mRNA_D-mesarthrocarpus_Contig985.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig985.2.1
Unique NamemRNA_D-mesarthrocarpus_Contig985.2.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig985.2.1 vs. uniprot
Match: D7FU30_ECTSI (zf-met2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU30_ECTSI)

HSP 1 Score: 117 bits (294), Expect = 4.480e-29
Identity = 59/77 (76.62%), Postives = 64/77 (83.12%), Query Frame = 1 
Query:  235 MGGGNGQKSATARARNEKKRAQGHKGSQLAVNAAACNIVCQVCRQSFMNVSNDAMLMTHATNKHAGKKTPKDCFPGR 465
            MGGGN QKSATARARNE K+A+  KGSQLAVN AA +IVCQVCRQSFM+VSNDAML  H T KH  KKTP +CFPGR
Sbjct:    1 MGGGNAQKSATARARNEAKKAKAGKGSQLAVNKAAQSIVCQVCRQSFMSVSNDAMLADHVTAKHNKKKTPAECFPGR 77
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BLAST of mRNA_D-mesarthrocarpus_Contig985.2.1 vs. uniprot
Match: A0A836C7H0_9STRA (At2g23090 like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7H0_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 5.960e-19
Identity = 47/77 (61.04%), Postives = 56/77 (72.73%), Query Frame = 1 
Query:  235 MGGGNGQKSATARARNEKKRAQGHKGSQLAVNAAACNIVCQVCRQSFMNVSNDAMLMTHATNKHAGKKTPKDCFPGR 465
            MGGGNGQKS  AR +  K+ A+  KGSQLA+N+AACNIVCQVCRQ+FM V+N+  L  HA NKH  K  P  CFP +
Sbjct:    1 MGGGNGQKSKAAREKAAKRDAK-PKGSQLAMNSAACNIVCQVCRQTFMMVANETTLREHALNKHP-KSAPSACFPDK 75
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BLAST of mRNA_D-mesarthrocarpus_Contig985.2.1 vs. uniprot
Match: A0A059LL58_9CHLO (zf-met2 domain-containing protein n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LL58_9CHLO)

HSP 1 Score: 79.3 bits (194), Expect = 6.820e-15
Identity = 42/76 (55.26%), Postives = 51/76 (67.11%), Query Frame = 1 
Query:  235 MGGGNGQKSATARARNEKKRAQGHKGSQLAVNAAACNIVCQVCRQSFMNVSNDAMLMTHATNKHAGKKTPKDCFPG 462
            MGGGN QK+A ARA+  +K A+G  GSQL  NAAA NIVCQ+CR +F+  S    L  HA NKH   K  ++CFPG
Sbjct:    1 MGGGNAQKTAMARAKKLEKAAKGSAGSQLKSNAAANNIVCQICRSTFICTSTVVKLKEHADNKHPKNKF-EECFPG 75
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BLAST of mRNA_D-mesarthrocarpus_Contig985.2.1 vs. uniprot
Match: A0A2V0PNL0_9CHLO (zf-met2 domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PNL0_9CHLO)

HSP 1 Score: 73.9 bits (180), Expect = 6.310e-13
Identity = 41/76 (53.95%), Postives = 49/76 (64.47%), Query Frame = 1 
Query:  235 MGGGNGQKSATARARN-EKKRAQGHKGSQLAVNAAACNIVCQVCRQSFMNVSNDAMLMTHATNKHAGKKTPKDCFP 459
            MGGGNGQKSATAR R  EK +A  +KGSQL  NAAA ++ C VC Q F+  + +A +  HA NKH  K     CFP
Sbjct:    1 MGGGNGQKSATARLRKMEKLQANANKGSQLKANAAALSLKCHVCLQQFICTTTEAKMREHAENKHP-KTDVYQCFP 75
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BLAST of mRNA_D-mesarthrocarpus_Contig985.2.1 vs. uniprot
Match: A4RZ85_OSTLU (Uncharacterized protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4RZ85_OSTLU)

