mRNA_D-mesarthrocarpus_Contig982.5.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig982.5.1
Unique NamemRNA_D-mesarthrocarpus_Contig982.5.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig982.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig982contigD-mesarthrocarpus_Contig982:7641..9996 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Model size2178
Hectar predicted targeting categoryother localisation
Exons2
Ec32 ortholog descriptionPhox homologous domain
Ec32 orthologEc-06_004290.1
Cds size1872
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791133.5236642-CDS-D-mesarthrocarpus_Contig982:7640..91731680791133.5236642-CDS-D-mesarthrocarpus_Contig982:7640..9173Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig982 7641..9173 -
1680791133.5363512-CDS-D-mesarthrocarpus_Contig982:9353..96921680791133.5363512-CDS-D-mesarthrocarpus_Contig982:9353..9692Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig982 9354..9692 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791133.548674-UTR-D-mesarthrocarpus_Contig982:9692..99961680791133.548674-UTR-D-mesarthrocarpus_Contig982:9692..9996Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig982 9693..9996 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig982.5.1prot_D-mesarthrocarpus_Contig982.5.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig982 7641..9692 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig982.5.1

>prot_D-mesarthrocarpus_Contig982.5.1 ID=prot_D-mesarthrocarpus_Contig982.5.1|Name=mRNA_D-mesarthrocarpus_Contig982.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=624bp
MWGEEEGCYPPCSPSSISSRDLSVWSGYSSMGEPLAHSWEDGCDGRSSFS
RPKSVDEGSVPTFMDDELTRLHHDLTVRLAECMYRKGSHRSLSVGEGRDP
SDGDDCSDDDEDEATKTLRIDIDTALRNFFEESTNSTKTYPAGRRSSHQS
MPPKREKKDVRIRRRQSFSGRVFPGSEHLFSPWDVEHTLCPGLPANSNGV
QSKSNGWSSTDEDKPQEHIVLHQGSSSNFDTVLGLVNSENEVKSLPTPGT
RRWKSFLVRETLAEVTAQTRDAMADLHDLKALLQAEVRAGRRTAGEREAG
AGPEAGKFGVGVSEHGAEGPGTDQPAFRLRHLACEGVALSSRLIGRLDWA
STQLDEILAGPWLENQSNMESSILAGSDESSRGASFARISKLHLRRSSTA
LLQSRQLSKDMEPISCSVNGYRVVCSFPQFFVYFQLNITQEETSWGVERS
LDEFRSLRRTLAQTFGEDKVPPLNLGEGWLESAGLGTLMGAAGMTPESLA
ERQILVAEWLASVLADPAFMSRELIVFLDGKEQDFPAVMYHDIGTLLPGH
RRGGRNRDMENMDLLLGSASRGRDKNMKARGSAAASHTSEDDGGTVRKDS
WVELGSGRGGGHRCSKPWSEQLGE
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mRNA from alignment at D-mesarthrocarpus_Contig982:7641..9996-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig982.5.1 ID=mRNA_D-mesarthrocarpus_Contig982.5.1|Name=mRNA_D-mesarthrocarpus_Contig982.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2356bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig982:7641..9996- (Discosporangium mesarthrocarpum MT17_79)
