mRNA_D-mesarthrocarpus_Contig98.14.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig98.14.1
Unique NamemRNA_D-mesarthrocarpus_Contig98.14.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig98.14.1 vs. uniprot
Match: D8LJH7_ECTSI (Chromatin remodeling complex subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJH7_ECTSI)

HSP 1 Score: 181 bits (459), Expect = 4.070e-44
Identity = 120/287 (41.81%), Postives = 149/287 (51.92%), Query Frame = 1
Query:  511 KQALLLSKEALR--QLPKVLCRSSETLLVARDFVEEWKALPSRKRGLLFGVPARAPLSLYLAGVTPKATGSKQRYTS----PQEMG----------------------------------LGVSSTRGMTAHPGQEICLACSKPA-SGQGKELRGRDRFCSKVCQEKFGVQTGK-ALRAAVYERDRGVC--EGCKRDTTRMVEELQATPSHLDRLHLLKTLDARF-ELRH-ELLNRLIHNPCAGNAWNADHVVAVFEGGGECGVDNLRTLCVLCHADVTKRQSRERA 1233
            K+ALLLS         P    R++E   VAR+FV+EW+AL SRKR LL G P R PL+  L+ VTP  TGSK+RY      P + G                                        R       + +CL C + A S QG  +  RDR+CS  C E  G +T   +LR  V+ERD GVC  EGC RD   +V  L+A      R  +L   D RF + RH  L  RL+  P  G AWNADHV AV++GGGECGVDNLRTLCVLCH++VT+ Q+ ERA
Sbjct:  788 KEALLLSTATTTGPSTPASRRRAAEACEVAREFVQEWRALSSRKRPLLKGTPCRPPLADELSRVTPALTGSKRRYAGTVGGPSKSGGPAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARSGGIASDKVMCLYCDEEAASEQGPPVHRRDRYCSVDCMEAHGTRTSNTSLRRLVFERDHGVCSGEGCGRDCFALVSRLKAVQHRQKRRDILMGADPRFGDQRHLSLRERLVREPKGGYAWNADHVTAVYQGGGECGVDNLRTLCVLCHSEVTRVQTTERA 1074          
BLAST of mRNA_D-mesarthrocarpus_Contig98.14.1 vs. uniprot
Match: A0A1Y1HVS3_KLENI (SNF2 domain containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HVS3_KLENI)

HSP 1 Score: 135 bits (340), Expect = 4.200e-29
Identity = 92/258 (35.66%), Postives = 130/258 (50.39%), Query Frame = 1
Query:  550 LPKVLCRSSETLLVARDFVEEWKALPSRKRGLLFGVPARAPLSLYLAGVTPKATG------SKQRYTSPQEMGLGV---SSTRGMT---------------AHPGQEICLACSKPASGQGKELRGR--DRFCSKVCQEKFGVQTGKAL-RAAVYERDRGVCEGCKRDTTRMVEELQATPSHLDRLHLLKTLDARFELRHELLNRLIHNPCAGNAWNADHVVAVFEGGGECGVDNLRTLCVLCHADVTKRQSRERADAA 1242
            LPK+L      L  AR F++EW  L    R  L G+P +APL L L  V   ATG      SK+R  +  E+G  +   +S RG+                   G  +C  C K   G+  +   +  D FCS  C +++  +T  A  R  ++E +RGVC  C  D  +MV  L+   +   R  +L+   A  +   + L+ L+ N   GNAW+ADH+VAV+EGGGEC + NLRTLCV CH+ VT  Q++ RA  A
Sbjct: 1321 LPKLLLTCGAHLRAARQFLDEWTKLRPIFRSKLQGMPLKAPLELELEKVRGGATGGLRAGGSKKRVAARDEVGEPLPAGASMRGVEWRSIFGEPQKSNQGLDEDGNPLCKMCQKICRGRFAKFPKKMADLFCSPTCADQYSTRTSSAHNRRRLFELERGVCSMCNLDCHKMVTTLKGLSNEQRRKSILEMAPAFLDYP-KRLDYLLANFNEGNAWHADHIVAVYEGGGECDLKNLRTLCVPCHSKVTSLQTKRRASEA 1577          
BLAST of mRNA_D-mesarthrocarpus_Contig98.14.1 vs. uniprot
Match: UPI000B8C7BFD (DNA annealing helicase and endonuclease ZRANB3 n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8C7BFD)

