mRNA_D-mesarthrocarpus_Contig9828.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9828.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig9828.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9828.1.1 vs. uniprot
Match: A0A6H5L327_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L327_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 2.050e-19
Identity = 47/61 (77.05%), Postives = 54/61 (88.52%), Query Frame = 1
Query:   19 QAAARLRKSTTLCRESLRESVTLLRKIEQTAAQVLDLFPDLALAVEEGEPALAHEFFSTVK 201
            + AA LR+S  LCRESLRESVTLL+KIE+TAAQV+ LFPDLALAVEEGEP LA +FF+TVK
Sbjct:   11 EGAASLRRSAALCRESLRESVTLLKKIERTAAQVITLFPDLALAVEEGEPDLARDFFATVK 71          
BLAST of mRNA_D-mesarthrocarpus_Contig9828.1.1 vs. uniprot
Match: D7G8N3_ECTSI (Calcium/ calmodulin-dependent protein kinase 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8N3_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 2.830e-19
Identity = 47/61 (77.05%), Postives = 53/61 (86.89%), Query Frame = 1
Query:   19 QAAARLRKSTTLCRESLRESVTLLRKIEQTAAQVLDLFPDLALAVEEGEPALAHEFFSTVK 201
            Q AA LR+S  LCRESLRESVTLL+KIE+TAAQV+ LFPDL LAVEEGEP LA +FF+TVK
Sbjct:  561 QGAASLRRSAALCRESLRESVTLLKKIERTAAQVITLFPDLTLAVEEGEPDLARDFFATVK 621          
BLAST of mRNA_D-mesarthrocarpus_Contig9828.1.1 vs. uniprot
Match: A0A835YMG0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMG0_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 5.030e-19
Identity = 45/60 (75.00%), Postives = 49/60 (81.67%), Query Frame = 1
Query:   22 AAARLRKSTTLCRESLRESVTLLRKIEQTAAQVLDLFPDLALAVEEGEPALAHEFFSTVK 201
            AAA LR+S  LCRE+L  SV LLRKIE TA  VL+LFPDL LAVEE EPALAHEFFSTV+
Sbjct:   26 AAATLRRSALLCRENLLGSVKLLRKIEHTAGAVLELFPDLTLAVEEQEPALAHEFFSTVR 85          
BLAST of mRNA_D-mesarthrocarpus_Contig9828.1.1 vs. uniprot
Match: A0A836CDN4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDN4_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 1.940e-16
Identity = 41/59 (69.49%), Postives = 47/59 (79.66%), Query Frame = 1
Query:   25 AARLRKSTTLCRESLRESVTLLRKIEQTAAQVLDLFPDLALAVEEGEPALAHEFFSTVK 201
            AA LR+   LCRE+L  SV LLRK+E TAA VL+LFPDL LAVEE EPALA EFF+TV+
Sbjct:    1 AAALRRGALLCRENLLGSVKLLRKMEHTAAAVLELFPDLTLAVEEREPALAREFFATVR 59          
BLAST of mRNA_D-mesarthrocarpus_Contig9828.1.1 vs. uniprot
Match: A0A7S3HNC2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HNC2_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 5.370e-14
Identity = 37/62 (59.68%), Postives = 49/62 (79.03%), Query Frame = 1
Query:   19 QAAARLRKSTTLCRESLRESVTLLRKIEQTAAQVLDLFPDLALAVEEGEPALAHEFFSTVKV 204
            + A+ +R+  +LCRE L +S+ +LR++EQTAA VL +FPDL LAVEEGEP LA  FF+TVKV
Sbjct:  474 EVASEIREGASLCREQLTQSMKMLRQVEQTAAAVLSMFPDLELAVEEGEPQLALNFFATVKV 535          
BLAST of mRNA_D-mesarthrocarpus_Contig9828.1.1 vs. uniprot
Match: W7TGE4_9STRA (Calcium calmodulin-dependent protein kinase 1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TGE4_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 7.860e-14
Identity = 35/65 (53.85%), Postives = 49/65 (75.38%), Query Frame = 1
Query:    7 DQSSQAAARLRKSTTLCRESLRESVTLLRKIEQTAAQVLDLFPDLALAVEEGEPALAHEFFSTVK 201
            + S Q A  +++S  LCR  L  ++ LL+KIEQTAA VL++FPDL LA+E+ EP+LAH+FF TV+
Sbjct:   32 EHSPQDAHDVKRSAILCRAQLIYTIKLLKKIEQTAASVLEMFPDLELAIEDDEPSLAHDFFETVR 96          
BLAST of mRNA_D-mesarthrocarpus_Contig9828.1.1 vs. uniprot
Match: A0A7S3XQ85_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQ85_HETAK)