CTTCACTGAGGCGTACGTATGTGTAGACGTTACGTTTTAATGGAGGTGTT
GAAAACATCATTCAAGGGAACTTAAGATTTAGGCAACTTCAAGATTAGTG
ATGCGTTTTCTTTTTTTGCGTTAGCCTTCCCTCCACGCTAGGGGAATAGG
TGGAATTGGCGAGTTGTCCCTTTACGGCGGATAATCCAACACCAATAAAA
CGTTTCGGAAGATTCCAGATGACTGAGACCTACTACACGTTTCGATTTCA
AAGTTGTCGCAGAGAAATCCCGCTTTAACATTTGAGAGGGGGTTGCTGTG
GTTGATGTGGGGGGAGGAAGAAGGTTGTTACCCGCCGTGTTCGCCATCAT
CTATCTCAAGCAGGGATCTCAGTGTCTGGAGCGGATATTCTTCAATGGGG
GAACCACTAGCGCACAGCTGGGAAGATGGGTGTGATGGGCGGTCATCATT
TTCTCGGCCCAAATCTGTAGATGAAGGATCAGTGCCTACATTCATGGATG
ACGAGCTGACAAGGCTCCACCATGACCTTACGGTCAGGCTGGCCGAGTGT
ATGTATCGGAAAGGATCGCACCGATCCCTGAGCGTGGGTGAGGGACGTGA
CCCAAGCGACGGAGATGACTGCAGCGATGACGATGAGGACGAGGTGTGCA
ACTTGCTCAGGGACTGGCTTTTGTGGGCCGTGGTTCTATACCCTTATGGG
TGTCGTTGATGTGCTGCTGGAGCGTGAGCTCCGTAGTTTGAGCCCTGTGC
GTGGCTCTCGGGTGAAGACCTAACTCATTTCGCCACCATGCTTCTGCATT
CCTGCCTTTCTTGCCCTCTCCAGGCCACGAAAACTCTCCGGATAGATATA
GATACTGCTCTCAGGAACTTCTTCGAGGAATCCACAAACAGTACTAAAAC
ATATCCGGCTGGACGTCGGTCTTCTCACCAGTCCATGCCCCCGAAGAGGG
AAAAGAAAGACGTCCGGATCCGCCGACGCCAGTCCTTCTCTGGGCGTGTT
TTCCCAGGAAGTGAGCATCTGTTCAGTCCCTGGGACGTAGAGCACACACT
TTGCCCCGGCTTACCGGCTAACAGCAACGGCGTTCAGTCCAAGAGCAATG
GCTGGTCGAGCACGGATGAAGACAAGCCGCAGGAGCACATCGTTCTCCAT
CAGGGTAGCTCAAGCAATTTCGACACCGTGCTCGGCTTGGTGAACAGCGA
GAATGAGGTGAAGTCACTCCCCACACCGGGAACTAGGAGATGGAAATCGT
TCTTGGTGCGGGAAACCTTGGCAGAAGTTACCGCCCAGACTAGGGATGCC
ATGGCCGACCTACATGATCTGAAAGCTCTGCTGCAGGCTGAGGTTCGGGC
AGGGCGAAGGACTGCAGGGGAAAGGGAGGCGGGGGCCGGGCCCGAGGCAG
GGAAGTTCGGTGTAGGGGTGTCGGAACATGGCGCCGAAGGGCCGGGGACC
GACCAACCCGCGTTCAGGCTCCGGCACCTGGCCTGCGAAGGGGTGGCGCT
CAGCTCGCGCTTGATTGGGCGCCTCGACTGGGCCAGCACCCAGCTGGACG
AAATCTTGGCGGGCCCGTGGCTCGAAAACCAGAGCAACATGGAGTCCTCG
ATTCTAGCCGGCTCGGACGAATCCTCAAGGGGGGCTTCCTTCGCCAGGAT
CTCCAAGCTCCACCTCCGCCGCTCGTCGACGGCTCTGCTCCAGAGCCGCC
AGCTCTCGAAGGACATGGAGCCGATATCCTGCAGTGTGAACGGGTATCGC
GTGGTGTGCAGCTTCCCACAATTTTTCGTCTACTTCCAGCTGAACATCAC
CCAGGAAGAGACGTCGTGGGGGGTGGAGCGGAGCCTTGACGAGTTCCGAT
CCCTTCGCCGCACCCTTGCCCAGACCTTCGGGGAGGATAAGGTCCCACCC
CTCAACCTTGGTGAGGGGTGGCTCGAGAGCGCAGGCCTGGGGACCCTAAT
GGGAGCCGCCGGGATGACGCCTGAGTCTCTCGCAGAGAGGCAGATCTTGG
TGGCCGAGTGGCTCGCGTCTGTCCTCGCAGACCCTGCCTTCATGAGCCGT
GAGCTCATCGTCTTCCTCGACGGCAAGGAACAAGATTTCCCTGCAGTCAT
GTATCATGACATCGGTACTCTTCTCCCCGGCCACAGACGTGGGGGCAGGA
ACAGGGACATGGAAAATATGGATTTGCTCTTGGGGTCTGCCAGCAGGGGC
