mRNA_D-mesarthrocarpus_Contig982.6.2 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig982.6.2 vs. uniprot
Match: D8LR53_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LR53_ECTSI) HSP 1 Score: 308 bits (790), Expect = 8.170e-99 Identity = 160/223 (71.75%), Postives = 186/223 (83.41%), Query Frame = 3 Query: 543 MDSGTSNRIRQMANFILQEAHEKGNEINIKTEHDFNLEKQMLVHNAKIKIQEEYMQKEKEREIQDRIQRSTMIGNSRVQKMTARDTLLKDLLGNATERITTVSNGDDYPDLLKSLMVQGMIKIEEENLTVVCREADIPAAKSVLDMAVEEYTALMKTDAEIDVKMNVTVNEVPSACLPASCPGGVVLSAVNGRILCDNTLSARLEIAYKELLPKIRGLLFPVA 1211 MD G SN+IRQMANFILQEAHEK NEINIKTEHDFNLEKQM+VH+AK+KIQEEY QKEK+REIQDRI RSTMIGNSRV+KMT+RD LL++LL +TE IT VS G YP LLK+L+VQ MIKIEE+ +TV+CREADI A KSV++ AV EY ALMK +A +D +TV E P+ CL A+CPGGV +SA NGRI+CDNTLS+RL + Y ELLPKIRGLLFP A Sbjct: 1 MDQGASNQIRQMANFILQEAHEKANEINIKTEHDFNLEKQMIVHSAKLKIQEEYTQKEKDREIQDRISRSTMIGNSRVKKMTSRDNLLQELLAASTEEITKVSKGSQYPTLLKALIVQSMIKIEEDKITVICREADISAVKSVVNDAVSEYVALMKAEAGVDKVPAITVEEDPARCLSANCPGGVAVSAANGRIVCDNTLSSRLTVIYSELLPKIRGLLFPNA 223
BLAST of mRNA_D-mesarthrocarpus_Contig982.6.2 vs. uniprot
Match: A0A835YLP4_9STRA (ATPase, V1/A1 complex, subunit E n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLP4_9STRA) HSP 1 Score: 256 bits (653), Expect = 2.500e-78 Identity = 138/224 (61.61%), Postives = 175/224 (78.12%), Query Frame = 3 Query: 543 MDSGTSNRIRQMANFILQEAHEKGNEINIKTEHDFNLEKQMLVHNAKIKIQEEYMQKEKEREIQDRIQRSTMIGNSRVQKMTARDTLLKDLLGNATERITTVSNGDD-YPDLLKSLMVQGMIKIEEENLTVVCREADIPAAKSVLDMAVEEYTALMKTDAEIDVKMNVTVNEVPSACLPASCPGGVVLSAVNGRILCDNTLSARLEIAYKELLPKIRGLLFPVA 1211 M++G++++IRQM NFILQEAHEK EI +KTEHDFNLEKQMLVHNAK+KIQEEY+QK+K+R +QDRI RS M+G SRVQKMT+RD LL+ LL + T I VS+ D YP LL++L+VQG+IKIEE+++TV R AD+ A KSV AV +Y A M+ +A + V VTVNE P+ CL A+ PGG+VL A GRI+CDN L+ARL I Y++LLPK+R LLFP A Sbjct: 1 MEAGSASQIRQMVNFILQEAHEKAVEIKLKTEHDFNLEKQMLVHNAKLKIQEEYVQKDKDRAVQDRIARSGMVGTSRVQKMTSRDQLLQTLLADTTATIDKVSHSADAYPKLLRTLLVQGLIKIEEDDVTVHVRTADVAAMKSVAADAVADYKAQMQKEANLAVTPTVTVNEDPAKCLSAASPGGLVLVAAAGRIVCDNQLAARLSIVYQDLLPKVRALLFPSA 224
BLAST of mRNA_D-mesarthrocarpus_Contig982.6.2 vs. uniprot
