mRNA_D-mesarthrocarpus_Contig9817.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9817.1.1 vs. uniprot
Match: A0A6H5JJN6_9PHAE (RT_RNaseH domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJN6_9PHAE) HSP 1 Score: 126 bits (317), Expect = 1.010e-31 Identity = 67/148 (45.27%), Postives = 90/148 (60.81%), Query Frame = 1
Query: 1 VLGYAHFQAAMNGSRTFRLVAEASTDGLPAVLEQGDVHGTYHPLYFLSQPTLSNEPNWSITELEPWNNYLGHQTFESLLLGTPLNILTDHQPLLNLATQSHEKFPRVHRWLDFLNAYGFHIQYRKGTNQGNADLLSRLPVPAQPSDKS 444
VL + ++ A++G R FRL A+AS GL AV+EQ G+ PL FLS+ T NE WS TELE + +L G P + +DHQPL NL + + EK RV RW DFL+AY + ++YR G NADL+SRLP+PA D++
Sbjct: 110 VLAFPCYEGAISGERPFRLTADASISGLGAVIEQEQRDGSIRPLCFLSRSTFPNETRWSPTELEAGAIVWAIKKNRTLFYGIPFEVYSDHQPLRNLGSLA-EKNNRVQRWYDFLSAYTYELKYRPGRENANADLMSRLPLPATKEDEA 256
BLAST of mRNA_D-mesarthrocarpus_Contig9817.1.1 vs. uniprot
Match: A0A6H5KAM4_9PHAE (RT_RNaseH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAM4_9PHAE) HSP 1 Score: 126 bits (317), Expect = 3.290e-31 Identity = 67/148 (45.27%), Postives = 90/148 (60.81%), Query Frame = 1
Query: 1 VLGYAHFQAAMNGSRTFRLVAEASTDGLPAVLEQGDVHGTYHPLYFLSQPTLSNEPNWSITELEPWNNYLGHQTFESLLLGTPLNILTDHQPLLNLATQSHEKFPRVHRWLDFLNAYGFHIQYRKGTNQGNADLLSRLPVPAQPSDKS 444
VL + ++ A++G R FRL A+AS GL AV+EQ G+ PL FLS+ T NE WS TELE + +L G P + +DHQPL NL + + EK RV RW DFL+AY + ++YR G NADL+SRLP+PA D++
Sbjct: 110 VLAFPCYEGAISGERPFRLTADASISGLGAVIEQEQRDGSIRPLCFLSRSTFPNETRWSPTELEAGAIVWAIKKNRTLFYGIPFEVYSDHQPLRNLGSLA-EKNNRVQRWYDFLSAYTYELKYRPGRENANADLMSRLPLPATKEDEA 256
BLAST of mRNA_D-mesarthrocarpus_Contig9817.1.1 vs. uniprot
Match: A0A6H5JWI6_9PHAE (RT_RNaseH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI6_9PHAE) HSP 1 Score: 123 bits (308), Expect = 9.870e-31 Identity = 67/148 (45.27%), Postives = 89/148 (60.14%), Query Frame = 1
Query: 1 VLGYAHFQAAMNGSRTFRLVAEASTDGLPAVLEQGDVHGTYHPLYFLSQPTLSNEPNWSITELEPWNNYLGHQTFESLLLGTPLNILTDHQPLLNLATQSHEKFPRVHRWLDFLNAYGFHIQYRKGTNQGNADLLSRLPVPAQPSDKS 444
VL ++ A++G R FRL A+AS GL AV+EQG G+ PL FLS+ T N WS TELE + +L GTP + +DHQPL NL + + +K RV RW DFL+AY ++YR G NADL+SRLP+PA D++
Sbjct: 200 VLASPCYEGAISGERPFRLTADASISGLGAVIEQGQRDGSIRPLCFLSRSTFENVTRWSSTELEAGAT----KKNRTLFYGTPFEVYSDHQPLRNLGSWA-DKNNRVQRWYDFLSAYTHELKYRPGRENANADLMSRLPLPATKEDEA 342
BLAST of mRNA_D-mesarthrocarpus_Contig9817.1.1 vs. uniprot
Match: A0A6H5JWR4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWR4_9PHAE) HSP 1 Score: 125 bits (313), Expect = 2.130e-30 Identity = 66/148 (44.59%), Postives = 90/148 (60.81%), Query Frame = 1
Query: 1 VLGYAHFQAAMNGSRTFRLVAEASTDGLPAVLEQGDVHGTYHPLYFLSQPTLSNEPNWSITELEPWNNYLGHQTFESLLLGTPLNILTDHQPLLNLATQSHEKFPRVHRWLDFLNAYGFHIQYRKGTNQGNADLLSRLPVPAQPSDKS 444
VL + ++ A++G R FRL A+AS GL AV+EQ G+ PL FLS+ T NE WS T+LE + +L G P + +DHQPL NL + + EK RV RW DFL+AY + ++YR G NADL+SRLP+PA D++