AGAGATAAGAATATGAAGGCCAGGGGCAGTGCGGCCGCTTCCCATACCTC
TGAAGATGATGGGGGCACGGTGCGTAAGGACAGCTGGGTGGAATTGGGGT
CAGGGAGGGGGGGTGGGCACAGGTGCAGTAAGCCTTGGTCTGAACAACTA
GGGGAG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig982:7641..9996-

>mRNA_D-mesarthrocarpus_Contig982.5.1 ID=mRNA_D-mesarthrocarpus_Contig982.5.1|Name=mRNA_D-mesarthrocarpus_Contig982.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1872bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig982:7641..9996- (Discosporangium mesarthrocarpum MT17_79)
ATGTGGGGGGAGGAAGAAGGTTGTTACCCGCCGTGTTCGCCATCATCTAT
CTCAAGCAGGGATCTCAGTGTCTGGAGCGGATATTCTTCAATGGGGGAAC
CACTAGCGCACAGCTGGGAAGATGGGTGTGATGGGCGGTCATCATTTTCT
CGGCCCAAATCTGTAGATGAAGGATCAGTGCCTACATTCATGGATGACGA
GCTGACAAGGCTCCACCATGACCTTACGGTCAGGCTGGCCGAGTGTATGT
ATCGGAAAGGATCGCACCGATCCCTGAGCGTGGGTGAGGGACGTGACCCA
AGCGACGGAGATGACTGCAGCGATGACGATGAGGACGAGGCCACGAAAAC
TCTCCGGATAGATATAGATACTGCTCTCAGGAACTTCTTCGAGGAATCCA
CAAACAGTACTAAAACATATCCGGCTGGACGTCGGTCTTCTCACCAGTCC
ATGCCCCCGAAGAGGGAAAAGAAAGACGTCCGGATCCGCCGACGCCAGTC
CTTCTCTGGGCGTGTTTTCCCAGGAAGTGAGCATCTGTTCAGTCCCTGGG
ACGTAGAGCACACACTTTGCCCCGGCTTACCGGCTAACAGCAACGGCGTT
CAGTCCAAGAGCAATGGCTGGTCGAGCACGGATGAAGACAAGCCGCAGGA
GCACATCGTTCTCCATCAGGGTAGCTCAAGCAATTTCGACACCGTGCTCG
GCTTGGTGAACAGCGAGAATGAGGTGAAGTCACTCCCCACACCGGGAACT
AGGAGATGGAAATCGTTCTTGGTGCGGGAAACCTTGGCAGAAGTTACCGC
CCAGACTAGGGATGCCATGGCCGACCTACATGATCTGAAAGCTCTGCTGC
AGGCTGAGGTTCGGGCAGGGCGAAGGACTGCAGGGGAAAGGGAGGCGGGG
GCCGGGCCCGAGGCAGGGAAGTTCGGTGTAGGGGTGTCGGAACATGGCGC
CGAAGGGCCGGGGACCGACCAACCCGCGTTCAGGCTCCGGCACCTGGCCT
GCGAAGGGGTGGCGCTCAGCTCGCGCTTGATTGGGCGCCTCGACTGGGCC
AGCACCCAGCTGGACGAAATCTTGGCGGGCCCGTGGCTCGAAAACCAGAG
CAACATGGAGTCCTCGATTCTAGCCGGCTCGGACGAATCCTCAAGGGGGG
CTTCCTTCGCCAGGATCTCCAAGCTCCACCTCCGCCGCTCGTCGACGGCT
CTGCTCCAGAGCCGCCAGCTCTCGAAGGACATGGAGCCGATATCCTGCAG
TGTGAACGGGTATCGCGTGGTGTGCAGCTTCCCACAATTTTTCGTCTACT
TCCAGCTGAACATCACCCAGGAAGAGACGTCGTGGGGGGTGGAGCGGAGC
CTTGACGAGTTCCGATCCCTTCGCCGCACCCTTGCCCAGACCTTCGGGGA
GGATAAGGTCCCACCCCTCAACCTTGGTGAGGGGTGGCTCGAGAGCGCAG
GCCTGGGGACCCTAATGGGAGCCGCCGGGATGACGCCTGAGTCTCTCGCA
GAGAGGCAGATCTTGGTGGCCGAGTGGCTCGCGTCTGTCCTCGCAGACCC
TGCCTTCATGAGCCGTGAGCTCATCGTCTTCCTCGACGGCAAGGAACAAG
ATTTCCCTGCAGTCATGTATCATGACATCGGTACTCTTCTCCCCGGCCAC
AGACGTGGGGGCAGGAACAGGGACATGGAAAATATGGATTTGCTCTTGGG
GTCTGCCAGCAGGGGCAGAGATAAGAATATGAAGGCCAGGGGCAGTGCGG
CCGCTTCCCATACCTCTGAAGATGATGGGGGCACGGTGCGTAAGGACAGC
TGGGTGGAATTGGGGTCAGGGAGGGGGGGTGGGCACAGGTGCAGTAAGCC
TTGGTCTGAACAACTAGGGGAG
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