HSP 1 Score: 129 bits (325), Expect = 9.820e-28
Identity = 82/244 (33.61%), Postives = 130/244 (53.28%), Query Frame = 1
Query:  598 DFVEEWKALPSRKRGLLFGVPARAPLSLYLAGVTPKAT---------GSKQRYTSPQEMGLGVSS--------------------TRGMTAHPGQEICLACSKPASGQG-KELRG-RDRFCSKVCQEKFGVQTGKA-LRAAVYERDRGVCEGCKRDTTRMVEELQATPSHLD-RLHLLKTLDARFELRHELLNRLIHNPCAGNAWNADHVVAVFEGGGECGVDNLRTLCVLCHADVTKRQSRER 1230
            +FV EW  L   ++  LFG P + PLS+ L  ++   +         GSK+R T   E+ L + S                    T+G T    + +C  C KP +G+  KE     D FC+  C E++ ++T    LR  +++ + G+C  C+ D  ++V+ L+  P  L+ RL  ++ +  +   R  LLN+L+++P  GNAW+ADH++ V+ GGGEC ++N+RTLCV CH+DVT  Q  ER
Sbjct:  353 EFVNEWNKLRPIEQKKLFGKPLQLPLSVELCYLSENISHNKGGLLKGGSKRRSTPLYEISLPLPSDAVWKKVHIRSGHKKMEKEYTQGWTLKD-EPLCKLCQKPCTGRSAKEPEYFEDLFCNLGCFEEYRIRTSNGFLRQQLFQIEHGICTNCQLDCHQLVKRLK--PLLLEKRLKYIEQVAPKLASRKTLLNKLVNDPTEGNAWHADHIIPVYRGGGECMLENMRTLCVACHSDVTMAQRAER 593          
BLAST of mRNA_D-mesarthrocarpus_Contig98.14.1 vs. uniprot
Match: F4K856_ARATH (SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein n=11 Tax=Arabidopsis TaxID=3701 RepID=F4K856_ARATH)

HSP 1 Score: 130 bits (326), Expect = 1.730e-27
Identity = 84/248 (33.87%), Postives = 128/248 (51.61%), Query Frame = 1
Query:  583 LLVARDFVEEWKAL-PSRKRGLLFGVPARAPLSLYLAGVTPKAT---------GSKQRYTSPQEMGLGVSSTRGM------TAHPGQE-------------ICLACSKPASG-QGKELRG-RDRFCSKVCQEKFGVQTG-KALRAAVYERDRGVCEGCKRDTTRMVEELQATPSHLDRLHLLKTLDARFELRHELLNRLIHNPCAGNAWNADHVVAVFEGGGECGVDNLRTLCVLCHADVTKRQSRER 1230
            +L   +F++EWK+L P  KR LL G P + PLSL L+ ++   +         GSK+R T   E+ + +            + H  +E             +C  C KP +G   KE     D FC   C E +  +T  + +R  +++ + G+C  CK D  ++V+ L+  P    R ++ K     F  R  LL  L+++P  GNAW+ADH++ V++GGGEC ++N+RTLCV CHADVT  Q  ER
Sbjct:  882 VLAILEFMKEWKSLRPIEKRKLL-GKPLQLPLSLELSYLSESTSHNSEGLLRGGSKRRNTPFSEISIPLPENAVWIKVNLRSGHQRKEKEYTQAWSMSNEPLCKLCQKPCAGYNAKEPEYLEDLFCELACYEDYRTRTSSRYIRQELFQIEHGICTNCKLDCHQLVKRLRPLPLEKRRTYINKAAPELFA-RKNLLETLVNDPTEGNAWHADHIIPVYQGGGECRLENMRTLCVACHADVTAAQCAER 1127          
BLAST of mRNA_D-mesarthrocarpus_Contig98.14.1 vs. uniprot
Match: UPI00053C336E (DNA annealing helicase and endonuclease ZRANB3 isoform X1 n=2 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C336E)