HSP 1 Score: 73.6 bits (179), Expect = 7.990e-13
Identity = 41/76 (53.95%), Postives = 48/76 (63.16%), Query Frame = 1 
Query:  235 MGGGNGQKSATARARNEKKRAQGHKGSQLAVNAAACNIVCQVCRQSFMNVSNDAMLMTHATNKHAGKKTPKDCFPG 462
            MGGGN QKSATAR +  +K  +   GSQLA NA A + VCQVCR SFM       L  H+ NKH  K+T + CFPG
Sbjct:    1 MGGGNAQKSATARKKAMEKAQKAGAGSQLAANAKAMSTVCQVCRASFMCTLAPIKLKEHSDNKHP-KQTFEHCFPG 75
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BLAST of mRNA_D-mesarthrocarpus_Contig985.2.1 vs. uniprot
Match: G2REW1_THETT (zf-met2 domain-containing protein n=2 Tax=Thermothielavioides terrestris TaxID=2587410 RepID=G2REW1_THETT)

HSP 1 Score: 72.4 bits (176), Expect = 2.120e-12
Identity = 40/75 (53.33%), Postives = 47/75 (62.67%), Query Frame = 1 
Query:  235 MGGGNGQKSATARARNEKKRAQGHKGSQLAVNAAACNIVCQVCRQSFMNVSNDAMLMTHATNKHAGKKTPKDCFP 459
            MGGGNG K+A  RARN +K A    GSQL  NAAA NI+C  C+QSF++ S +  L  HA NKH    T   CFP
Sbjct:    1 MGGGNGAKAAQKRARNNQKIAT-KPGSQLKSNAAAMNIICAQCKQSFLSTSREPQLTLHAVNKH--NATLPQCFP 72
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BLAST of mRNA_D-mesarthrocarpus_Contig985.2.1 vs. uniprot
Match: E1ZJ16_CHLVA (zf-met2 domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZJ16_CHLVA)

HSP 1 Score: 70.9 bits (172), Expect = 7.500e-12
Identity = 43/80 (53.75%), Postives = 53/80 (66.25%), Query Frame = 1 
Query:  235 MGGGNGQKSATARARN---EKKRAQGHKGSQLAVNAAACNIVCQVCRQSFMNVSNDAMLMTHATNKHAGKKTPKDCFPGR 465
            MGGGN QKSATAR R    +KK A G   SQLA NA A +IVCQ+CRQSFM     A L  H+ ++H  +K  ++CFPG+
Sbjct:    1 MGGGNAQKSATARQRKAEKDKKLAGGK--SQLADNAKALSIVCQICRQSFMCNMTPAKLKEHSDSRHPKQKF-EECFPGQ 77
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BLAST of mRNA_D-mesarthrocarpus_Contig985.2.1 vs. uniprot
Match: A0A175WAH6_9PEZI (zf-met2 domain-containing protein n=1 Tax=Madurella mycetomatis TaxID=100816 RepID=A0A175WAH6_9PEZI)

HSP 1 Score: 70.5 bits (171), Expect = 1.060e-11
Identity = 40/75 (53.33%), Postives = 47/75 (62.67%), Query Frame = 1 
Query:  235 MGGGNGQKSATARARNEKKRAQGHKGSQLAVNAAACNIVCQVCRQSFMNVSNDAMLMTHATNKHAGKKTPKDCFP 459
            MGGGNG K+A  RARN++K A   K SQL  N AA NIVC VC+Q+F++ S    L  HA NKH    T   CFP
Sbjct:    1 MGGGNGAKAAQKRARNKEKAAPVAK-SQLKSNTAAMNIVCNVCKQTFLSTSRAPQLTQHAENKH--NSTLTQCFP 72
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BLAST of mRNA_D-mesarthrocarpus_Contig985.2.1 vs. uniprot
Match: A0A090CC53_PODAN (Uncharacterized protein n=2 Tax=Podospora TaxID=5144 RepID=A0A090CC53_PODAN)

HSP 1 Score: 69.3 bits (168), Expect = 2.640e-11
Identity = 37/76 (48.68%), Postives = 48/76 (63.16%), Query Frame = 1 
Query:  235 MGGGNGQKSATARARNEKKRAQGHKGSQLAVNAAACNIVCQVCRQSFMNVSNDAMLMTHATN-KHAGKKTPKDCFP 459
            MGGGNG K+A  RARN K  A     SQL  N  A NI+C +C+Q+F++ S    L  H+++ KHAGK T + CFP
Sbjct:    1 MGGGNGAKAAQKRARNAKDAAP-KAASQLKSNEKAMNIICNICKQTFLSTSRKPQLEQHSSSGKHAGKHTFEQCFP 75
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BLAST of mRNA_D-mesarthrocarpus_Contig985.2.1 vs. uniprot
Match: A0A0A1TFM8_9HYPO (Putative Transmembrane protein n=1 Tax=Torrubiella hemipterigena TaxID=1531966 RepID=A0A0A1TFM8_9HYPO)

