mRNA_D-mesarthrocarpus_Contig98.14.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig98.14.1 vs. uniprot
Match: D8LJH7_ECTSI (Chromatin remodeling complex subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJH7_ECTSI) HSP 1 Score: 181 bits (459), Expect = 4.070e-44 Identity = 120/287 (41.81%), Postives = 149/287 (51.92%), Query Frame = 1
Query: 511 KQALLLSKEALR--QLPKVLCRSSETLLVARDFVEEWKALPSRKRGLLFGVPARAPLSLYLAGVTPKATGSKQRYTS----PQEMG----------------------------------LGVSSTRGMTAHPGQEICLACSKPA-SGQGKELRGRDRFCSKVCQEKFGVQTGK-ALRAAVYERDRGVC--EGCKRDTTRMVEELQATPSHLDRLHLLKTLDARF-ELRH-ELLNRLIHNPCAGNAWNADHVVAVFEGGGECGVDNLRTLCVLCHADVTKRQSRERA 1233
K+ALLLS P R++E VAR+FV+EW+AL SRKR LL G P R PL+ L+ VTP TGSK+RY P + G R + +CL C + A S QG + RDR+CS C E G +T +LR V+ERD GVC EGC RD +V L+A R +L D RF + RH L RL+ P G AWNADHV AV++GGGECGVDNLRTLCVLCH++VT+ Q+ ERA
Sbjct: 788 KEALLLSTATTTGPSTPASRRRAAEACEVAREFVQEWRALSSRKRPLLKGTPCRPPLADELSRVTPALTGSKRRYAGTVGGPSKSGGPAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARSGGIASDKVMCLYCDEEAASEQGPPVHRRDRYCSVDCMEAHGTRTSNTSLRRLVFERDHGVCSGEGCGRDCFALVSRLKAVQHRQKRRDILMGADPRFGDQRHLSLRERLVREPKGGYAWNADHVTAVYQGGGECGVDNLRTLCVLCHSEVTRVQTTERA 1074
BLAST of mRNA_D-mesarthrocarpus_Contig98.14.1 vs. uniprot
Match: A0A1Y1HVS3_KLENI (SNF2 domain containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HVS3_KLENI) HSP 1 Score: 135 bits (340), Expect = 4.200e-29 Identity = 92/258 (35.66%), Postives = 130/258 (50.39%), Query Frame = 1
Query: 550 LPKVLCRSSETLLVARDFVEEWKALPSRKRGLLFGVPARAPLSLYLAGVTPKATG------SKQRYTSPQEMGLGV---SSTRGMT---------------AHPGQEICLACSKPASGQGKELRGR--DRFCSKVCQEKFGVQTGKAL-RAAVYERDRGVCEGCKRDTTRMVEELQATPSHLDRLHLLKTLDARFELRHELLNRLIHNPCAGNAWNADHVVAVFEGGGECGVDNLRTLCVLCHADVTKRQSRERADAA 1242
LPK+L L AR F++EW L R L G+P +APL L L V ATG SK+R + E+G + +S RG+ G +C C K G+ + + D FCS C +++ +T A R ++E +RGVC C D +MV L+ + R +L+ A + + L+ L+ N GNAW+ADH+VAV+EGGGEC + NLRTLCV CH+ VT Q++ RA A
Sbjct: 1321 LPKLLLTCGAHLRAARQFLDEWTKLRPIFRSKLQGMPLKAPLELELEKVRGGATGGLRAGGSKKRVAARDEVGEPLPAGASMRGVEWRSIFGEPQKSNQGLDEDGNPLCKMCQKICRGRFAKFPKKMADLFCSPTCADQYSTRTSSAHNRRRLFELERGVCSMCNLDCHKMVTTLKGLSNEQRRKSILEMAPAFLDYP-KRLDYLLANFNEGNAWHADHIVAVYEGGGECDLKNLRTLCVPCHSKVTSLQTKRRASEA 1577
BLAST of mRNA_D-mesarthrocarpus_Contig98.14.1 vs. uniprot