HSP 1 Score: 129 bits (325), Expect = 2.310e-27
Identity = 81/245 (33.06%), Postives = 123/245 (50.20%), Query Frame = 1
Query:  598 DFVEEWKALPSRKRGLLFGVPARAPLSLYLAGVTPKAT---------GSKQRYTSPQEMGLGVSS--------------------TRGMTAHPGQEICLACSKPASG-QGKELRG-RDRFCSKVCQEKFGVQT-GKALRAAVYERDRGVCEGCKRDTTRMVEELQATPSHLDRLHLLKTLDARFELRHELLNRLIHNPCAGNAWNADHVVAVFEGGGECGVDNLRTLCVLCHADVTKRQSRERAD 1236
            +FV+EW +L   +R  L G P + PLSL L+ ++   T         GSK+R T   E+   +                      T+  T +  + +C  C KP  G   KE     D FC+  C E++ ++T G  LR  +++ + G+C  CK D  ++V +++       R +++K        R  LL  L+ +P  GNAW+ADH++ V+ GGGEC ++N+RTLCV CHADVT  Q  ER D
Sbjct:  895 EFVKEWNSLRPIERRKLLGKPLQLPLSLELSYLSESTTHNNEGLIRGGSKRRNTPLSEISFPLPPNAVWKKINLRSGCHKKEKEYTQAWTLND-EPLCKLCQKPCKGTNAKEPEYLEDLFCNLDCYEEYRIRTSGNYLRQELFQIEHGICTNCKLDCHQLVTKIKRLTVEKRRGYIIKVAP-NLAARKNLLETLVSDPTEGNAWHADHIIPVYRGGGECRLENMRTLCVACHADVTAAQCAERRD 1137          
BLAST of mRNA_D-mesarthrocarpus_Contig98.14.1 vs. uniprot
Match: A0A1J3HBF6_NOCCA (DNA annealing helicase and endonuclease ZRANB3 (Fragment) n=3 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3HBF6_NOCCA)

HSP 1 Score: 126 bits (317), Expect = 2.530e-27
Identity = 86/248 (34.68%), Postives = 123/248 (49.60%), Query Frame = 1
Query:  583 LLVARDFVEEWKAL-PSRKRGLLFGVPARAPLSLYLAGVTPKAT---------GSKQRYTSPQEMGLG---------VSSTRGMTAHP----------GQEICLACSKPASGQG-KELRG-RDRFCSKVCQEKFGVQTG-KALRAAVYERDRGVCEGCKRDTTRMVEELQATPSHLDRLHLLKTLDARFELRHELLNRLIHNPCAGNAWNADHVVAVFEGGGECGVDNLRTLCVLCHADVTKRQSRER 1230
            LL   +F++EW AL P  KR LL G P + PLSL L+ ++   +         GSK+R T   E+ +          V+  RG                + +C  C KP  G   KE     D FC   C E +  +T  + +R  +++ + G+C  CK D  ++   L+  P    R ++ K     F  R  LL  L+++P  GNAW+ADH++ VF GGGEC ++N+RTLCV CHADVT  Q  ER
Sbjct:  186 LLAIIEFMKEWNALRPIEKRKLL-GKPLQLPLSLELSYLSENTSHNSEGLLKGGSKRRKTPFSEISIPLPQNAVWKKVNLRRGYQKKEKEYTQAWSVSNEPLCKLCQKPCKGNNAKEPEYFEDLFCDLACYEDYRTRTSSRFIRQELFQIEHGICTNCKLDCHQLATRLRPLPLERRREYVNKVAPELFA-RKNLLETLVNDPTEGNAWHADHIIPVFRGGGECRLENMRTLCVACHADVTAAQCVER 431          
BLAST of mRNA_D-mesarthrocarpus_Contig98.14.1 vs. uniprot
Match: R0H883_9BRAS (Uncharacterized protein (Fragment) n=5 Tax=Camelineae TaxID=980083 RepID=R0H883_9BRAS)

HSP 1 Score: 129 bits (324), Expect = 3.070e-27
Identity = 83/248 (33.47%), Postives = 129/248 (52.02%), Query Frame = 1
Query:  583 LLVARDFVEEWKAL-PSRKRGLLFGVPARAPLSLYLAGVTPKAT---------GSKQRYTSPQEMGLGVSSTRGM------TAHPGQE-------------ICLACSKPASGQG-KELRG-RDRFCSKVCQEKFGVQT-GKALRAAVYERDRGVCEGCKRDTTRMVEELQATPSHLDRLHLLKTLDARFELRHELLNRLIHNPCAGNAWNADHVVAVFEGGGECGVDNLRTLCVLCHADVTKRQSRER 1230
            +L   +F++EWK+L P  KR LL G P + PLSL L+ ++   +         GSK+R T   ++ + + +          + H  +E             +C  C KP  G   KE     D FC   C E + ++T G+ +R  +++ + G+C  CK D  ++V  L+  P    R ++ +     F  R  LL  L+++P  GNAW+ADH++ V++GGGEC ++N+RTLCV CHADVT  Q  ER
Sbjct:  896 VLAILEFMKEWKSLRPIEKRKLL-GKPLQLPLSLELSYLSESGSHNSEGLLRGGSKRRNTPFSQISIPLPANAVWKKVNLRSGHQRKEKEYTQAWSMSNEPLCKLCQKPCKGNNAKEPEYFEDLFCDLACYEDYRIRTSGRYIRQELFQIEHGICTNCKLDCHQLVRRLRPLPLEKRRKYVNEVSPELFA-RKNLLETLVNDPTEGNAWHADHIIPVYQGGGECRLENMRTLCVACHADVTAAQCAER 1141          
BLAST of mRNA_D-mesarthrocarpus_Contig98.14.1 vs. uniprot
Match: A0A0K9RZW7_SPIOL (HNH domain-containing protein (Fragment) n=1 Tax=Spinacia oleracea TaxID=3562 RepID=A0A0K9RZW7_SPIOL)