HSP 1 Score: 70.5 bits (171), Expect = 3.290e-13
Identity = 36/59 (61.02%), Postives = 45/59 (76.27%), Query Frame = 1
Query:   25 AARLRKSTTLCRESLRESVTLLRKIEQTAAQVLDLFPDLALAVEEGEPALAHEFFSTVK 201
            AA LR+   LCRE +RE+  LLRKIE+TAA VLD+F DL LAVEE EP LA +FF +++
Sbjct:   75 AATLRQGAVLCREQMRENAALLRKIERTAAAVLDIFADLELAVEEKEPELAQQFFESLR 133          
BLAST of mRNA_D-mesarthrocarpus_Contig9828.1.1 vs. uniprot
Match: A0A4D9CU84_9STRA (Protein kinase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CU84_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 3.060e-12
Identity = 35/65 (53.85%), Postives = 49/65 (75.38%), Query Frame = 1
Query:    7 DQSSQAAARLRKSTTLCRESLRESVTLLRKIEQTAAQVLDLFPDLALAVEEGEPALAHEFFSTVK 201
            + S Q A  +++S  LCR  L  ++ LL+KIEQTAA VL++FPDL LA+E+ EP+LAH+FF TV+
Sbjct:  451 EHSPQDAHDVKRSAILCRAQLIYTIKLLKKIEQTAASVLEMFPDLELAIEDDEPSLAHDFFETVR 515          
BLAST of mRNA_D-mesarthrocarpus_Contig9828.1.1 vs. uniprot
Match: A0A7S1UJ38_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJ38_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 5.140e-11
Identity = 35/59 (59.32%), Postives = 43/59 (72.88%), Query Frame = 1
Query:   25 AARLRKSTTLCRESLRESVTLLRKIEQTAAQVLDLFPDLALAVEEGEPALAHEFFSTVK 201
            AA +R+S  +CR +  ES  LLR+++QTA  VLDL PDL LAV E EP LA EFFSTV+
Sbjct:  419 AAEVRRSAIICRTAQVESAALLRRVQQTADSVLDLIPDLELAVREQEPELAMEFFSTVR 477          
BLAST of mRNA_D-mesarthrocarpus_Contig9828.1.1 vs. uniprot
Match: A0A7R9UH11_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UH11_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 6.900e-11
Identity = 36/63 (57.14%), Postives = 44/63 (69.84%), Query Frame = 1
Query:   13 SSQAAARLRKSTTLCRESLRESVTLLRKIEQTAAQVLDLFPDLALAVEEGEPALAHEFFSTVK 201
            S Q AA +R+S  +CR +  ES  LLR+++QTA  VLDL PDL LAV E EP LA EFF TV+
Sbjct:   87 SPQVAAEVRRSAIICRTAQVESAALLRRVQQTADSVLDLIPDLQLAVTEMEPELAMEFFQTVR 149          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9828.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A6H5L327_9PHAE2.050e-1977.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G8N3_ECTSI2.830e-1977.05Calcium/ calmodulin-dependent protein kinase 1 n=1... [more]
A0A835YMG0_9STRA5.030e-1975.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A836CDN4_9STRA1.940e-1669.49Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A7S3HNC2_9STRA5.370e-1459.68Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
W7TGE4_9STRA7.860e-1453.85Calcium calmodulin-dependent protein kinase 1 n=1 ... [more]
A0A7S3XQ85_HETAK3.290e-1361.02Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A4D9CU84_9STRA3.060e-1253.85Protein kinase domain-containing protein n=1 Tax=N... [more]
A0A7S1UJ38_9STRA5.140e-1159.32Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7R9UH11_9STRA6.900e-1157.14Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9828contigD-mesarthrocarpus_Contig9828:1977..2820 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G8N3
PFAMsFHA,Pkinase
Model size216
Max annot lvl2759|Eukaryota
KEGG koko:K05869
KEGG Pathwayko04020,ko04024,ko04211,ko04371,ko04380,ko04720,ko04722,ko04725,ko04921,ko04925,ko05031,ko05034,map04020,map04024,map04211,map04371,map04380,map04720,map04722,map04725,map04921,map04925,map05031,map05034
Hectar predicted targeting categoryother localisation
Exons2
Evalue4.63e-20
EggNOG OGsKOG0032@1|root,KOG0032@2759|Eukaryota
EC2.7.11.17
Descriptionprotein serine/threonine kinase activity
Cds size216
COG categoryT
BRITEko00000,ko00001,ko01000,ko01001
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791134.2213242-CDS-D-mesarthrocarpus_Contig9828:1976..20751680791134.2213242-CDS-D-mesarthrocarpus_Contig9828:1976..2075Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9828 1977..2075 -
1680791134.2374828-CDS-D-mesarthrocarpus_Contig9828:2703..28201680791134.2374828-CDS-D-mesarthrocarpus_Contig9828:2703..2820Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9828 2704..2820 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9828.1.1prot_D-mesarthrocarpus_Contig9828.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9828 1977..2820 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9828.1.1