HSP 1 Score: 68.2 bits (165), Expect = 5.960e-11
Identity = 36/73 (49.32%), Postives = 45/73 (61.64%), Query Frame = 1 
Query:  244 GNGQKSATARARNEKKRAQGHKGSQLAVNAAACNIVCQVCRQSFMNVSNDAMLMTHATNKHAGKKTPKDCFPG 462
            GNG K+   R RN K ++ G K SQL VN AAC+I+C VCR +F+  +    L+ HA NKH   K   DCFPG
Sbjct:    2 GNGAKAQQKRERNAKDKSGGAK-SQLKVNQAACDIICTVCRSTFLKTTKPPQLLEHAQNKH--NKGMADCFPG 71
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig985.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FU30_ECTSI4.480e-2976.62zf-met2 domain-containing protein n=2 Tax=Ectocarp... [more]
A0A836C7H0_9STRA5.960e-1961.04At2g23090 like protein n=1 Tax=Tribonema minus Tax... [more]
A0A059LL58_9CHLO6.820e-1555.26zf-met2 domain-containing protein n=1 Tax=Helicosp... [more]
A0A2V0PNL0_9CHLO6.310e-1353.95zf-met2 domain-containing protein n=1 Tax=Raphidoc... [more]
A4RZ85_OSTLU7.990e-1353.95Uncharacterized protein n=1 Tax=Ostreococcus lucim... [more]
G2REW1_THETT2.120e-1253.33zf-met2 domain-containing protein n=2 Tax=Thermoth... [more]
E1ZJ16_CHLVA7.500e-1253.75zf-met2 domain-containing protein n=1 Tax=Chlorell... [more]
A0A175WAH6_9PEZI1.060e-1153.33zf-met2 domain-containing protein n=1 Tax=Madurell... [more]
A0A090CC53_PODAN2.640e-1148.68Uncharacterized protein n=2 Tax=Podospora TaxID=51... [more]
A0A0A1TFM8_9HYPO5.960e-1149.32Putative Transmembrane protein n=1 Tax=Torrubiella... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig985contigD-mesarthrocarpus_Contig985:13351..14962 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FU30
PFAMs4F5,zf-met2
Model size1215
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue5.21e-32
EggNOG OGs2DZSG@1|root,2SCN8@2759|Eukaryota
Ec32 ortholog descriptionAt2g23090 like
Ec32 orthologEc-27_001220.1
DescriptionZinc-binding
Cds size237
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791136.377317-UTR-D-mesarthrocarpus_Contig985:13350..135841680791136.377317-UTR-D-mesarthrocarpus_Contig985:13350..13584Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig985 13351..13584 +
1680791136.4306662-UTR-D-mesarthrocarpus_Contig985:14218..149621680791136.4306662-UTR-D-mesarthrocarpus_Contig985:14218..14962Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig985 14219..14962 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791136.3957486-CDS-D-mesarthrocarpus_Contig985:13584..137071680791136.3957486-CDS-D-mesarthrocarpus_Contig985:13584..13707Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig985 13585..13707 +
1680791136.4132328-CDS-D-mesarthrocarpus_Contig985:14104..142181680791136.4132328-CDS-D-mesarthrocarpus_Contig985:14104..14218Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig985 14105..14218 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig985.2.1prot_D-mesarthrocarpus_Contig985.2.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig985 13585..14218 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig985.2.1

