mRNA_D-mesarthrocarpus_Contig9816.3.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9816.3.1 vs. uniprot
Match: UPI000CD873B3 (uncharacterized protein LOC111883545 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD873B3) HSP 1 Score: 106 bits (265), Expect = 3.660e-21 Identity = 75/203 (36.95%), Postives = 107/203 (52.71%), Query Frame = 1
Query: 931 VLRHTRELSNGVWFDGKTGIRPIVDVVKAQPASKSRARGDPLPRPVM-VDRKSTRR**SMRPSPPSKAKMPWPPGHT--IFVQQDGAKSHTKKGVMKAIQ--TEAGTSIILETRPSNSPDLNVNDLGFFHSIQQLKEDVGVTTAEGLVEATHEAFNIHPRETLECVWHSLFAV*GEILGSKRDNSYKIPHSGKEQAERKGGTP 1524
V R + S F GK GI P + A+ +SK+R G +P++ V ++ TR + P +AK WP H IF+QQD AK H + ++ ++ G I L +PSNSPDLNV DLGFF +IQ L+E + T + LV A AF + L V+ +L EI+ + N+Y+IPH GK + ER+G P
Sbjct: 215 VARPRFDASGNEVFSGKIGIYPFTRLEPAKRSSKNRVAGTLETKPILSVTKEVTRSWLIEKVLPDIRAK--WPRSHVGPIFIQQDNAKPHIDVNDNEFLEAASQDGFDIRLNFQPSNSPDLNVLDLGFFRAIQSLQEQEALGTIDELVHAVQTAFEKMQSQQLNNVFLTLQTCMREIIKVQGGNNYQIPHIGKNRLEREGNLP 415
BLAST of mRNA_D-mesarthrocarpus_Contig9816.3.1 vs. uniprot
Match: UPI0007F012D1 (uncharacterized protein LOC108203813 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007F012D1) HSP 1 Score: 104 bits (259), Expect = 9.480e-21 Identity = 76/192 (39.58%), Postives = 99/192 (51.56%), Query Frame = 1
Query: 970 FDGKTGIRPIVDVVKAQPASKSRARGDPLPRPVMVDRKSTRR**SM----RPSPPSKAKMPWPPG-HTIFVQQDGAKSHTKKGVMKAIQTEA--GTSIILETRPSNSPDLNVNDLGFFHSIQQLKEDVGVTTAEGLVEATHEAFNIHPRETLECVWHSLFAV*GEILGSKRDNSYKIPHSGKEQAERKGGTP 1524
F GK GI P + A+ SK+R G + VD T+ + P AK WP G TI +QQD AK H + +Q + G I L +P NSPDLNV DLGFF SIQ L+ + TT E LV A ++F+ +P E L V+ + EI+ K DN YKIPH GK++ ER+G P
Sbjct: 154 FSGKIGIFPFTFIEPAKRNSKNRVAGTMV---TKVDESITKEKVKSCLIEKVIPAIHAK--WPQGMRTIIIQQDNAKPHIDCNNAEFMQAASKDGFDIRLICQPPNSPDLNVLDLGFFRSIQDLQHEKAPTTIEELVAAVKQSFDEYPVEKLNRVFLTQQTCMKEIMKFKGDNDYKIPHMGKDRLEREGTLP 340
BLAST of mRNA_D-mesarthrocarpus_Contig9816.3.1 vs. uniprot
Match: UPI002009A106 (uncharacterized protein LOC125220207 n=1 Tax=Salvia hispanica TaxID=49212 RepID=UPI002009A106) HSP 1 Score: 99.8 bits (247), Expect = 6.380e-20 Identity = 71/194 (36.60%), Postives = 103/194 (53.09%), Query Frame = 1
Query: 964 VWFDGKTGIRPIVDVVKAQPASKSRARGDPLPRPVM-VDRKSTRR**SMRPSPPSKAKMPWPPGHTIFV--QQDGAKSHTKKGV--MKAIQTEAGTSIILETRPSNSPDLNVNDLGFFHSIQQLKEDVGVTTAEGLVEATHEAFNIHPRETLECVWHSLFAV*GEILGSKRDNSYKIPHSGKEQAERKGGTPKN 1530
V FDGK GI P + V A+ +K+R G +P+ + ++ T++ + P K WP G + F+ QQD AK H +A T+ G +I L +P NSPD +VNDLG+F +IQ L+ T + LV+A ++F+ TL+ V+ SL + EI+ K N YKIPH GK R G P+N