Match: A0A835YSA8_9STRA (ATPase, V1/A1 complex, subunit E n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSA8_9STRA) HSP 1 Score: 255 bits (652), Expect = 3.290e-78 Identity = 140/221 (63.35%), Postives = 169/221 (76.47%), Query Frame = 3 Query: 543 MDSGTSNRIRQMANFILQEAHEKGNEINIKTEHDFNLEKQMLVHNAKIKIQEEYMQKEKEREIQDRIQRSTMIGNSRVQKMTARDTLLKDLLGNATERITTVSNGDDYPDLLKSLMVQGMIKIEEENLTVVCREADIPAAKSVLDMAVEEYTALMKTDAEIDVKMNVTVNEVPSACLPASCPGGVVLSAVNGRILCDNTLSARLEIAYKELLPKIRGLLFP 1205 M+SG+SN+IRQM NFILQEAHEK EI +KTEHDFNLEKQMLVHNAK+KIQEEY+QK+K+R +QDRI RS M+G SRV+KMTARD LL+ LL T I V++ +YP LLK L+VQG+IKIEE ++ V R+ADI A KSV AV Y A M+ DA + V VTVNE P+ CL + PGG+VL A GRI+CDN L+ARL I Y++LLPKIR LLFP Sbjct: 1 MESGSSNQIRQMVNFILQEAHEKAVEIKLKTEHDFNLEKQMLVHNAKLKIQEEYVQKDKDRAVQDRIARSGMVGASRVKKMTARDQLLQSLLAETTATIDKVAHSAEYPALLKGLLVQGLIKIEESDVIVHVRKADISAMKSVAADAVSAYKAQMQKDANMAVTPIVTVNEDPAKCLSDASPGGLVLVAAAGRIVCDNQLAARLAIVYQDLLPKIRSLLFP 221
BLAST of mRNA_D-mesarthrocarpus_Contig982.6.2 vs. uniprot
Match: A0A6U0FKI3_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A6U0FKI3_9STRA) HSP 1 Score: 228 bits (582), Expect = 7.350e-68 Identity = 117/216 (54.17%), Postives = 158/216 (73.15%), Query Frame = 3 Query: 558 SNRIRQMANFILQEAHEKGNEINIKTEHDFNLEKQMLVHNAKIKIQEEYMQKEKEREIQDRIQRSTMIGNSRVQKMTARDTLLKDLLGNATERITTVSNGDDYPDLLKSLMVQGMIKIEEENLTVVCREADIPAAKSVLDMAVEEYTALMKTDAEIDVKMNVTVNEVPSACLPASCPGGVVLSAVNGRILCDNTLSARLEIAYKELLPKIRGLLFP 1205 S++IRQM NFILQEAHEK NEI +KTEHDFNLEKQ LVH AK+ +QEE+ +KEK+RE+Q+RI RS IG RV+KM RD LL+ L+ A E+ V+ G +YP LL+ L+VQG+IKIEE +T+ RE DI K +L A+ EY +M+ ++ + + +VTV+E P+ L GGV L+A+NG+I+CDNT+S+RL + Y+ELLP IR +LFP Sbjct: 3 SDQIRQMVNFILQEAHEKANEIRVKTEHDFNLEKQTLVHEAKLNVQEEFAKKEKDREVQERIARSAEIGECRVKKMKLRDGLLQQLISEAGEKCGMVARGQNYPHLLQKLIVQGLIKIEENTVTIYTREEDISVVKQILPDAISEYVDIMERESGVKLDPDVTVSEDPAKVLGEDTYGGVTLTAINGKIVCDNTMSSRLNLVYEELLPSIRAILFP 218
BLAST of mRNA_D-mesarthrocarpus_Contig982.6.2 vs. uniprot
