mRNA_D-mesarthrocarpus_Contig9848.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_D-mesarthrocarpus_Contig9848.2.1
Unique Name	mRNA_D-mesarthrocarpus_Contig9848.2.1
Type	mRNA
Organism	Discosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)

Homology

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BLAST of mRNA_D-mesarthrocarpus_Contig9848.2.1 vs. uniprot
Match: D7G826_ECTSI (A_deaminase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G826_ECTSI)

HSP 1 Score: 59.3 bits (142), Expect = 1.030e-8
Identity = 26/44 (59.09%), Postives = 37/44 (84.09%), Query Frame = 1

Query:    7 YPFSVNTDDPGVFETNLSSEYAHLAKAHGLDKASMAELACRALE 138
            YPF VNTDD GVF+T+L++E+AHLA ++ LD+  +A LACRA++
Sbjct:  319 YPFGVNTDDSGVFDTDLATEFAHLATSNDLDEEGIACLACRAVQ 362

The following BLAST results are available for this feature:

BLAST of mRNA_D-mesarthrocarpus_Contig9848.2.1 vs. uniprot

BLAST of mRNA_D-mesarthrocarpus_Contig9848.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1

ZOOM

x 1

POSITION

0


Match Name	E-value	Identity	Description
D7G826_ECTSI	1.030e-8	59.09	A_deaminase domain-containing protein n=2 Tax=Ecto...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
D-mesarthrocarpus_Contig9848	contig	D-mesarthrocarpus_Contig9848:4171..4365 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	0
Seed ortholog	2880.D7G826
Preferred name	ADAL
PFAMs	A_deaminase
Model size	195
Max annot lvl	2759\|Eukaryota
KEGG rclass	RC00477
KEGG ko	ko:K01488,ko:K12191
KEGG Reaction	R01560,R02556
KEGG Pathway	ko00230,ko01100,ko04144,ko04217,ko05340,map00230,map01100,map04144,map04217,map05340
KEGG Module	M00412
Hectar predicted targeting category	other localisation
GOs	GO:0003674,GO:0003824,GO:0004000,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006152,GO:0006154,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009164,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017144,GO:0018130,GO:0019239,GO:0019438,GO:0019439,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042278,GO:0042451,GO:0042454,GO:0042455,GO:0042737,GO:0043094,GO:0043101,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046085,GO:0046102,GO:0046103,GO:0046128,GO:0046129,GO:0046130,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0072523,GO:1901135,GO:1901136,GO:1901137,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901657,GO:1901658,GO:1901659
Exons	1
Evalue	1.69e-09
EggNOG OGs	COG1816@1\|root,KOG1097@2759\|Eukaryota
EC	3.5.4.4
Description	hypoxanthine salvage
Cds size	195
COG category	F
BRITE	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680791136.1249583-CDS-D-mesarthrocarpus_Contig9848:4170..4365	1680791136.1249583-CDS-D-mesarthrocarpus_Contig9848:4170..4365	Discosporangium mesarthrocarpum MT17_79	CDS	D-mesarthrocarpus_Contig9848 4171..4365 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_D-mesarthrocarpus_Contig9848.2.1	prot_D-mesarthrocarpus_Contig9848.2.1	Discosporangium mesarthrocarpum MT17_79	polypeptide	D-mesarthrocarpus_Contig9848 4171..4365 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at D-mesarthrocarpus_Contig9848:4171..4365-
coding sequence from alignment at D-mesarthrocarpus_Contig9848:4171..4365-

protein sequence of mRNA_D-mesarthrocarpus_Contig9848.2.1

>prot_D-mesarthrocarpus_Contig9848.2.1 ID=prot_D-mesarthrocarpus_Contig9848.2.1|Name=mRNA_D-mesarthrocarpus_Contig9848.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=65bp
SRYPFSVNTDDPGVFETNLSSEYAHLAKAHGLDKASMAELACRALEVSWN
AASAGLPLPVSDDG*

mRNA from alignment at D-mesarthrocarpus_Contig9848:4171..4365-

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_D-mesarthrocarpus_Contig9848.2.1 ID=mRNA_D-mesarthrocarpus_Contig9848.2.1|Name=mRNA_D-mesarthrocarpus_Contig9848.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=195bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9848:4171..4365- (Discosporangium mesarthrocarpum MT17_79)
AGCAGGTACCCGTTTTCTGTGAACACGGACGACCCGGGTGTCTTTGAGAC
TAATCTCTCCTCGGAGTACGCGCACCTTGCAAAGGCGCACGGCCTGGACA
AGGCAAGCATGGCAGAACTTGCATGCCGGGCCCTGGAGGTGAGTTGGAAT
GCCGCTTCTGCTGGCCTGCCCCTGCCGGTGTCCGATGATGGTTGA

Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9848:4171..4365-

>mRNA_D-mesarthrocarpus_Contig9848.2.1 ID=mRNA_D-mesarthrocarpus_Contig9848.2.1|Name=mRNA_D-mesarthrocarpus_Contig9848.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=195bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9848:4171..4365- (Discosporangium mesarthrocarpum MT17_79)
AGCAGGTACCCGTTTTCTGTGAACACGGACGACCCGGGTGTCTTTGAGAC
TAATCTCTCCTCGGAGTACGCGCACCTTGCAAAGGCGCACGGCCTGGACA
AGGCAAGCATGGCAGAACTTGCATGCCGGGCCCTGGAGGTGAGTTGGAAT
GCCGCTTCTGCTGGCCTGCCCCTGCCGGTGTCCGATGATGGTTGA