Sbjct: 110 VLAFPCYEGAISGERPFRLTADASISGLGAVIEQEQRDGSIRPLCFLSRSTFPNETRWSPTKLEAGAIVWAIKQNRTLFYGIPFEVYSDHQPLRNLGSLA-EKNNRVQRWYDFLSAYTYELKYRPGRENANADLMSRLPLPATKEDEA 256
BLAST of mRNA_D-mesarthrocarpus_Contig9817.1.1 vs. uniprot
Match: A0A6H5KRW3_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRW3_9PHAE) HSP 1 Score: 124 bits (310), Expect = 4.870e-30 Identity = 67/148 (45.27%), Postives = 86/148 (58.11%), Query Frame = 1
Query: 1 VLGYAHFQAAMNGSRTFRLVAEASTDGLPAVLEQGDVHGTYHPLYFLSQPTLSNEPNWSITELEPWNNYLGHQTFESLLLGTPLNILTDHQPLLNLATQSHEKFPRVHRWLDFLNAYGFHIQYRKGTNQGNADLLSRLPVPAQPSDKS 444
VL + ++ A+ G R FRL+ +AS GL AV+EQ GT PL +LS+ T NE WS TELE + +L G P I +DHQPL NL + + EK RV RW DFL+AY + + YR G GNAD +SRLP+P D S
Sbjct: 265 VLAFPDYEGAITGKRKFRLITDASISGLGAVIEQEQEDGTVRPLCYLSRSTYPNERRWSATELECGAIVWAIKKNRTLFYGIPFQIYSDHQPLRNLESLA-EKNNRVQRWFDFLSAYTYELIYRPGKANGNADCMSRLPLPPMEEDAS 411
BLAST of mRNA_D-mesarthrocarpus_Contig9817.1.1 vs. uniprot
Match: A0A6H5K4J2_9PHAE (RT_RNaseH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4J2_9PHAE) HSP 1 Score: 116 bits (290), Expect = 2.960e-29 Identity = 63/142 (44.37%), Postives = 86/142 (60.56%), Query Frame = 1
Query: 19 FQAAMNGSRTFRLVAEASTDGLPAVLEQGDVHGTYHPLYFLSQPTLSNEPNWSITELEPWNNYLGHQTFESLLLGTPLNILTDHQPLLNLATQSHEKFPRVHRWLDFLNAYGFHIQYRKGTNQGNADLLSRLPVPAQPSDKS 444
++ A++G R FRL A+AS GL AV+EQ G+ PL FLS+ T+ NE WS TELE + +L G P + +DHQPL NL + + EK RV RW D L+A ++YR G + NADL+SRLP+PA D++
Sbjct: 23 YEGAISGERPFRLTADASISGLAAVIEQEQRDGSIRPLCFLSRSTVPNETRWSPTELEAGAIVWAIKKNRTLFYGIPFEVYSDHQPLRNLGSLA-EKNNRVQRWYDCLSACTNKLKYRPGRDNANADLMSRLPLPATKEDEA 163
BLAST of mRNA_D-mesarthrocarpus_Contig9817.1.1 vs. uniprot
Match: A0A6H5L269_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L269_9PHAE) HSP 1 Score: 119 bits (297), Expect = 3.030e-28 Identity = 65/146 (44.52%), Postives = 82/146 (56.16%), Query Frame = 1
Query: 1 VLGYAHFQAAMNGSRTFRLVAEASTDGLPAVLEQGDVHGTYHPLYFLSQPTLSNEPNWSITELEPWNNYLGHQTFESLLLGTPLNILTDHQPLLNLATQSHEKFPRVHRWLDFLNAYGFHIQYRKGTNQGNADLLSRLPVPAQPSD 438
VL + + AA++G+R FRL +AS G AVLEQ GT PL ++S+ TL NE NW ++ LE + L G P TDHQPLL+ + EK PRV R DFL+AY F + YRKG AD LSRLP P +D
Sbjct: 360 VLAFPDYDAAIDGTRKFRLTTDASISGFGAVLEQPQEDGTVRPLVYISRSTLPNEANWDVSSLECGALVWAIRKLRVYLYGIPFEAFTDHQPLLSFISMG-EKKPRVQRMCDFLSAYSFTLSYRKGKENQVADALSRLPQPPTAAD 504
BLAST of mRNA_D-mesarthrocarpus_Contig9817.1.1 vs. uniprot
Match: A0A6H5L3E9_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3E9_9PHAE) HSP 1 Score: 114 bits (285), Expect = 9.070e-28 Identity = 63/148 (42.57%), Postives = 86/148 (58.11%), Query Frame = 1
Query: 1 VLGYAHFQAAMNGSRTFRLVAEASTDGLPAVLEQGDVHGTYHPLYFLSQPTLSNEPNWSITELEPWNNYLGHQTFESLLLGTPLNILTDHQPLLNLATQSHEKFPRVHRWLDFLNAYGFHIQYRKGTNQGNADLLSRLPVPAQPSDKS 444
