mRNA_D-mesarthrocarpus_Contig9836.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9836.2.1 vs. uniprot
Match: A0A6H5L3F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3F4_9PHAE) HSP 1 Score: 99.0 bits (245), Expect = 9.250e-23 Identity = 51/75 (68.00%), Postives = 57/75 (76.00%), Query Frame = 1
Query: 7 LPTP---GDMRCIQERQLRHPASA----FAVSP-PCRHGFPQAFGFYPSSHRISSGLFRLSCPMLVQAIDTLEKE 207
+PTP GD+RCI+ERQLRH A A VSP PCRHGFPQAF F P H++SSGLFRLSCP+LVQAID LE E
Sbjct: 129 VPTPATEGDLRCIEERQLRHKAGASSRSMGVSPNPCRHGFPQAFAFDPCGHKVSSGLFRLSCPLLVQAIDLLEDE 203
BLAST of mRNA_D-mesarthrocarpus_Contig9836.2.1 vs. uniprot
Match: A0A6S9FG26_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9FG26_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 3.180e-21 Identity = 40/66 (60.61%), Postives = 52/66 (78.79%), Query Frame = 1
Query: 10 PTPGDMRCIQERQLRHPASAFAVSPPCRHGFPQAFGFYPSSHRISSGLFRLSCPMLVQAIDTLEKE 207
PTP D+ CI+ RQL H A+ F+V C++GFPQAFGF+P H++SSGLFRLSCP+LV+A+D E E
Sbjct: 65 PTPEDIDCIENRQLEHGANIFSVGQRCKYGFPQAFGFHPVEHKVSSGLFRLSCPLLVRAVDEWEAE 130
BLAST of mRNA_D-mesarthrocarpus_Contig9836.2.1 vs. uniprot
Match: A0A7S2HF12_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HF12_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 1.480e-20 Identity = 40/67 (59.70%), Postives = 51/67 (76.12%), Query Frame = 1
Query: 7 LPTPGDMRCIQERQLRHPASAFAVSPPCRHGFPQAFGFYPSSHRISSGLFRLSCPMLVQAIDTLEKE 207
+PT D+ CI+ RQL H A+ F V C++GFPQAFGF+P H++SSGLFRLSCP+LV+AID E E
Sbjct: 34 VPTLSDINCIENRQLEHSANIFFVGKRCKYGFPQAFGFHPVEHKVSSGLFRLSCPLLVKAIDEWEGE 100
BLAST of mRNA_D-mesarthrocarpus_Contig9836.2.1 vs. uniprot
Match: A0A7S0BWE2_9STRA (Hypothetical protein (Fragment) n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BWE2_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 3.300e-18 Identity = 35/64 (54.69%), Postives = 46/64 (71.88%), Query Frame = 1
Query: 10 PTPGDMRCIQERQLRHPASAFAVSPPCRHGFPQAFGFYPSSHRISSGLFRLSCPMLVQAIDTLE 201
PT D+ CI + Q+ HP AF++ C HG+PQA+G +P ++IS GLFRL+CPMLVQAID E
Sbjct: 34 PTKSDIDCIHQHQIHHPIQAFSIGQKCTHGYPQAYGNHPCEYKISGGLFRLTCPMLVQAIDEWE 97
BLAST of mRNA_D-mesarthrocarpus_Contig9836.2.1 vs. uniprot
Match: A0A7S2PD55_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PD55_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 2.330e-16 Identity = 41/69 (59.42%), Postives = 50/69 (72.46%), Query Frame = 1
Query: 7 LPTPGDMRCIQERQLRH---PASAFAVSPPCRHGFPQAFGFYPSSH-RISSGLFRLSCPMLVQAIDTLE 201
LPT D++ IQERQ+ H P+ VS PCRHGFPQAFGF+P+ ++ SGLFRLSCP+LVQ ID E
Sbjct: 102 LPTEQDLQTIQERQVCHKLEPSQVTCVSSPCRHGFPQAFGFHPTKGPKLVSGLFRLSCPLLVQQIDEWE 170
BLAST of mRNA_D-mesarthrocarpus_Contig9836.2.1 vs. uniprot
Match: D8LLL9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLL9_ECTSI) HSP 1 Score: 74.3 bits (181), Expect = 2.850e-14 Identity = 35/45 (77.78%), Postives = 38/45 (84.44%), Query Frame = 1
Query: 76 VSP-PCRHGFPQAFGFYPSSHRISSGLFRLSCPMLVQAIDTLEKE 207
VSP PCRHGFPQAF F P H++SSGLFRLSCP+LVQAID LE E
Sbjct: 3 VSPNPCRHGFPQAFAFDPCGHKVSSGLFRLSCPLLVQAIDLLEDE 47
BLAST of mRNA_D-mesarthrocarpus_Contig9836.2.1 vs. uniprot
