mRNA_D-mesarthrocarpus_Contig9843.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9843.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig9843.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9843.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9843contigD-mesarthrocarpus_Contig9843:84..2722 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Model size526
Hectar predicted targeting categoryother localisation
Exons3
Cds size525
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791135.846766-CDS-D-mesarthrocarpus_Contig9843:84..3901680791135.846766-CDS-D-mesarthrocarpus_Contig9843:84..390Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9843 85..390 -
1680791135.85871-CDS-D-mesarthrocarpus_Contig9843:1719..18551680791135.85871-CDS-D-mesarthrocarpus_Contig9843:1719..1855Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9843 1720..1855 -
1680791135.8698306-CDS-D-mesarthrocarpus_Contig9843:2639..27221680791135.8698306-CDS-D-mesarthrocarpus_Contig9843:2639..2722Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9843 2640..2722 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9843.1.1prot_D-mesarthrocarpus_Contig9843.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9843 85..2722 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9843.1.1

>prot_D-mesarthrocarpus_Contig9843.1.1 ID=prot_D-mesarthrocarpus_Contig9843.1.1|Name=mRNA_D-mesarthrocarpus_Contig9843.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=175bp
IDRAESKEKDQRRALDGLRLSMGENARRAERELRGLRAEVLTARNEATAL
RARLVCVQGRRAAEKDAARVRVQELENFVDIECRASTRVSPRATKGPQRL
SLAAQSPTNMAQSPFKDRRQGGTATRPRGAGREAAGAGSDPPSGGSLSKR
GQGQPPSLLFQARQRLSARGHGAGA
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mRNA from alignment at D-mesarthrocarpus_Contig9843:84..2722-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9843.1.1 ID=mRNA_D-mesarthrocarpus_Contig9843.1.1|Name=mRNA_D-mesarthrocarpus_Contig9843.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2639bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9843:84..2722- (Discosporangium mesarthrocarpum MT17_79)
ATCGATAGGGCCGAGTCCAAGGAGAAGGACCAGAGGAGGGCCCTCGACGG
ACTTCGCTTGTCCATGGGGGAGAATGCCAGGAGGTGGGCATGTATGGGTG
GGTGCGGAATCGAATCATAGGGGGATTGTGTGTGTGTGTATGCCCATGTG
TGTGTATGTGTGTGTGTGTGTGTGCGTGTGTGTGCGTGTGTGTGATGAAA
AAAAAAAGAGTTGTTCTTTCTCTCGAAACCGCCATCCTGTGAAACGGCTG
TGCGGGAAACGTGCTTGAAAAAACCTGGCGATTTCTTTTTTTTGGTGGCT
GGGAATTTCTGCGCGGTGGTGTGGTAGAACCTCTGAAACTGTCGGCTGTG
TCCCGAGAGCTGTGAAACATATTACTGTCCCCAACCCTAGCTCCAACCCT
ATCCCTGTCCCTAACCCCTAACCCCCTAACCCTAACCCTAACCCTTACCC
TAACCCTAACCCTAACCCTCACATCCGGACATTCGTCACTGCCCAGAGTC
CTGTGGCCATGAGCAGGAAAAAACGACACCGAAAAACGAAAAAAATGTGA
AAAATATGGACGAAGGCCACAACGTTATGAAATAAAACAGGGAAAGCAGA
AGCAAACAATAGAAACTTCCTTCCAGAGTAGTAGTAAAAAAAAAATAGTA
GTAGTAGTAGTAATAATAATAATAGCAATAATGATAATAATAATAGTAAT
ACTAACAACAATAATAATAACAATAATAACAATAATAACAACAATAACAA