VL Y + A +GSR FRL +AS DG LEQ G+ P+ F+S+ TL +E +W+ +LE + + L GT I TDH+ L +LA E RV RWL+FL AY + ++YRKG++ GNAD LSRLP+ A D+S
Sbjct: 145 VLVYPDWDAVSDGSRPFRLYCDASKDGFGGTLEQEQPDGSVRPIVFVSRTTLESERHWTPLDLEAGSIVWCVKGLRGYLWGTHFKIFTDHKSLEHLAKVG-ETNARVQRWLEFLTAYSYTLEYRKGSSNGNADFLSRLPIEATERDRS 291
BLAST of mRNA_D-mesarthrocarpus_Contig9817.1.1 vs. uniprot
Match: A0A6H5KIF5_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIF5_9PHAE) HSP 1 Score: 114 bits (285), Expect = 1.240e-26 Identity = 62/148 (41.89%), Postives = 84/148 (56.76%), Query Frame = 1
Query: 1 VLGYAHFQAAMNGSRTFRLVAEASTDGLPAVLEQGDVHGTYHPLYFLSQPTLSNEPNWSITELEPWNNYLGHQTFESLLLGTPLNILTDHQPLLNLATQSHEKFPRVHRWLDFLNAYGFHIQYRKGTNQGNADLLSRLPVPAQPSDKS 444
VL Y + A +GSR FRL +AS DG LEQ G+ P+ F+S+ TL +E +W+ +LE + + L GT I TDH+ L + A E RV RWL+FL AY + ++YRKG+ GNAD LSRLP+ A D+S
Sbjct: 728 VLVYPDWDAVSDGSRPFRLYCDASRDGFGGTLEQEQPDGSIRPIVFISRATLDSERHWTPLDLEAGSIVWSIKRLRGYLWGTKFRIFTDHKSLEHFAKVG-ENNARVQRWLEFLTAYNYTLEYRKGSANGNADFLSRLPIDAAECDRS 874
BLAST of mRNA_D-mesarthrocarpus_Contig9817.1.1 vs. uniprot
Match: A0A6H5JUZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUZ4_9PHAE) HSP 1 Score: 114 bits (285), Expect = 1.280e-26 Identity = 62/148 (41.89%), Postives = 84/148 (56.76%), Query Frame = 1
Query: 1 VLGYAHFQAAMNGSRTFRLVAEASTDGLPAVLEQGDVHGTYHPLYFLSQPTLSNEPNWSITELEPWNNYLGHQTFESLLLGTPLNILTDHQPLLNLATQSHEKFPRVHRWLDFLNAYGFHIQYRKGTNQGNADLLSRLPVPAQPSDKS 444
VL Y + A +GSR FRL +AS DG LEQ G+ P+ F+S+ TL +E +W+ +LE + + L GT I TDH+ L + A E RV RWL+FL AY + ++YRKG+ GNAD LSRLP+ A D+S
Sbjct: 556 VLVYPDWDAVSDGSRPFRLYCDASRDGFGGTLEQEQPDGSIRPIVFISRATLDSERHWTPLDLEAGSIVWSIKRLRGYLWGTKFRIFTDHKSLEHFAKVG-ENNARVQRWLEFLTAYNYTLEYRKGSANGNADFLSRLPIDAAECDRS 702 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9817.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig9817.1.1 >prot_D-mesarthrocarpus_Contig9817.1.1 ID=prot_D-mesarthrocarpus_Contig9817.1.1|Name=mRNA_D-mesarthrocarpus_Contig9817.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=138bp MNGSRTFRLVAEASTDGLPAVLEQGDVHGTYHPLYFLSQPTLSNEPNWSIback to top mRNA from alignment at D-mesarthrocarpus_Contig9817:1769..2212- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig9817.1.1 ID=mRNA_D-mesarthrocarpus_Contig9817.1.1|Name=mRNA_D-mesarthrocarpus_Contig9817.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=444bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9817:1769..2212- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9817:1769..2212- >mRNA_D-mesarthrocarpus_Contig9817.1.1 ID=mRNA_D-mesarthrocarpus_Contig9817.1.1|Name=mRNA_D-mesarthrocarpus_Contig9817.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=414bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9817:1769..2212- (Discosporangium mesarthrocarpum MT17_79)back to top |