mRNA_D-mesarthrocarpus_Contig9851.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9851.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig9851.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9851.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9851contigD-mesarthrocarpus_Contig9851:761..4653 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Model size374
Hectar predicted targeting categoryother localisation
Exons4
Cds size372
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791136.5499485-CDS-D-mesarthrocarpus_Contig9851:760..8081680791136.5499485-CDS-D-mesarthrocarpus_Contig9851:760..808Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9851 761..808 +
1680791136.5611649-CDS-D-mesarthrocarpus_Contig9851:1227..13071680791136.5611649-CDS-D-mesarthrocarpus_Contig9851:1227..1307Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9851 1228..1307 +
1680791136.5736256-CDS-D-mesarthrocarpus_Contig9851:3893..40501680791136.5736256-CDS-D-mesarthrocarpus_Contig9851:3893..4050Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9851 3894..4050 +
1680791136.5859795-CDS-D-mesarthrocarpus_Contig9851:4564..46511680791136.5859795-CDS-D-mesarthrocarpus_Contig9851:4564..4651Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9851 4565..4651 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9851.1.1prot_D-mesarthrocarpus_Contig9851.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9851 761..4651 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9851.1.1

>prot_D-mesarthrocarpus_Contig9851.1.1 ID=prot_D-mesarthrocarpus_Contig9851.1.1|Name=mRNA_D-mesarthrocarpus_Contig9851.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=124bp
LANARQLCDEKLKELQDENRELRSRVELLVKEACELKENISARAAPASCW
GATPASLSSPEDQAHLRFAGLVDSAVLRSRLERVMAELRASSAEKETLQR
QVERLMGQAGVAPCRSGTGVPFDT
back to top

mRNA from alignment at D-mesarthrocarpus_Contig9851:761..4653+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9851.1.1 ID=mRNA_D-mesarthrocarpus_Contig9851.1.1|Name=mRNA_D-mesarthrocarpus_Contig9851.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3893bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9851:761..4653+ (Discosporangium mesarthrocarpum MT17_79)
TTGGCAAACGCAAGGCAACTGTGTGATGAGAAACTCAAGGAGCTCCAGGT
GAGCGGTGCTGCAGTGAGTGTGTGCACGCCTGAAAGGGAGATACAATATG