Match: B7G7X7_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G7X7_PHATC) HSP 1 Score: 227 bits (578), Expect = 2.960e-67 Identity = 115/216 (53.24%), Postives = 160/216 (74.07%), Query Frame = 3 Query: 558 SNRIRQMANFILQEAHEKGNEINIKTEHDFNLEKQMLVHNAKIKIQEEYMQKEKEREIQDRIQRSTMIGNSRVQKMTARDTLLKDLLGNATERITTVSNGDDYPDLLKSLMVQGMIKIEEENLTVVCREADIPAAKSVLDMAVEEYTALMKTDAEIDVKMNVTVNEVPSACLPASCPGGVVLSAVNGRILCDNTLSARLEIAYKELLPKIRGLLFP 1205 +++IRQM NFILQEAHEK NEI +KTEHDFNLEKQ LVH AK+ IQ+E+ +KEK+RE+Q RI RS IG RV+KM RD LL+ L+ +A + V+ G +YP LL+ L+VQG+IKIEE +TV CR DI + +LD+AV+EY +MK ++ + ++ V +NE + L + GG+VL+A+NG+I+CDNT+++RL + Y+ELLP IR +LFP Sbjct: 4 TDQIRQMVNFILQEAHEKANEIRVKTEHDFNLEKQTLVHEAKLNIQDEFTKKEKDREVQQRIARSAEIGECRVKKMKIRDDLLQKLVADAGAKCAVVARGQNYPQLLQKLIVQGLIKIEEMEVTVFCRNEDIGTIEKILDVAVQEYVEIMKRESGVTLEPKVVMNENRNRDLTTNSYGGIVLTALNGKIVCDNTMASRLNLVYEELLPSIRAILFP 219
BLAST of mRNA_D-mesarthrocarpus_Contig982.6.2 vs. uniprot
Match: A0A6U3VEJ0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3VEJ0_9STRA) HSP 1 Score: 226 bits (576), Expect = 5.840e-67 Identity = 118/218 (54.13%), Postives = 157/218 (72.02%), Query Frame = 3 Query: 558 SNRIRQMANFILQEAHEKGNEINIKTEHDFNLEKQMLVHNAKIKIQEEYMQKEKEREIQDRIQRSTMIGNSRVQKMTARDTLLKDLLGNATERITTVSNGDDYPDLLKSLMVQGMIKIEEENLTVVCREADIPAAKSVLDMAVEEYTALMKTDAEIDVKMNVTVNEVPSACLPASCPGGVVLSAVNGRILCDNTLSARLEIAYKELLPKIRGLLFPVA 1211 S++IRQM NFILQEAHEK NEI +KTEHDFNLEKQ LVH AK+ +QEE+ +KEK+RE+Q+RI RS IG RV+KM RD LL L A E+ V+ G +YP LL+ L+VQG+IKIEE ++ + R D+ + +L A+ EY +M+ ++ I +K NVTV+E P+ L AS GGV+L+A +GRI+CDNT+ +RL + Y ELLP IR +LFP A Sbjct: 3 SDQIRQMVNFILQEAHEKANEIRVKTEHDFNLEKQTLVHEAKLSVQEEFAKKEKDREVQERIARSAEIGECRVKKMRLRDGLLNQLTAEAAEKCGMVARGQNYPHLLQKLIVQGLIKIEEISVVIYTRAEDVSVVQQILPDAISEYVDIMERESGIKLKPNVTVSEDPAKVLGASTQGGVILTARDGRIVCDNTMQSRLTLVYSELLPSIRAILFPEA 220
BLAST of mRNA_D-mesarthrocarpus_Contig982.6.2 vs. uniprot
Match: A0A448ZSP1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZSP1_9STRA) HSP 1 Score: 225 bits (574), Expect = 1.120e-66 Identity = 116/216 (53.70%), Postives = 155/216 (71.76%), Query Frame = 3 Query: 558 SNRIRQMANFILQEAHEKGNEINIKTEHDFNLEKQMLVHNAKIKIQEEYMQKEKEREIQDRIQRSTMIGNSRVQKMTARDTLLKDLLGNATERITTVSNGDDYPDLLKSLMVQGMIKIEEENLTVVCREADIPAAKSVLDMAVEEYTALMKTDAEIDVKMNVTVNEVPSACLPASCPGGVVLSAVNGRILCDNTLSARLEIAYKELLPKIRGLLFP 1205 S++IRQM NFILQEAHEK NEI +KTEHDFNLEKQ LVH AK+ IQ+++ +KEK+ EIQ+RI RS+ IG