>prot_D-mesarthrocarpus_Contig985.2.1 ID=prot_D-mesarthrocarpus_Contig985.2.1|Name=mRNA_D-mesarthrocarpus_Contig985.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=79bp
MGGGNGQKSATARARNEKKRAQGHKGSQLAVNAAACNIVCQVCRQSFMNV
SNDAMLMTHATNKHAGKKTPKDCFPGRF*
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mRNA from alignment at D-mesarthrocarpus_Contig985:13351..14962+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig985.2.1 ID=mRNA_D-mesarthrocarpus_Contig985.2.1|Name=mRNA_D-mesarthrocarpus_Contig985.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1612bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig985:13351..14962+ (Discosporangium mesarthrocarpum MT17_79)
TGCACCTCGTTTGTTGTGGATTGGCGTTTTGTTTTCACAGATGTGGGGTT
TTACACCTCTCCATTGGCGGGGTTCCCTGTAATCTGTCGCGAGGGAGAGC
GCATACGAAGACGCATGTAGTATGAGCTTTTTCATTAAGCATTGGCGATT
GGTGTCTCTGGTACGTTAGAGGAATCGCTGTCACCAACTCTGCTGTATTA
TTGCTCTTCTGTCGTTGTGATCGATGTTTAGACCATGGGTGGTGGCAACG
GGCAAAAATCGGCCACCGCACGGGCACGGAACGAGAAGAAGAGGGCCCAG
GGGCATAAGGGCTCGCAACTCGCTGTGAACGCGGCCGCCTGCAACATCGT
CTGCCAGGTTTGTATTTGTTTTCTTGTTGACCAATTTCCGCTAGGTTGAT
CGTTTGGGCCTTGGGAGTCAGTTGGAGACCTTGTCTGAAAAGCACCCACG
GAGTCATGAAATCAATCCTGTGGCTATTTTGTACCGCGTTTGGTGCTCTG
TCAGTATTTATATTGAGTGGTTGGTGATGACTGCTGTTAACATGCCTGTG
CACGTCTGCGGGTGATAAAGCGAATGCATGGTTGGTACCCATGTGATACA
TAGCTCGAATCGTGGAACGGCGCTGCGGGGTGCATGCCGTTCTGTCTTCT
CCACTCTACACGAGTTGCATTCCTTTGTCAGCTTTGTCAAATGTATAACA
TTCATCGTACCATTTCGCACGATGGAACCCACGCTTCCAAAACTTGCCGC
CCAGGTCTGCCGGCAGAGCTTCATGAATGTATCAAACGACGCCATGCTCA
TGACACACGCGACAAACAAGCATGCTGGAAAGAAAACGCCGAAGGACTGC
TTTCCTGGGAGGTTCTGATCGTCTATATGACCAGTCCATAGCCTGCAATA
TTCACATGTCATGGCTGTCGATACATGGCAAGAGTTGCGCAGTCCTCCTC
TTTTACAATTCGAGACCTGAGGACTATCTGCCCAGACCTAGCGGAGGAGT
ATTCCTTGTGGCCAGCGAGGCATCGACGCATGCCGCACTCCCTTGTTGGC
ATGGTCGGGTGCCAGGGTGGGGCGTGCTTGCCTCACGTTTTATCTGAACA
CCCGATTTTGTTTGATCAGCCGAGGGTGACCTGCCCCGCCACAATAGTCA
ATAGTCCAGACGCAGCATCGGGATACACAGGGATGGAAGTCAACAGTCCA
AGTGGGGGTTGTCCATATTAAATCAAAGAGTCGAGTGAGAGTAACATTAA
ATACCATACAGTAATATAATAAGTGAGCCCGTTTTGTGTATATAACAGTT
TTAAAACTAGAGACTGCTGTGGAGCAGCCTGCAGGGGGAGGCAATACACG
TCTCGGTGACCAAAGTGTCTCAAAGCAGGCAAGTGGAGCTCTTGTCAGGT
TTGATGATGTCTTCGAGACCACTGGGTTTTGAACAGCTTGCCGTAGAGGG
GAGTGAAGAAAAGAGGGGGTGGAGCTCCTCCTAACGGATATGTCCAAGCA
GTTAATTTTTCTTGAAGTTTTGTGTGACGAAAAAACTGCCTTCCAGAGCA
ACGAAAGAGGCACGTGACCAGTTGTTTGTACTTCGCGCCAGTCATCCACT
CTGTGTACACAC
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig985:13351..14962+

>mRNA_D-mesarthrocarpus_Contig985.2.1 ID=mRNA_D-mesarthrocarpus_Contig985.2.1|Name=mRNA_D-mesarthrocarpus_Contig985.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=237bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig985:13351..14962+ (Discosporangium mesarthrocarpum MT17_79)
ATGGGTGGTGGCAACGGGCAAAAATCGGCCACCGCACGGGCACGGAACGA
GAAGAAGAGGGCCCAGGGGCATAAGGGCTCGCAACTCGCTGTGAACGCGG
CCGCCTGCAACATCGTCTGCCAGGTCTGCCGGCAGAGCTTCATGAATGTA
TCAAACGACGCCATGCTCATGACACACGCGACAAACAAGCATGCTGGAAA
GAAAACGCCGAAGGACTGCTTTCCTGGGAGGTTCTGA
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