Match: UPI000B8C7BFD (DNA annealing helicase and endonuclease ZRANB3 n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8C7BFD) HSP 1 Score: 129 bits (325), Expect = 9.820e-28 Identity = 82/244 (33.61%), Postives = 130/244 (53.28%), Query Frame = 1
Query: 598 DFVEEWKALPSRKRGLLFGVPARAPLSLYLAGVTPKAT---------GSKQRYTSPQEMGLGVSS--------------------TRGMTAHPGQEICLACSKPASGQG-KELRG-RDRFCSKVCQEKFGVQTGKA-LRAAVYERDRGVCEGCKRDTTRMVEELQATPSHLD-RLHLLKTLDARFELRHELLNRLIHNPCAGNAWNADHVVAVFEGGGECGVDNLRTLCVLCHADVTKRQSRER 1230
+FV EW L ++ LFG P + PLS+ L ++ + GSK+R T E+ L + S T+G T + +C C KP +G+ KE D FC+ C E++ ++T LR +++ + G+C C+ D ++V+ L+ P L+ RL ++ + + R LLN+L+++P GNAW+ADH++ V+ GGGEC ++N+RTLCV CH+DVT Q ER
Sbjct: 353 EFVNEWNKLRPIEQKKLFGKPLQLPLSVELCYLSENISHNKGGLLKGGSKRRSTPLYEISLPLPSDAVWKKVHIRSGHKKMEKEYTQGWTLKD-EPLCKLCQKPCTGRSAKEPEYFEDLFCNLGCFEEYRIRTSNGFLRQQLFQIEHGICTNCQLDCHQLVKRLK--PLLLEKRLKYIEQVAPKLASRKTLLNKLVNDPTEGNAWHADHIIPVYRGGGECMLENMRTLCVACHSDVTMAQRAER 593
BLAST of mRNA_D-mesarthrocarpus_Contig98.14.1 vs. uniprot
Match: F4K856_ARATH (SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein n=11 Tax=Arabidopsis TaxID=3701 RepID=F4K856_ARATH) HSP 1 Score: 130 bits (326), Expect = 1.730e-27 Identity = 84/248 (33.87%), Postives = 128/248 (51.61%), Query Frame = 1
Query: 583 LLVARDFVEEWKAL-PSRKRGLLFGVPARAPLSLYLAGVTPKAT---------GSKQRYTSPQEMGLGVSSTRGM------TAHPGQE-------------ICLACSKPASG-QGKELRG-RDRFCSKVCQEKFGVQTG-KALRAAVYERDRGVCEGCKRDTTRMVEELQATPSHLDRLHLLKTLDARFELRHELLNRLIHNPCAGNAWNADHVVAVFEGGGECGVDNLRTLCVLCHADVTKRQSRER 1230
+L +F++EWK+L P KR LL G P + PLSL L+ ++ + GSK+R T E+ + + + H +E +C C KP +G KE D FC C E + +T + +R +++ + G+C CK D ++V+ L+ P R ++ K F R LL L+++P GNAW+ADH++ V++GGGEC ++N+RTLCV CHADVT Q ER
Sbjct: 882 VLAILEFMKEWKSLRPIEKRKLL-GKPLQLPLSLELSYLSESTSHNSEGLLRGGSKRRNTPFSEISIPLPENAVWIKVNLRSGHQRKEKEYTQAWSMSNEPLCKLCQKPCAGYNAKEPEYLEDLFCELACYEDYRTRTSSRYIRQELFQIEHGICTNCKLDCHQLVKRLRPLPLEKRRTYINKAAPELFA-RKNLLETLVNDPTEGNAWHADHIIPVYQGGGECRLENMRTLCVACHADVTAAQCAER 1127
BLAST of mRNA_D-mesarthrocarpus_Contig98.14.1 vs. uniprot
Match: UPI00053C336E (DNA annealing helicase and endonuclease ZRANB3 isoform X1 n=2 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C336E) HSP 1 Score: 129 bits (325), Expect = 2.310e-27 Identity = 81/245 (33.06%), Postives = 123/245 (50.20%), Query Frame = 1