TAATAATAATAATAACAATAATAATAATAATAACAATAATAATAATAATA
ATAAAAATAAAATAATAATAACTGGTCGCTGCTGGCATGGGGCGGGCGGG
CTGTGAAAAAAAAAAAGGGCAGAGCGGGAGCTCCGGGGGCTCCGTGCGGA
GGTGTTGACAGCGAGGAACGAGGCCACAGCACTGCGGGCCCGTCTCGTCT
GCGTCCAGGGGAGGAGAGCGGCCGAGAAGGACGCTGCCAGGGTCAGGGTG
CAGGTCAGGGTTAGTAGGGTAGAGTTCGTGGGGCTAGGGTTAGGGTTTGA
GGGGGGGGGGGGGGGGGCTTCAGGGAGTGTGGTCACCGGTTGTAAAAAAC
CACCTTTCCCTTCCCAGAGAGCAGAAGTGGCATTTGTGCACCTAACCGCC
AATGTTTTTTTTGGGGGGGGGAGGGGTTAGACCACCATAGGTGGCATGGG
GTGAACACAGGAAGGGAACAGGTAGCTGGCTGGCTGTGAAGGGCCCCCGT
CATCTGTCTGCCCAAGAGCTCCTGGAGCTGTCTCCCAAGATGCTGTTGCT
GACTCTGAACCCACACAGTAACATCTATGGCCGCCTTTTGCTAACAGGCA
GGGGCGCAGGGCAAGGGCGGGGGTTGGGGCAGGGGTTGGGGCAGGGGTAG
GGGAAGGGGAAGGGGAAGGGGAAGGGGAAGGGGTCGAGAAAGGAATATGG
GTGCAGAGGCACAAGTAGGGTGTGGGTGTTCTTGAGCAAGGGGGTGCCCA
GTGCGCATTGTCATCTCTCCCCCCACCACCTGCCCATCCGCCTGCCCGCC
CACCCACCTGCCCCCCCTCCCCTATTCCCTATCACTTTAGAATGAAAGCA
GGAGTTGTGGGGGCAGGGGGGCATGGGTGAGATGCGCAGAGGGAAGGGGT
GACTGACCCTATCACTACCCCAAACCCTAACCCTAACCCTAACCCCATCA
CTGTTGCTGTACCCCAAGGCAAGAACCAGTTGGCACCATTTAGGATTGTT
TGTCTTGCCAAGCATGCATTGAAGTACTTGTTTTTTTTTTTATGGAGCGT
TTCATGGTCTTTTTTGTGAAAAAGCTCTTGGGGCAGAAAAAAGAGAGAAT
GAAGAAGGAGAAGAAGCAGAAGGGGGAGGAGAAGAAGGAGAGGGAGAGGG
AGAGGAGGGAGAGGAAAAGGAAAAAGAGAAGGAAAAGGAAAGGGAAGAGG
CAGAGGAAAGGAAAAAGGAAGCGGACAAGAAAAAGAAAAAGAAAGGAAAA
AGGAGATGGAAGAGGGAGAGGAAAGGAAAAGGAAGGGCAAGAGAAACAAG
AAAAGGAAGAAAGGAAAAAAAAAGAAAAGGATAAGGCGAAACGAAAGGAG
AAACTGGGTCCCCCACCCCACCACAGTGAGGGGGCGAGTGATAGCCCTAA
CCCTAACCCAGGTGGCGGTTACAGCCCGAAGGAAAGCCTTTGCTTACAGC
ATTATACCCTTCAGTGTACCGCAGGCCTCCCGATGTGCTGAGACCCAGAT
CCAACCCACCCCTAGCCCAAACACGTGCCCAGACTGATCCCTAACCCTAA
CCCAAACCCTGACCCTAACCCTGAAATGAAAGGAGCTCGAGAACTTCGTG
GACATCGAGTGCAGGGCATCGACGAGGGTCTCCCCCAGGGCAACAAAGGG
CCCACAGAGACTCTCTCTGGCGGCCCAGAGCCCCACAAATATGGCCCAGA
GCCCTTTCAAGGACAGAAGACAGGGTGGCACAGCAACAAGGCCACGAGGG
GCAGGGAGAGAGGCTGCAGGGGCGGGCTCAGACCCCCCATCGGGGGGGTC
ATTGAGTAAGAGGGGTCAGGGCCAGCCGCCCAGCCTGCTGTTCCAAGCCC
GACAGCGCCTCTCTGCAAGGGGGCATGGGGCAGGGGCAG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9843:84..2722-

>mRNA_D-mesarthrocarpus_Contig9843.1.1 ID=mRNA_D-mesarthrocarpus_Contig9843.1.1|Name=mRNA_D-mesarthrocarpus_Contig9843.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=525bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9843:84..2722- (Discosporangium mesarthrocarpum MT17_79)
ATCGATAGGGCCGAGTCCAAGGAGAAGGACCAGAGGAGGGCCCTCGACGG
ACTTCGCTTGTCCATGGGGGAGAATGCCAGGAGGGCAGAGCGGGAGCTCC
GGGGGCTCCGTGCGGAGGTGTTGACAGCGAGGAACGAGGCCACAGCACTG
CGGGCCCGTCTCGTCTGCGTCCAGGGGAGGAGAGCGGCCGAGAAGGACGC
TGCCAGGGTCAGGGTGCAGGAGCTCGAGAACTTCGTGGACATCGAGTGCA
GGGCATCGACGAGGGTCTCCCCCAGGGCAACAAAGGGCCCACAGAGACTC
TCTCTGGCGGCCCAGAGCCCCACAAATATGGCCCAGAGCCCTTTCAAGGA
CAGAAGACAGGGTGGCACAGCAACAAGGCCACGAGGGGCAGGGAGAGAGG
CTGCAGGGGCGGGCTCAGACCCCCCATCGGGGGGGTCATTGAGTAAGAGG
GGTCAGGGCCAGCCGCCCAGCCTGCTGTTCCAAGCCCGACAGCGCCTCTC
TGCAAGGGGGCATGGGGCAGGGGCA
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