RV+KM RD LL LL + V+ G +YP LL+ L+VQ +IKIEE N + CR D+ K VL A++EY +MK ++ + + NVT+N LP S GG+V++A+NG+I+CDNT+SARLE+ Y+ELLP IR ++FP Sbjct: 3 SDQIRQMVNFILQEAHEKANEIRVKTEHDFNLEKQTLVHEAKLSIQDDFAKKEKQHEIQERIARSSEIGACRVKKMQLRDELLNKLLAEGGAKCAVVARGANYPQLLQKLIVQCLIKIEENNTEIYCRTEDVDTVKGVLPDAIKEYVEIMKRESGVTLSPNVTMNADADKNLPESSHGGIVMTALNGKIVCDNTMSARLELVYEELLPSIRSIMFP 218
BLAST of mRNA_D-mesarthrocarpus_Contig982.6.2 vs. uniprot
Match: A0A7S2V0J1_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0J1_9STRA) HSP 1 Score: 225 bits (573), Expect = 1.840e-66 Identity = 123/223 (55.16%), Postives = 162/223 (72.65%), Query Frame = 3 Query: 543 MDSGTSNR-IRQMANFILQEAHEKGNEINIKTEHDFNLEKQMLVHNAKIKIQEEYMQKEKEREIQDRIQRSTMIGNSRVQKMTARDTLLKDLLGNATERITTVSNGDDYPDLLKSLMVQGMIKIEEENLTVVCREADIPAAKSVLDMAVEEYTALMKTDAEIDVK-MNVTVNEVPSACLPASCPGGVVLSAVNGRILCDNTLSARLEIAYKELLPKIRGLLFP 1205 MDS S++ I+QM NFILQEAHEK NEI+IKTEHDFNLEKQMLVHNAK++IQEEY QKEK+RE+QDRI RS+ +G +RV+KM RD LLKDL + + ++G Y LL+ LMVQG+IK+ E+++ V+ R+ D+ A K V AV+EY +MK +A DV + + VNE A LPA GG+V++A + RI+ DNT RL++AY ELLP++R LFP Sbjct: 1 MDSSQSSKQIKQMVNFILQEAHEKANEIHIKTEHDFNLEKQMLVHNAKLRIQEEYTQKEKDREVQDRIARSSKVGAARVKKMVQRDDLLKDLQERSLQACKQQASGPQYEQLLQKLMVQGLIKMGEKDVQVLARQVDVQACKRVSQAAVQEYYDVMKKEASQDVTGVTIEVNENADAMLPARSAGGIVMTAFHDRIVLDNTFDTRLQLAYSELLPQVRAKLFP 223
BLAST of mRNA_D-mesarthrocarpus_Contig982.6.2 vs. uniprot
Match: A0A7S1YZ44_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YZ44_TRICV) HSP 1 Score: 224 bits (570), Expect = 4.480e-66 Identity = 116/216 (53.70%), Postives = 156/216 (72.22%), Query Frame = 3 Query: 558 SNRIRQMANFILQEAHEKGNEINIKTEHDFNLEKQMLVHNAKIKIQEEYMQKEKEREIQDRIQRSTMIGNSRVQKMTARDTLLKDLLGNATERITTVSNGDDYPDLLKSLMVQGMIKIEEENLTVVCREADIPAAKSVLDMAVEEYTALMKTDAEIDVKMNVTVNEVPSACLPASCPGGVVLSAVNGRILCDNTLSARLEIAYKELLPKIRGLLFP 1205 S++IRQM NFILQEAHEK NEI +KTEHDFNLEKQ LVH AK+ IQEE+ +KEK+REIQ+RIQRS IG RV+KM RD LL+ L+ A + ++ G +Y LL+ L+VQG++KIEE +T+ RE D+ K +L A+EEY ++M+ ++ I + VTV+E + L S GGV L A +G+I+CDNT++ARL + Y+ELLP IR +LFP Sbjct: 3 SDQIRQMVNFILQEAHEKANEIRVKTEHDFNLEKQTLVHEAKLNIQEEFAKKEKDREIQERIQRSAEIGECRVKKMKVRDDLLQTLVSEAGSKCAMIARGPNYAHLLQKLIVQGLVKIEENEVTIFTREEDVSVVKQILPEAIEEYVSIMERESGIKLTPEVTVSEDSTKFLGESTHGGVTLKAYDGKIVCDNTMTARLNLVYEELLPSIRAILFP 218