Query: 598 DFVEEWKALPSRKRGLLFGVPARAPLSLYLAGVTPKAT---------GSKQRYTSPQEMGLGVSS--------------------TRGMTAHPGQEICLACSKPASG-QGKELRG-RDRFCSKVCQEKFGVQT-GKALRAAVYERDRGVCEGCKRDTTRMVEELQATPSHLDRLHLLKTLDARFELRHELLNRLIHNPCAGNAWNADHVVAVFEGGGECGVDNLRTLCVLCHADVTKRQSRERAD 1236
+FV+EW +L +R L G P + PLSL L+ ++ T GSK+R T E+ + T+ T + + +C C KP G KE D FC+ C E++ ++T G LR +++ + G+C CK D ++V +++ R +++K R LL L+ +P GNAW+ADH++ V+ GGGEC ++N+RTLCV CHADVT Q ER D
Sbjct: 895 EFVKEWNSLRPIERRKLLGKPLQLPLSLELSYLSESTTHNNEGLIRGGSKRRNTPLSEISFPLPPNAVWKKINLRSGCHKKEKEYTQAWTLND-EPLCKLCQKPCKGTNAKEPEYLEDLFCNLDCYEEYRIRTSGNYLRQELFQIEHGICTNCKLDCHQLVTKIKRLTVEKRRGYIIKVAP-NLAARKNLLETLVSDPTEGNAWHADHIIPVYRGGGECRLENMRTLCVACHADVTAAQCAERRD 1137
BLAST of mRNA_D-mesarthrocarpus_Contig98.14.1 vs. uniprot
Match: A0A1J3HBF6_NOCCA (DNA annealing helicase and endonuclease ZRANB3 (Fragment) n=3 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3HBF6_NOCCA) HSP 1 Score: 126 bits (317), Expect = 2.530e-27 Identity = 86/248 (34.68%), Postives = 123/248 (49.60%), Query Frame = 1
Query: 583 LLVARDFVEEWKAL-PSRKRGLLFGVPARAPLSLYLAGVTPKAT---------GSKQRYTSPQEMGLG---------VSSTRGMTAHP----------GQEICLACSKPASGQG-KELRG-RDRFCSKVCQEKFGVQTG-KALRAAVYERDRGVCEGCKRDTTRMVEELQATPSHLDRLHLLKTLDARFELRHELLNRLIHNPCAGNAWNADHVVAVFEGGGECGVDNLRTLCVLCHADVTKRQSRER 1230
LL +F++EW AL P KR LL G P + PLSL L+ ++ + GSK+R T E+ + V+ RG + +C C KP G KE D FC C E + +T + +R +++ + G+C CK D ++ L+ P R ++ K F R LL L+++P GNAW+ADH++ VF GGGEC ++N+RTLCV CHADVT Q ER
Sbjct: 186 LLAIIEFMKEWNALRPIEKRKLL-GKPLQLPLSLELSYLSENTSHNSEGLLKGGSKRRKTPFSEISIPLPQNAVWKKVNLRRGYQKKEKEYTQAWSVSNEPLCKLCQKPCKGNNAKEPEYFEDLFCDLACYEDYRTRTSSRFIRQELFQIEHGICTNCKLDCHQLATRLRPLPLERRREYVNKVAPELFA-RKNLLETLVNDPTEGNAWHADHIIPVFRGGGECRLENMRTLCVACHADVTAAQCVER 431
BLAST of mRNA_D-mesarthrocarpus_Contig98.14.1 vs. uniprot
Match: R0H883_9BRAS (Uncharacterized protein (Fragment) n=5 Tax=Camelineae TaxID=980083 RepID=R0H883_9BRAS) HSP 1 Score: 129 bits (324), Expect = 3.070e-27 Identity = 83/248 (33.47%), Postives = 129/248 (52.02%), Query Frame = 1
Query: 583 LLVARDFVEEWKAL-PSRKRGLLFGVPARAPLSLYLAGVTPKAT---------GSKQRYTSPQEMGLGVSSTRGM------TAHPGQE-------------ICLACSKPASGQG-KELRG-RDRFCSKVCQEKFGVQT-GKALRAAVYERDRGVCEGCKRDTTRMVEELQATPSHLDRLHLLKTLDARFELRHELLNRLIHNPCAGNAWNADHVVAVFEGGGECGVDNLRTLCVLCHADVTKRQSRER 1230