AGCAGTTGGACAAGACCTTCACCTAAACTGGCCAGGGTGGGAATCTTTCC
TCGAGGCTCTTGGTCAACCCCAACATTTAACCCCAGACCTTACCCTAACC
TAACCCTGGCCCTAACCCTTACCCAGCTGGAGAGATCTATGGTAGCTGGC
AGGTTGTTACGAGGGATTTTTTAAAGGCAAATGTGGCAGAGCACACGGGG
CTAGTGGCCTTACCCCTCCACCCCCAACCCTGTACGTGTCCCTCTCACCC
TTGCTCAACCACCCCACTCCCCTCAACCCTTGTACCATTGTTTATTTTTT
TGCATTTTTTTCCTTTAACAAATGGTTCCCCCCCCCCCATGCGGCCAAAA
TCTATTGGCCAATGAAGGATGAGAACCGGGAGCTTCGCTCGAGGGTGGAA
TTGCTGGTGAAGGAGGCGTGCGAGCTCAAGGAGAACATTTCGGCCAGGTA
AACGCGGAAGGTGGCCACATTAGCTTTACGGGCGACTGGTGGGCTAACTG
AGGGCCATGCATGGGAAGCCAATGAGGGCAATGAGAGGTCCATGTGAGGG
GGTAGTGCGATAATGGGCAATGGATAGCCGGACCAGACCGCATCTCTGGC
GTGGAGGGGGATAGGGTGATGGAGAGCAACTGCAGTGTACGATACATGGA
AAAGAAAAAAAAATGAATGCATATTGGGTGTGATTGGATCGTTTATTTTT
TTGATTAGATATATGCCAATTCTGCTTCAGCCCCCTGACGCGATTCGCAG
ACCGTGATTTTACTTACTTAGTTGCTTAGTTAGTTAGTTAGTTAGTTAGT
TAGTTGGTTACTTACTTAGTTACTTACTTGCTTAGTCTCTCCTCGTCGAT
GATCGATTTAATCAACACACCCTGTTCCTTTGGATATGACGTCTGTGGAA
TATATTTGTGTTTGTTACCTAAGGCGCTATCTCAAGGGGGACTGAGCTCT
CTAGTCAAAGGTGCACAAGGTGTACCAGGGTCGTCCATCTTAGAACACTC
ATAGTTCCCGTACATGTCCTCGACTGTTCTTTTCGAACAATTCTGACGGT
TACTTTCTTAGAACCTTTCCAAACGTTCCCGCATTTGTTCTTGAGCATTT
TTTTGTGTGCAGTAAATGAAAACCCTCTCGTACTAAGCAGACCACTCAAA
ACAAAACCATAAACGTACTCTGTGTTAACAAACCGAGCTTTAATAAAAAA
AATTCACACTTCTTGAAGTCTATCTGTCCTCTCCGGTCATGTAACTATAA
ACACACCTTCCGAAACTATTTCCCATAAGCACACTCCTACACCAAATATC
CCATTCTCAAAGACCAGGCAGTCCCATGGTAGAAATAGTCCTATGGGCAT
GTCCATCCTAATTGCAAATCTTAGTCTAAGAAATTCATTATGGAGCGTGC
CCAGTATCTATACATTTTTTTCCAGAGGCTTGGTGAGGATACCTTCTTGC
TGTTCCTCTGACTTCCCACAATAGATGCTGATCTTCTTCAGCTTTACTAG
CTGTCGGGTGGAGTGATATTTGATGTCGATGTGCTCTGACTGGTGTGAGT
TGATGGGGTTTTTGGCCAGCTTTGGTGCGTGCCCCCTAATTTTCCTCCCT
GATGGCAACACATGGTGGCTCCCTCCTCTCCAATACGGTTTTATGCAAAC
AAACATGCCTGATTATTAATCATCGGGAGTGTTCCTTAGTATGTCCAGGG
ATTCACCTTGTCGTTCACTGACGGTGAGTTTTCTGTAACATGTGAAGGTA
GTGTCTTATGTTAGCTGAGAAGAATCCGTTTGATTCAGTACTCTAGATCA
GATGTGTGATCCATGAAGTGCTATGTGTAGACATGGGTATGTAAAGATAG
GAATATGTAAAGATAAGGATAGAGGCATGTGCACATATGGGTATGTAAAA
GTATGGTTATGTAAAGATACAGGTATGTAGAGGTATAGGTATGTAGAAAA
GGAATATGTAAAGGTACGGGTATGTAAAAAGGAATATGTAAAGATACGAG
TATGTAAAGATACAGGTAAAGACATGGGCAAGTAAAGATATGGGTATGTA
AAGATACGGGTAAAGACATGGGCATGTAAAGATACAGGTATGTAGAGATA
TGGGTATGCAGAGATACGAGTATGTAAAGATATGGCTATGTAAAGATATG
AGTATGTAAAGATACGGGTATGTAAAGATATGGGTAAATATACGGATATG
TAAAGATACGAGTATGTAAAGATATGGGTAAATATACGGATATGTAAAAA
TACGAGTATGTAAAGATACGGGTATGTAAAGATGAGTATGTAAAGATACA