Match: K8YZM2_NANGC (Uncharacterized protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8YZM2_NANGC) HSP 1 Score: 72.0 bits (175), Expect = 3.890e-13 Identity = 37/73 (50.68%), Postives = 48/73 (65.75%), Query Frame = 1
Query: 1 PRLPTPG---DMRCIQERQLRHPAS-AFAVSPPCRHGFPQAFGFYPSSHRISSGLFRLSCPMLVQAIDTLEKE 207
P PTP D+ CI++RQL HP + A C HGFPQAF F+P+ +SGLFRLSCP+LV+A+D E +
Sbjct: 107 PFRPTPASDEDIACIEQRQLGHPITCAGGPRQRCAHGFPQAFIFHPTKTTFNSGLFRLSCPLLVKAVDEFEAQ 179
BLAST of mRNA_D-mesarthrocarpus_Contig9836.2.1 vs. uniprot
Match: A0A7S2NAA6_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2NAA6_9EUKA) HSP 1 Score: 62.8 bits (151), Expect = 3.140e-11 Identity = 34/81 (41.98%), Postives = 45/81 (55.56%), Query Frame = 1
Query: 10 PTPGDMRCIQERQLRHPASAFA-VSPPCRHGFPQAFGFYPSSH--------------RISSGLFRLSCPMLVQAIDTLEKE 207
P+ D++ I+ RQ+ H S+ C+HGFPQAF F P RI SGLFRLSCP+LV+A+D E+E
Sbjct: 4 PSEEDLKVIENRQIGHKVSSIVGCGARCKHGFPQAFAFDPIERAPLILNGAVSGRKSRIESGLFRLSCPLLVKAVDEWERE 84
BLAST of mRNA_D-mesarthrocarpus_Contig9836.2.1 vs. uniprot
Match: A0A7S4MDR4_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4MDR4_9EUKA) HSP 1 Score: 57.4 bits (137), Expect = 5.180e-9 Identity = 32/80 (40.00%), Postives = 40/80 (50.00%), Query Frame = 1
Query: 10 PTPGDMRCIQERQLRHPASAFAVSPPCRHGFPQAFGFYPSSHR--------------ISSGLFRLSCPMLVQAIDTLEKE 207
P+ D I+ R L H S AV CRHG PQAF + P + + GLFRLSCP+LV+A+D E E
Sbjct: 12 PSAQDFAVIEGRHLGHAVSMIAVGRRCRHGVPQAFVWNPQARHSRAASDGKARERFPLEGGLFRLSCPLLVKAVDEWEAE 91
BLAST of mRNA_D-mesarthrocarpus_Contig9836.2.1 vs. uniprot
Match: A0A7S0L8X3_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L8X3_9EUKA) HSP 1 Score: 57.8 bits (138), Expect = 3.740e-8 Identity = 32/69 (46.38%), Postives = 45/69 (65.22%), Query Frame = 1
Query: 19 GDMRCIQERQL-RHPASAFAVSPPCRHGFPQAFGFYP-----SSHRISSGLFRLSCPMLVQAIDTLEKE 207
GD + RQ ++ ++A+A+ P CRHG+PQAF + P + I +GLFRLSCP+LV+AID E E
Sbjct: 74 GDELHVLHRQTGQNLSNAYALGPRCRHGYPQAFMWDPMPVERKAVPIDAGLFRLSCPLLVKAIDEWESE 142 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9836.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig9836.2.1 >prot_D-mesarthrocarpus_Contig9836.2.1 ID=prot_D-mesarthrocarpus_Contig9836.2.1|Name=mRNA_D-mesarthrocarpus_Contig9836.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=61bp MRCIQERQLRHPASAFAVSPPCRHGFPQAFGFYPSSHRISSGLFRLSCPMback to top mRNA from alignment at D-mesarthrocarpus_Contig9836:287..951- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig9836.2.1 ID=mRNA_D-mesarthrocarpus_Contig9836.2.1|Name=mRNA_D-mesarthrocarpus_Contig9836.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=665bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9836:287..951- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9836:287..951- >mRNA_D-mesarthrocarpus_Contig9836.2.1 ID=mRNA_D-mesarthrocarpus_Contig9836.2.1|Name=mRNA_D-mesarthrocarpus_Contig9836.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=183bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9836:287..951- (Discosporangium mesarthrocarpum MT17_79)back to top |