>prot_D-mesarthrocarpus_Contig9828.1.1 ID=prot_D-mesarthrocarpus_Contig9828.1.1|Name=mRNA_D-mesarthrocarpus_Contig9828.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=72bp
MNDQSSQAAARLRKSTTLCRESLRESVTLLRKIEQTAAQVLDLFPDLALA
VEEGEPALAHEFFSTVKVGTV*
back to top

mRNA from alignment at D-mesarthrocarpus_Contig9828:1977..2820-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9828.1.1 ID=mRNA_D-mesarthrocarpus_Contig9828.1.1|Name=mRNA_D-mesarthrocarpus_Contig9828.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=844bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9828:1977..2820- (Discosporangium mesarthrocarpum MT17_79)
ATGAATGACCAATCATCGCAGGCGGCAGCGAGGCTCCGCAAGTCTACAAC CCTCTGCCGGGAGAGCCTGAGGGAAAGTGTGACCCTGCTCCGAAAAATTG AGCAAACTGCAGCCCAGGTGCATGTCGGTAGGGTAAGGGCTAGGGCTAGG GCTAGGGCTAGAAGGGTCTGTTGTATATTGCCCGCATTTTCTTGTTGAGG TTAGAGTAAGGGCTTCAGCTGGGGTTAGGGTTAGAAGGGTCTGTTGTGTA CAACCTGCATTATCCTGTTAAGGTCAGGGTAAGGGCTCCCGTTAGTTAGG GTTGGCTTTCTCATGTTTGTCAATGCAAAGCACACAAGTGTTAAGATTTA GGGTTAGGGCTTTTGAGGACTCAAAATGTGTTCGGTTTAGCACAAGAAAA AATGAGGTGAGGTGAAGGTTAGGGTTAGGGTTGAAGCAGTGCGGTGGGCG TACCCCAATCCAGAATCCCAACCCGTCTTCTTGTCTTTTCACCGTGCCTT TTCTTTTGAGCCCTATGGTGCTTGACCAGATCGAGTGGGAAGGGAAGTAG AGCTGTTTTCTCCTCCAATTCCCACCGATTTCCTGTTTTTCTGATGTGTT TGTGTGTCCCGGGAACTGCATTGCACGACTCCGGTGCCACATTGTTGCAA GTTGTTCCCATCCACGTCGCTTCTGTCACGCCCTGTCATTTGTTATTGTT CTTATTGAATTGCTTCGAGTGACTCATTATTGTGCCACTGCCCAGGTGCT GGATCTGTTCCCAGACCTTGCACTGGCAGTGGAGGAGGGGGAGCCAGCCC TGGCACACGAGTTTTTCTCCACAGTGAAGGTTGGTACAGTTTAA
back to top

Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9828:1977..2820-

>mRNA_D-mesarthrocarpus_Contig9828.1.1 ID=mRNA_D-mesarthrocarpus_Contig9828.1.1|Name=mRNA_D-mesarthrocarpus_Contig9828.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=216bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9828:1977..2820- (Discosporangium mesarthrocarpum MT17_79)
ATGAATGACCAATCATCGCAGGCGGCAGCGAGGCTCCGCAAGTCTACAAC
CCTCTGCCGGGAGAGCCTGAGGGAAAGTGTGACCCTGCTCCGAAAAATTG
AGCAAACTGCAGCCCAGGTGCTGGATCTGTTCCCAGACCTTGCACTGGCA
GTGGAGGAGGGGGAGCCAGCCCTGGCACACGAGTTTTTCTCCACAGTGAA
GGTTGGTACAGTTTAA
back to top