+L +F++EWK+L P KR LL G P + PLSL L+ ++ + GSK+R T ++ + + + + H +E +C C KP G KE D FC C E + ++T G+ +R +++ + G+C CK D ++V L+ P R ++ + F R LL L+++P GNAW+ADH++ V++GGGEC ++N+RTLCV CHADVT Q ER
Sbjct: 896 VLAILEFMKEWKSLRPIEKRKLL-GKPLQLPLSLELSYLSESGSHNSEGLLRGGSKRRNTPFSQISIPLPANAVWKKVNLRSGHQRKEKEYTQAWSMSNEPLCKLCQKPCKGNNAKEPEYFEDLFCDLACYEDYRIRTSGRYIRQELFQIEHGICTNCKLDCHQLVRRLRPLPLEKRRKYVNEVSPELFA-RKNLLETLVNDPTEGNAWHADHIIPVYQGGGECRLENMRTLCVACHADVTAAQCAER 1141
BLAST of mRNA_D-mesarthrocarpus_Contig98.14.1 vs. uniprot
Match: A0A0K9RZW7_SPIOL (HNH domain-containing protein (Fragment) n=1 Tax=Spinacia oleracea TaxID=3562 RepID=A0A0K9RZW7_SPIOL) HSP 1 Score: 123 bits (309), Expect = 1.450e-26 Identity = 75/237 (31.65%), Postives = 122/237 (51.48%), Query Frame = 1
Query: 598 DFVEEWKALPSRKRGLLFGVPARAPLSLYLAGVTPKAT---------GSKQRYTSPQEMGLGVSST-----------RGMT-------AHPGQEICLACSKPASG-QGKELRG-RDRFCSKVCQEKFGVQT-GKALRAAVYERDRGVCEGCKRDTTRMVEELQATPSHLDRLHLLKTLDARFELRHELLNRLIHNPCAGNAWNADHVVAVFEGGGECGVDNLRTLCVLCHADVTKRQ 1218
F+ EWK L ++ L G P + PL++ L ++ GSK+R+T E+ + S RG + +C C P K+ +G D +CS C E++ ++T G+ LR ++E + G+C C+ D ++V+ L+ S DR ++ + + R +++++L+ P GNAW+ADH++AVF GGGEC ++N+RTLCV CHADVT Q
Sbjct: 108 SFINEWKNLKLIEKRKLLGRPLQLPLAIELLRLSESNNHDSNGLLKGGSKRRHTPLCEISFPLRSNAVVKEVSLCDDRGNKKLYIQYWTLMDEPLCKLCQNPCQDINAKKPKGFSDLYCSNACYEEYRLRTSGRFLRQELFEIEHGICTNCQLDCHKLVQHLKPL-SVEDRGKYIERVAPQLSKRKKMMDKLVREPTEGNAWHADHIIAVFNGGGECRLENMRTLCVACHADVTASQ 343
BLAST of mRNA_D-mesarthrocarpus_Contig98.14.1 vs. uniprot
Match: A0A0P0X8K8_ORYSJ (Os07g0598300 protein n=18 Tax=Oryza TaxID=4527 RepID=A0A0P0X8K8_ORYSJ) HSP 1 Score: 127 bits (318), Expect = 1.630e-26 Identity = 89/269 (33.09%), Postives = 134/269 (49.81%), Query Frame = 1
Query: 523 LLSKEALRQLPKVLCRSSETLLVARDFVEEWKALPSRKRGLLFGVPARAPLSL---YLAGVTPKAT------GSKQRYTS--------PQE-------MGLGVSS----TRGMTAHPGQEICLACSKPASGQGKELRG--RDRFCSKVCQEKFGVQT-GKALRAAVYERDRGVCEGCKRDTTRMVEELQATPSHLDRLHLLKTLDARFELRHELLNRLIHNPCAGNAWNADHVVAVFEGGGECGVDNLRTLCVLCHADVTKRQSRERAD 1236
L S ++ ++L R + FV+EW AL ++ L G P + PLSL YL +T GSK+R T P+ + G S T+G T H + +C C P +G+ + D FC C E F +T G+ R A++E + G+C CK D +V+ ++ R ++ + R +LL++L+H P GNAW+ADH+V V++GGGEC ++NLRTLCV CH++VT Q +ER D
Sbjct: 858 LCSDNTMKTSNRLLKRDPAFCNTFKAFVKEWLALRPIEQKRLLGKPLQLPLSLELCYLKDTNNHSTKGLLKGGSKRRVTPWCDISNPLPENAEWRKVVLHNGTSREREYTQGWTVHD-EPLCKLCQGPCNGRLAKSPEYFEDLFCGLPCFEVFRSRTSGRFARQALFEIEHGICSKCKLDCHELVKNIRPLCKK-KREEYIRNVAPNIASRLKLLDKLVHEPNEGNAWHADHIVPVYKGGGECTLENLRTLCVACHSEVTCAQQKERKD 1124