Sbjct: 19 VLFDGKIGIFPFTEQVPAKRNNKNRCAGTLETKPIASITKEVTKQCIINKVIPTIMEK--WPEGKSKFITIQQDNAKPHIANHDPDFRAAATQNGFNIQLVQQPPNSPDTDVNDLGWFRAIQSLQLQTACNTIDDLVKAVEKSFHDLCPVTLDNVFLSLQSCMLEIMRLKGQNCYKIPHMGKASLRRSGQLPEN 210
BLAST of mRNA_D-mesarthrocarpus_Contig9816.3.1 vs. uniprot
Match: UPI0007EF40B3 (uncharacterized protein LOC108194535 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007EF40B3) HSP 1 Score: 103 bits (256), Expect = 6.380e-20 Identity = 74/201 (36.82%), Postives = 99/201 (49.25%), Query Frame = 1
Query: 931 VLRHTRELSNGVWFDGKTGIRPIVDVVKAQPASKSRARGDPLPRPV-MVDRKSTRR**SMRPSPPSKAKMPWPPGHTIFVQQDGAKSHTKKGVMKAIQTEA--GTSIILETRPSNSPDLNVNDLGFFHSIQQLKEDVGVTTAEGLVEATHEAFNIHPRETLECVWHSLFAV*GEILGSKRDNSYKIPHSGKEQAERKGGTP 1524
V R + FDGK GI P A + K+RARG +P+ + + ++ + P KAK P I +QQD A+ H + I+ G +I L +P+NSPDLN+NDLGFF IQ L+ + TT LV A EA+ TL VW SL EIL +N+YK+PH GK + ER G P
Sbjct: 231 VARPRYDADGNCTFDGKIGIFPFTFDEPAARSIKNRARGVIEVKPIESITKVVIKQCLLEKIIPAIKAKWPLDCNRPIVIQQDNARPHICNTDLDFIEVAKSDGFNITLANQPANSPDLNINDLGFFRVIQGLQHEKAPTTVCELVGAVLEAYEEVSDSTLNHVWLSLMGCMTEILRKDGNNNYKLPHIGKGKLERLGQLP 431
BLAST of mRNA_D-mesarthrocarpus_Contig9816.3.1 vs. uniprot
Match: UPI001C2659A6 (uncharacterized protein LOC121754350 n=3 Tax=Salvia splendens TaxID=180675 RepID=UPI001C2659A6) HSP 1 Score: 102 bits (255), Expect = 8.020e-20 Identity = 71/192 (36.98%), Postives = 98/192 (51.04%), Query Frame = 1
Query: 964 VWFDGKTGIRPIVDVVKAQPASKSRARGDPLPRPV-MVDRKSTRR**SMRPSPPSKAKMPWPPGHTIFVQQDGAKSHTKKGV--MKAIQTEAGTSIILETRPSNSPDLNVNDLGFFHSIQQLKEDVGVTTAEGLVEATHEAFNIHPRETLECVWHSLFAV*GEILGSKRDNSYKIPHSGKEQAERKGGTPKN 1530
V FDGK GI P V AQ SK+R G +P+ + ++ T++ + P K P I +QQD AK H K K + G S+ L +P SPD NVNDLG+F +IQ L+ T + L++A ++F+ +TL+ V+ SL + EIL K NSYK+PH GK R PKN
Sbjct: 219 VLFDGKIGIFPFTKQVAAQRTSKNRVAGTMETKPIESITKEVTKQCLINKIIPAIFEKWPEGASKRIRIQQDNAKPHIKDTDPDFKVAAQQHGFSMSLVQQPPCSPDTNVNDLGWFRAIQSLQVQTACKTIDDLIKAVEKSFHDLSPQTLDNVFLSLQSCMVEILKVKGQNSYKVPHLGKNNLRRNAQLPKN 410
BLAST of mRNA_D-mesarthrocarpus_Contig9816.3.1 vs. uniprot
Match: UPI001C26D8FD (uncharacterized protein LOC121759873 n=4 Tax=Salvia splendens TaxID=180675 RepID=UPI001C26D8FD) HSP 1 Score: 101 bits (251), Expect = 8.560e-20 Identity = 72/194 (37.11%), Postives = 100/194 (51.55%), Query Frame = 1
Query: 964 VWFDGKTGIRPIVDVVKAQPASKSRARGDPLPRPV-MVDRKSTRR**SMRPSPPSKAKMPWPPGHT--IFVQQDGAKSHTKKG--VMKAIQTEAGTSIILETRPSNSPDLNVNDLGFFHSIQQLKEDVGVTTAEGLVEATHEAFNIHPRETLECVWHSLFAV*GEILGSKRDNSYKIPHSGKEQAERKGGTPKN 1530
