITKIMFMAAVARPRYDAHRNLYFDGKIGIWQFVYKEPAQRNSK 238          
BLAST of mRNA_D-mesarthrocarpus_Contig9862.2.1 vs. uniprot
Match: A0A6A4Z7D1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z7D1_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 4.240e-15
Identity = 47/114 (41.23%), Postives = 62/114 (54.39%), Query Frame = 1
Query:    1 VKPTLDDKQRVDWLVFVLSHLHR-RGGSGVFDDMFDWVHVYEKWFYLMKDGKN-----STCNRTRRASNKRFVFKMIILAAVARPRKLSNGVWFDGKIGIWPIADVVTAARQRK 324
            VKP L      + L + +S L     G+ +FDDM D VH+ EKWFYL K  +            R   +KRF+ K++ LAA+ARPR   NG  FDGKIG+WP  + + A R  K
Sbjct:  151 VKPFLTPSNIQERLRYAISFLQPLSNGNHIFDDMHDCVHIDEKWFYLTKVKRKFYVYEDEAVAARFVKSKRFITKVMFLAAIARPRVDFNGNIFDGKIGVWPFVEKLPAKRNSK 264          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9862.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4Q9LWQ4_9MICR3.080e-1944.35Uncharacterized protein (Fragment) n=1 Tax=Hamilto... [more]
A0A4Q9LXX8_9MICR4.180e-1943.48Uncharacterized protein (Fragment) n=1 Tax=Hamilto... [more]
A0A4Q9LQK2_9MICR9.380e-1946.15Uncharacterized protein (Fragment) n=3 Tax=Hamilto... [more]
A0A4V2JXP6_9MICR7.580e-1842.61Uncharacterized protein n=2 Tax=Hamiltosporidium t... [more]
A0A4Q9LLI7_9MICR2.680e-1743.48Uncharacterized protein (Fragment) n=1 Tax=Hamilto... [more]
A0A4Q9L327_9MICR7.270e-1743.64Uncharacterized protein n=1 Tax=Hamiltosporidium m... [more]
A0A4Q9LSA0_9MICR7.920e-1640.00Uncharacterized protein n=2 Tax=Hamiltosporidium t... [more]
A0A485LQU3_9STRA8.330e-1643.10Aste57867_24566 protein n=1 Tax=Aphanomyces stella... [more]
A0A4Q9M0E2_9MICR8.510e-1643.64Uncharacterized protein n=1 Tax=Hamiltosporidium t... [more]
A0A6A4Z7D1_9STRA4.240e-1541.23Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9862contigD-mesarthrocarpus_Contig9862:352..985 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog157072.XP_008874808.1
Model size617
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.29e-11
EggNOG OGs2CMKC@1|root,2QQNW@2759|Eukaryota
Cds size303
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791137.0222735-UTR-D-mesarthrocarpus_Contig9862:351..5691680791137.0222735-UTR-D-mesarthrocarpus_Contig9862:351..569Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig9862 352..569 -
1680791137.0661645-UTR-D-mesarthrocarpus_Contig9862:889..9851680791137.0661645-UTR-D-mesarthrocarpus_Contig9862:889..985Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig9862 890..985 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791137.0367174-CDS-D-mesarthrocarpus_Contig9862:569..7891680791137.0367174-CDS-D-mesarthrocarpus_Contig9862:569..789Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9862 570..789 -
1680791137.0479608-CDS-D-mesarthrocarpus_Contig9862:806..8891680791137.0479608-CDS-D-mesarthrocarpus_Contig9862:806..889Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9862 807..889 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9862.2.1prot_D-mesarthrocarpus_Contig9862.2.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9862 570..889 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9862.2.1

>prot_D-mesarthrocarpus_Contig9862.2.1 ID=prot_D-mesarthrocarpus_Contig9862.2.1|Name=mRNA_D-mesarthrocarpus_Contig9862.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=101bp
MFDWVHVYEKWFYLMKDGKNSTCNRTRRASNKRFVFKMIILAAVARPRKL
SNGVWFDGKIGIWPIADVVTAARQRKPCQGRSCPQASHGGRGKVQEDNDV
*
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mRNA from alignment at D-mesarthrocarpus_Contig9862:352..985-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9862.2.1 ID=mRNA_D-mesarthrocarpus_Contig9862.2.1|Name=mRNA_D-mesarthrocarpus_Contig9862.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=634bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9862:352..985- (Discosporangium mesarthrocarpum MT17_79)
GTAAAGCCGACCCTCGACGACAAGCAGAGGGTGGATTGGTTGGTTTTTGT CTTGAGCCATCTTCATAGGAGGGGCGGGAGTGGGGTCTTCGACGACATGT TCGATTGGGTCCATGTGTACGAGAAGTGGTTCTATCTGATGAAGGATGGG AAAAATTCTACCTGCAACCGGACGAGGAGGTCCCCAAGCCCCCAAGGGCG TCGAACAAGCGGTTCGTATTCAAGATGATAATCCTTGCTGCTGTTGCTCG CCCTAGGAAGCTCTCCAATGGGGTATGGTTTGACGGGAAGATCGGCATCT GGCCAATTGCTGACGTGGTCACGGCAGCGCGCCAGCGAAAGCCGTGCCAG GGCAGATCCTGCCCTCAGGCCAGCCACGGTGGACGGGGGAAGGTACAAGA AGATAATGATGTATGAGGTCATCCCCGCCATCAAGGCCAAGATGCCTGGT CCGCCAGGCCACACCATGTTCGTGCAGGAGGACGGTGCCAAGCCGCACGA AGAAAGAGGTCAATGAGGCAATTCATACAGAGGCTGGGAACAGAATCATA CCAGAGACCCAGCCTTCCAACTCTCCCGACCTCAACGTGAACGATCTTGG CTTCTTCCACTCCATCCAGCAGCTGAACGAGGAC
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9862:352..985-

>mRNA_D-mesarthrocarpus_Contig9862.2.1 ID=mRNA_D-mesarthrocarpus_Contig9862.2.1|Name=mRNA_D-mesarthrocarpus_Contig9862.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=303bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9862:352..985- (Discosporangium mesarthrocarpum MT17_79)
ATGTTCGATTGGGTCCATGTGTACGAGAAGTGGTTCTATCTGATGAAGGA
TGGGAAAAATTCTACCTGCAACCGGACGAGGAGGGCGTCGAACAAGCGGT
TCGTATTCAAGATGATAATCCTTGCTGCTGTTGCTCGCCCTAGGAAGCTC
TCCAATGGGGTATGGTTTGACGGGAAGATCGGCATCTGGCCAATTGCTGA
CGTGGTCACGGCAGCGCGCCAGCGAAAGCCGTGCCAGGGCAGATCCTGCC
CTCAGGCCAGCCACGGTGGACGGGGGAAGGTACAAGAAGATAATGATGTA
TGA
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