BLAST of mRNA_D-mesarthrocarpus_Contig98.14.1 vs. uniprot
Match: A0A0E0EE15_9ORYZ (Helicase C-terminal domain-containing protein n=2 Tax=Oryza meridionalis TaxID=40149 RepID=A0A0E0EE15_9ORYZ) HSP 1 Score: 126 bits (317), Expect = 1.730e-26 Identity = 89/269 (33.09%), Postives = 135/269 (50.19%), Query Frame = 1
Query: 523 LLSKEALRQLPKVLCRSSETLLVARDFVEEWKALPSRKRGLLFGVPARAPLSL---YLAGVTPKAT------GSKQRYTS--------PQE-------MGLGVSS----TRGMTAHPGQEICLACSKPASGQGKELRG--RDRFCSKVCQEKFGVQT-GKALRAAVYERDRGVCEGCKRDTTRMVEELQATPSHLDRLHLLKTLDARFELRHELLNRLIHNPCAGNAWNADHVVAVFEGGGECGVDNLRTLCVLCHADVTKRQSRERAD 1236
L S A++ ++L R + FV+EW AL ++ L G P + PLSL YL +T GSK+R T P+ + G S T+G T H + +C C P +G+ + D FC C E F +T G+ R A++E + G+C CK D +V+ ++ R ++ + R +LL++L+H P GNAW+ADH+V V++GGGEC ++NLRTLCV CH++VT Q +ER +
Sbjct: 506 LCSDNAMKTSNRLLKRDPAFCNTFKAFVKEWLALRPIEQKRLLGKPLQLPLSLELCYLKDTNNHSTKGLLKGGSKRRVTPWCDISNPLPENAEWRKVVLHNGTSREREYTQGWTVHD-EPLCKLCQGPCNGRLAKSPEYFEDLFCGLPCFEVFRSRTSGRFARQALFEIEHGICSKCKLDCHELVKNIRPLCKK-KREEYIRNVVPNIASRLKLLDKLVHEPNEGNAWHADHIVPVYKGGGECTLENLRTLCVACHSEVTCAQQKERKE 772 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig98.14.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig98.14.1 >prot_D-mesarthrocarpus_Contig98.14.1 ID=prot_D-mesarthrocarpus_Contig98.14.1|Name=mRNA_D-mesarthrocarpus_Contig98.14.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=372bp MGLGVSSTRGMTAHPGQEICLACSKPASGQGKELRGRDRFCSKVCQEKFGback to top mRNA from alignment at D-mesarthrocarpus_Contig98:47568..52790- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig98.14.1 ID=mRNA_D-mesarthrocarpus_Contig98.14.1|Name=mRNA_D-mesarthrocarpus_Contig98.14.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=5223bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig98:47568..52790- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig98:47568..52790- >mRNA_D-mesarthrocarpus_Contig98.14.1 ID=mRNA_D-mesarthrocarpus_Contig98.14.1|Name=mRNA_D-mesarthrocarpus_Contig98.14.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1116bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig98:47568..52790- (Discosporangium mesarthrocarpum MT17_79)back to top |