BLAST of mRNA_D-mesarthrocarpus_Contig982.6.2 vs. uniprot
Match: A0A7S4HII8_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HII8_9STRA) HSP 1 Score: 225 bits (574), Expect = 5.320e-66 Identity = 123/216 (56.94%), Postives = 157/216 (72.69%), Query Frame = 3 Query: 558 SNRIRQMANFILQEAHEKGNEINIKTEHDFNLEKQMLVHNAKIKIQEEYMQKEKEREIQDRIQRSTMIGNSRVQKMTARDTLLKDLLGNATERITTVSNGDDYPDLLKSLMVQGMIKIEEENLTVVCREADIPAAKSVLDMAVEEYTALMKTDAEIDVKMNVTVNEVPSACLPASCPGGVVLSAVNGRILCDNTLSARLEIAYKELLPKIRGLLFP 1205 S++IRQM NFILQEAHEK NEI +KTEHDFNLEKQ LVH AK+ IQE++ QKEK+REIQ+RIQRS IG RV+KM RD LL+ LL A + V+ G +YP LL+ L+VQG+IKIEE ++ V CR AD+ VL AV+EY +M+ ++ I + NV VNE S L S GGV L+A G+I+CDNT++ARL++ Y+ELLP IR +LFP Sbjct: 52 SDQIRQMVNFILQEAHEKANEIRVKTEHDFNLEKQTLVHEAKLNIQEDFAQKEKDREIQERIQRSAEIGECRVKKMKVRDELLQTLLSEAGSKCGMVARGQNYPHLLQKLIVQGLIKIEENDVVVYCRGADVGIVTQVLPEAVKEYVEIMERESGIKLSPNVKVNEDRSRDLGDSTFGGVRLTADLGKIVCDNTMAARLQLVYEELLPSIRAILFP 267 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig982.6.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig982.6.2 >prot_D-mesarthrocarpus_Contig982.6.2 ID=prot_D-mesarthrocarpus_Contig982.6.2|Name=mRNA_D-mesarthrocarpus_Contig982.6.2|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=226bp MDSGTSNRIRQMANFILQEAHEKGNEINIKTEHDFNLEKQMLVHNAKIKIback to top mRNA from alignment at D-mesarthrocarpus_Contig982:10667..15304- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig982.6.2 ID=mRNA_D-mesarthrocarpus_Contig982.6.2|Name=mRNA_D-mesarthrocarpus_Contig982.6.2|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=4638bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig982:10667..15304- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig982:10667..15304- >mRNA_D-mesarthrocarpus_Contig982.6.2 ID=mRNA_D-mesarthrocarpus_Contig982.6.2|Name=mRNA_D-mesarthrocarpus_Contig982.6.2|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=678bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig982:10667..15304- (Discosporangium mesarthrocarpum MT17_79)back to top |