V FDGK GI V A+ +SK+R G +P+ + + TR + P KAK WP G T + +QQD A+ H K K ++G SI L +P NSPD NVNDLG+F +IQ L+ + LV A ++FN +TL+ V+ SL EI+ + N+YK+PH GK R PK+
Sbjct: 122 VLFDGKIGIFQFTKQVPAKRSSKNRMAGTLETKPIESITKDVTRDCLINKILPAIKAK--WPDGATKVLKIQQDNARPHIKDNDPAFKEAAQQSGFSISLVQQPPNSPDTNVNDLGWFRAIQSLQTQTACKNVDDLVNAVVQSFNELQPQTLDNVFLSLQGCFMEIMKVQGHNTYKLPHMGKAHLRRTNQLPKD 313
BLAST of mRNA_D-mesarthrocarpus_Contig9816.3.1 vs. uniprot
Match: UPI001C25F160 (uncharacterized protein LOC121760763 n=1 Tax=Salvia splendens TaxID=180675 RepID=UPI001C25F160) HSP 1 Score: 100 bits (250), Expect = 1.350e-19 Identity = 72/194 (37.11%), Postives = 99/194 (51.03%), Query Frame = 1
Query: 964 VWFDGKTGIRPIVDVVKAQPASKSRARGDPLPRPV-MVDRKSTRR**SMRPSPPSKAKMPWPPGHT--IFVQQDGAKSHTKKG--VMKAIQTEAGTSIILETRPSNSPDLNVNDLGFFHSIQQLKEDVGVTTAEGLVEATHEAFNIHPRETLECVWHSLFAV*GEILGSKRDNSYKIPHSGKEQAERKGGTPKN 1530
V FDGK GI P V A+ +SK+R G +P+ + R + P KAK WP G T + +QQD A+ H K K ++G SI L +P NSPD NVNDLG+F +IQ L+ + LV A ++FN +TL+ V+ SL EI+ + N+YK+PH GK R PK+
Sbjct: 133 VLFDGKIGIFPFTKQVHAKRSSKNRMAGTLETKPIESITNDVIRDCLINKILPAIKAK--WPDGATKVLKIQQDNARLHIKDNDPAFKEAAQQSGFSISLVQQPPNSPDTNVNDLGWFRAIQSLQTQTACKNVDDLVNAVVQSFNELQPQTLDNVFLSLQGCFMEIMKVQGHNTYKLPHMGKAHLRRTNQLPKD 324
BLAST of mRNA_D-mesarthrocarpus_Contig9816.3.1 vs. uniprot
Match: UPI000E7021A1 (uncharacterized protein LOC113294817 n=1 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E7021A1) HSP 1 Score: 98.2 bits (243), Expect = 1.510e-19 Identity = 69/188 (36.70%), Postives = 96/188 (51.06%), Query Frame = 1
Query: 970 FDGKTGIRPIVDVVKAQPASKSRARGDPLPRPVMVDRKSTRR**SMRPSPPSKAKMPWPPGHTIFVQQDGAKSHTKKGVMKAIQTEA--GTSIILETRPSNSPDLNVNDLGFFHSIQQLKEDVGVTTAEGLVEATHEAFNIHPRETLECVWHSLFAV*GEILGSKRDNSYKIPHSGKEQAERKGGTPK 1527
FDGK I P + A+ SK+R G +P+ V+ R + P + K G TI++QQD AK H K K ++ A G I L +PS PD+NV DLGFF SIQ L+ TT L+ A ++AFN +TL V+ SL E++ + N+YK+ H GK++ R G PK
Sbjct: 45 FDGKLSIFPFITKEAAKRTSKNRPAGTLEDKPITVNTDVVRDCLIEKLLPAIREKWQNYNGETIYIQQDNAKPHIKLNDEKFLREAAKDGFDIRLRFQPSQIPDMNVLDLGFFMSIQSLQHQEAPTTVAELLLAVNKAFNELNSQTLNDVFLSLQLCMVEVIKIRDGNNYKLKHMGKKRLARIGELPK 232
BLAST of mRNA_D-mesarthrocarpus_Contig9816.3.1 vs. uniprot
Match: UPI00052FF030 (uncharacterized protein LOC100842659 n=2 Tax=Brachypodium distachyon TaxID=15368 RepID=UPI00052FF030) HSP 1 Score: 100 bits (249), Expect = 1.550e-19 Identity = 65/188 (34.57%), Postives = 98/188 (52.13%), Query Frame = 1
Query: 970 FDGKTGIRPIVDVVKAQPASKSRARGDPLPRPVMVDRKSTRR**SMRPSPPSKAKMPWPPGH-TIFVQQDGAKSHTKKGVMKAIQ--TEAGTSIILETRPSNSPDLNVNDLGFFHSIQQLKEDVGVTTAEGLVEATHEAFNIHPRETLECVWHSLFAV*GEILGSKRDNSYKIPHSGKEQAERKGGTP 1524
