mRNA_D-mesarthrocarpus_Contig985.6.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig985.6.1
Unique NamemRNA_D-mesarthrocarpus_Contig985.6.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig985.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig985contigD-mesarthrocarpus_Contig985:23931..25316 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Model size784
Hectar predicted targeting categoryother localisation
Exons2
Cds size780
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791136.3286085-CDS-D-mesarthrocarpus_Contig985:23930..244911680791136.3286085-CDS-D-mesarthrocarpus_Contig985:23930..24491Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig985 23931..24491 +
1680791136.3389018-CDS-D-mesarthrocarpus_Contig985:25095..253141680791136.3389018-CDS-D-mesarthrocarpus_Contig985:25095..25314Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig985 25096..25314 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig985.6.1prot_D-mesarthrocarpus_Contig985.6.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig985 23931..25314 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig985.6.1

>prot_D-mesarthrocarpus_Contig985.6.1 ID=prot_D-mesarthrocarpus_Contig985.6.1|Name=mRNA_D-mesarthrocarpus_Contig985.6.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=260bp
GGGTSHPPEGERHSPAFEGVYEGPGKQQQQDGRREAWDHRGTSQEVPVAV
GGGRSTTGAQAQQGPGEGIKESGSIYNSLASMGSFRKSAFALRWDDESVQ
PPGGRSESGLGGTGSSSASSGSMGRGRVSGILRLGGAPSPHGAVARKRGG
LQRKPPSEKQQRYEPFNRAKTDLNLMSVEQLVAKVQELERNSASWRLKYA
ECERKLRNAYQALERAGLKPKEDATEAWIRPQVAGGGQHPAQSNSATTPP
DFGTGVNHGG
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mRNA from alignment at D-mesarthrocarpus_Contig985:23931..25316+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig985.6.1 ID=mRNA_D-mesarthrocarpus_Contig985.6.1|Name=mRNA_D-mesarthrocarpus_Contig985.6.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1386bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig985:23931..25316+ (Discosporangium mesarthrocarpum MT17_79)
GGTGGGGGCACATCACACCCCCCTGAGGGTGAGAGGCATAGCCCTGCGTT
TGAAGGGGTGTATGAGGGCCCTGGCAAACAGCAACAGCAGGATGGGCGGC
GTGAAGCATGGGACCACCGTGGCACCTCCCAGGAAGTGCCGGTGGCGGTA
GGCGGTGGAAGGTCGACCACTGGTGCTCAGGCACAACAGGGGCCAGGGGA
GGGCATCAAGGAGAGTGGGAGCATCTACAACAGCCTGGCAAGCATGGGGA
GCTTTCGGAAGAGTGCCTTTGCCCTGAGGTGGGATGATGAGAGCGTACAG
CCGCCTGGAGGCAGGTCGGAGTCAGGCCTGGGTGGCACCGGATCTTCTTC
CGCCTCCTCAGGGTCGATGGGTCGGGGCAGGGTGTCGGGTATTTTGCGCC
TAGGAGGAGCCCCCTCGCCTCACGGTGCAGTGGCCAGGAAGCGGGGCGGG
CTGCAGCGCAAGCCTCCGAGTGAGAAGCAGCAGAGGTACGAGCCTTTCAA
CAGGGCAAAGACGGACCTCAACCTCATGTCTGTGGAGCAGCTGGTGGCTA
AAGTGCAGGAGGTGAGAGTTCTGTATGCATGGTTCTCTTTCTTTTTTTGG
ATGGGAAGGGGTGGGGACAGGGGAAGGGGCAGGGGTGGGGGGGGGGGACG
GTCCGGAAAGAAGGAAGGACACTGGGTCCCTGATTTTTTCTTCTTCCGGA
GATGTGCTCCCTTCTCTGGGTCAGAAATTTTCTTGGGGTGCGTGCCTCTG
GAGGCATGAGATTTGCATCTCCCTGCGTACGATCCGGCCATCTGTCTGCC
TTTTTTCTTTTTTTTTCTATTTTTCTTCACTTTTTTTTGTCAGTGAGGTA
CTACATGTGGCCCCCTGGCACTGATGGTGTAGTGAAGTTTCACTTGCTGC
TCTGTAGTGTCTGGTCCCCCCCTGACCACATGCCACAGGGGTGTGTGGGA
GCCAGAATTTTAAAATTCGAACCTAACCCCCAATTTGACCATGGCATTTG
CCAAGAACCTGTGCCCATAATGGCACTGAACCCAACTCATGTCAAGGACT
GAGAGATATATTGCCCACGGGCAGAAGCAGCCCTGCTTCCTGTGATTACC
TCTTTTGGTACCCCCACAACCTTCCCCCCCCCCACCTCCCTTGACGCTTG
GGGCTTCCACAACAGCTCGAGAGGAATTCTGCAAGTTGGAGACTCAAGTA
CGCTGAGTGTGAGAGGAAGCTGAGGAACGCCTACCAGGCCTTGGAAAGGG
CAGGGCTCAAGCCCAAGGAGGATGCCACTGAGGCCTGGATAAGGCCACAG
GTGGCGGGGGGAGGGCAACATCCTGCACAGAGTAATAGTGCAACAACCCC
CCCTGATTTTGGGACAGGGGTCAACCATGGGGGAGG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig985:23931..25316+

>mRNA_D-mesarthrocarpus_Contig985.6.1 ID=mRNA_D-mesarthrocarpus_Contig985.6.1|Name=mRNA_D-mesarthrocarpus_Contig985.6.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=780bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig985:23931..25316+ (Discosporangium mesarthrocarpum MT17_79)
GGTGGGGGCACATCACACCCCCCTGAGGGTGAGAGGCATAGCCCTGCGTT
TGAAGGGGTGTATGAGGGCCCTGGCAAACAGCAACAGCAGGATGGGCGGC
GTGAAGCATGGGACCACCGTGGCACCTCCCAGGAAGTGCCGGTGGCGGTA
GGCGGTGGAAGGTCGACCACTGGTGCTCAGGCACAACAGGGGCCAGGGGA
GGGCATCAAGGAGAGTGGGAGCATCTACAACAGCCTGGCAAGCATGGGGA
GCTTTCGGAAGAGTGCCTTTGCCCTGAGGTGGGATGATGAGAGCGTACAG
CCGCCTGGAGGCAGGTCGGAGTCAGGCCTGGGTGGCACCGGATCTTCTTC
CGCCTCCTCAGGGTCGATGGGTCGGGGCAGGGTGTCGGGTATTTTGCGCC
TAGGAGGAGCCCCCTCGCCTCACGGTGCAGTGGCCAGGAAGCGGGGCGGG
CTGCAGCGCAAGCCTCCGAGTGAGAAGCAGCAGAGGTACGAGCCTTTCAA
CAGGGCAAAGACGGACCTCAACCTCATGTCTGTGGAGCAGCTGGTGGCTA
AAGTGCAGGAGCTCGAGAGGAATTCTGCAAGTTGGAGACTCAAGTACGCT
GAGTGTGAGAGGAAGCTGAGGAACGCCTACCAGGCCTTGGAAAGGGCAGG
GCTCAAGCCCAAGGAGGATGCCACTGAGGCCTGGATAAGGCCACAGGTGG
CGGGGGGAGGGCAACATCCTGCACAGAGTAATAGTGCAACAACCCCCCCT
GATTTTGGGACAGGGGTCAACCATGGGGGA
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