GGTATGTAAAGATATGAGTATGTAAAGATACGGGTATGTAAAGATATGGG
TAAATATACGGATATGTAAAGATACGAGTATGTAAAGATATGGGTAAATA
TACGGATATGTAAAAATACGAGTATGCAAAGATACGAGTATGTAAAGATA
CGGGTATGTAAAGATGAGTATGTAAAGATACAGGTATGTAAAGATATGAG
TATGTAAAGATATGAGCATGTAAAGATATGAGTATGTAAAGATATGGGTA
TGTAGAGATATGGGTACGTAAAGATACGGGTATGTAAAGATTCGAGTAGG
TAAAGATATGGGTATGTGAAGATATGGGTATGTAAAGATATGGGTATGTA
AAGATATGAGTATGTAAAGATACGAGTATTTAAAGATATGGGTAAATATA
CGGATATGTAAAAATATGGGTATGTAAAGATATGGATAAATATACGGATG
TGTAAAGATACAAGTATGTAAAGATACGGGTATGTAAAGATATGAGTATG
TGAAGATAAGGAAAGAGATATGTAAAGATATGGGTATGTAGAAATACGGG
TATGTAGAGATGAGGGTATGTAAAATGTCCCCTCCATTTACTCTGGCGGC
AGAACCCGACTGTAAAGCCCTACCTCTGCCAAACCTCAACCCTGAGCCTT
CCCCCTGCTGCACCTCTGCTCACCCCCCGCCTTTTTGATGCTGCATCTCA
CTGTCTATCTGCTCTCATTCTTTGTGAGGGCAGGGCTGCACCTGCCTCCT
GCTGGGGGGCCACTCCTGCATCTTTGTCTTCTCCAGAGGACCAGGCTCAC
TTGCGGTTCGCAGGGCTTGTGGATTCGGCAGTGCTGCGGAGCAGGCTGGA
GAGGGTGATGGCGGAGCTGAGGGCCAGCTCGGCAGAAAAGGTGCCAAAGC
GAAACAAATCAAATCAGATCAGATCAGATCAGATGGGAACTGTTGTGTAT
TTGGCAATGTCGATGTTTCATAAGTACTAGATCAAACCTGACGAGATCAG
ATCAGACAGATTAGAATTGTTGTCTGTTTGGTGCATCCTGCGAACAATCA
TATCACCCTGGGCAGGATACTGTGTGGGGGGGCAAGGGTGTGATGCTGAT
CAAGGGTCAAGGGCCAGGGCTCCAGGGTTAGGGCTCAAGGCTGGCAATCC
TGATTGACGAAGACGTTCTCACTAGCTGTCATTGGCACTGTCAGCGCCTG
ATGCCTCCTGGAACAAAGTTGCCACCTTTGTGAGTACTGCTGTGGCCCTC
AGCACTACCTCACTTCAGTACCCCACCCCCCCCAGACACGTGCTCTTCTT
CCTCTGTACCCTGTACTGTGACCCCCTGCCCCCAACCCTTATCCTCACCC
AAAGCCCAACCCTTGCTTCTGACCCCGGGGCCTTTGTATTCATGACTTGT
GCAGGAAACTCTCCAGCGGCAGGTGGAAAGGCTCATGGGGCAAGCTGGTG
TTGCACCATGCAGGAGTGGAACAGGAGTGCCTTTTGATACCGG
back to top

Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9851:761..4653+

>mRNA_D-mesarthrocarpus_Contig9851.1.1 ID=mRNA_D-mesarthrocarpus_Contig9851.1.1|Name=mRNA_D-mesarthrocarpus_Contig9851.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=372bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9851:761..4653+ (Discosporangium mesarthrocarpum MT17_79)
TTGGCAAACGCAAGGCAACTGTGTGATGAGAAACTCAAGGAGCTCCAGGA
TGAGAACCGGGAGCTTCGCTCGAGGGTGGAATTGCTGGTGAAGGAGGCGT
GCGAGCTCAAGGAGAACATTTCGGCCAGGGCTGCACCTGCCTCCTGCTGG
GGGGCCACTCCTGCATCTTTGTCTTCTCCAGAGGACCAGGCTCACTTGCG
GTTCGCAGGGCTTGTGGATTCGGCAGTGCTGCGGAGCAGGCTGGAGAGGG
TGATGGCGGAGCTGAGGGCCAGCTCGGCAGAAAAGGAAACTCTCCAGCGG
CAGGTGGAAAGGCTCATGGGGCAAGCTGGTGTTGCACCATGCAGGAGTGG
AACAGGAGTGCCTTTTGATACC
back to top