FDGK G+ P V++V AQ +SK R +G + VD+ +R + P K K P H TIF+QQD AK+H + + + T G I + +P+NSPD NV DLG+F +IQ L + TT + ++ EAF +P E ++ + + EI+ K Y +PH K+ +R+G P
Sbjct: 137 FDGKVGVWPFVELVPAQRSSKRRGKGTLEIKSCPVDQSKSREFLITKVIPAIKEKWPQEDRHGTIFIQQDNAKTHVRIDDQEVNEAATSGGWDIRIVFQPTNSPDTNVLDLGYFAAIQALFQKKMPTTVDEMISKVEEAFAEYPAERSNRIFLTHQSCMREIIRQKGTIHYSVPHLKKKAMQRRGALP 324
BLAST of mRNA_D-mesarthrocarpus_Contig9816.3.1 vs. uniprot
Match: UPI002009D9EB (uncharacterized protein LOC125194549 n=1 Tax=Salvia hispanica TaxID=49212 RepID=UPI002009D9EB) HSP 1 Score: 101 bits (252), Expect = 2.040e-19 Identity = 75/231 (32.47%), Postives = 113/231 (48.92%), Query Frame = 1
Query: 847 SPPHELPQMGGRSGVLVSSLWRLCRRVGVLRHTRELSNGVWFDGKTGIRPIVDVVKAQPASKSRARGDPLPRPV-MVDRKSTRR**SMRPSPPSKAKMPWPPGHTIFVQQDGAKSHTKKGVMK--AIQTEAGTSIILETRPSNSPDLNVNDLGFFHSIQQLKEDVGVTTAEGLVEATHEAFNIHPRETLECVWHSLFAV*GEILGSKRDNSYKIPHSGKEQAERKGGTPKN 1530
+P E P ++ +S + +C V R + V FDGK GI P ++ V A+ SK+R G +P+ + ++ T+ + P AK P I +QQD AK H K + A + G ++ L +P NSPD NVNDLG+F +IQ L++ T + L+ A ++F+ +L+ V+ SL EI+ K N YKIPH GK R P+N
Sbjct: 185 APEEEEPHRSCKNKQFISKIMFMCA---VARPLFGGNGEVLFDGKIGIFPFIERVPAKRNSKNRRAGTIETKPIDSITKQVTKDCVINKIIPAIMAKWPEGASKQINIQQDNAKPHIKNEDVDFIAAANQNGFNMKLVQQPPNSPDTNVNDLGWFRAIQSLQQQTACNTLDDLLNAVEKSFHELSPISLDNVFMSLQGCMIEIMKCKGQNRYKIPHMGKNALRRSDQLPQN 412 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9816.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig9816.3.1 >prot_D-mesarthrocarpus_Contig9816.3.1 ID=prot_D-mesarthrocarpus_Contig9816.3.1|Name=mRNA_D-mesarthrocarpus_Contig9816.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=111bp MRPSPPSKAKMPWPPGHTIFVQQDGAKSHTKKGVMKAIQTEAGTSIILETback to top mRNA from alignment at D-mesarthrocarpus_Contig9816:2795..4635+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig9816.3.1 ID=mRNA_D-mesarthrocarpus_Contig9816.3.1|Name=mRNA_D-mesarthrocarpus_Contig9816.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1841bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9816:2795..4635+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9816:2795..4635+ >mRNA_D-mesarthrocarpus_Contig9816.3.1 ID=mRNA_D-mesarthrocarpus_Contig9816.3.1|Name=mRNA_D-mesarthrocarpus_Contig9816.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=333bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9816:2795..4635+ (Discosporangium mesarthrocarpum MT17_79)back to top |