HSP 1 Score: 123 bits (309), Expect = 1.450e-26
Identity = 75/237 (31.65%), Postives = 122/237 (51.48%), Query Frame = 1
Query:  598 DFVEEWKALPSRKRGLLFGVPARAPLSLYLAGVTPKAT---------GSKQRYTSPQEMGLGVSST-----------RGMT-------AHPGQEICLACSKPASG-QGKELRG-RDRFCSKVCQEKFGVQT-GKALRAAVYERDRGVCEGCKRDTTRMVEELQATPSHLDRLHLLKTLDARFELRHELLNRLIHNPCAGNAWNADHVVAVFEGGGECGVDNLRTLCVLCHADVTKRQ 1218
             F+ EWK L   ++  L G P + PL++ L  ++             GSK+R+T   E+   + S            RG             + +C  C  P      K+ +G  D +CS  C E++ ++T G+ LR  ++E + G+C  C+ D  ++V+ L+   S  DR   ++ +  +   R +++++L+  P  GNAW+ADH++AVF GGGEC ++N+RTLCV CHADVT  Q
Sbjct:  108 SFINEWKNLKLIEKRKLLGRPLQLPLAIELLRLSESNNHDSNGLLKGGSKRRHTPLCEISFPLRSNAVVKEVSLCDDRGNKKLYIQYWTLMDEPLCKLCQNPCQDINAKKPKGFSDLYCSNACYEEYRLRTSGRFLRQELFEIEHGICTNCQLDCHKLVQHLKPL-SVEDRGKYIERVAPQLSKRKKMMDKLVREPTEGNAWHADHIIAVFNGGGECRLENMRTLCVACHADVTASQ 343          
BLAST of mRNA_D-mesarthrocarpus_Contig98.14.1 vs. uniprot
Match: A0A0P0X8K8_ORYSJ (Os07g0598300 protein n=18 Tax=Oryza TaxID=4527 RepID=A0A0P0X8K8_ORYSJ)

HSP 1 Score: 127 bits (318), Expect = 1.630e-26
Identity = 89/269 (33.09%), Postives = 134/269 (49.81%), Query Frame = 1
Query:  523 LLSKEALRQLPKVLCRSSETLLVARDFVEEWKALPSRKRGLLFGVPARAPLSL---YLAGVTPKAT------GSKQRYTS--------PQE-------MGLGVSS----TRGMTAHPGQEICLACSKPASGQGKELRG--RDRFCSKVCQEKFGVQT-GKALRAAVYERDRGVCEGCKRDTTRMVEELQATPSHLDRLHLLKTLDARFELRHELLNRLIHNPCAGNAWNADHVVAVFEGGGECGVDNLRTLCVLCHADVTKRQSRERAD 1236
            L S   ++   ++L R        + FV+EW AL   ++  L G P + PLSL   YL      +T      GSK+R T         P+        +  G S     T+G T H  + +C  C  P +G+  +      D FC   C E F  +T G+  R A++E + G+C  CK D   +V+ ++       R   ++ +      R +LL++L+H P  GNAW+ADH+V V++GGGEC ++NLRTLCV CH++VT  Q +ER D
Sbjct:  858 LCSDNTMKTSNRLLKRDPAFCNTFKAFVKEWLALRPIEQKRLLGKPLQLPLSLELCYLKDTNNHSTKGLLKGGSKRRVTPWCDISNPLPENAEWRKVVLHNGTSREREYTQGWTVHD-EPLCKLCQGPCNGRLAKSPEYFEDLFCGLPCFEVFRSRTSGRFARQALFEIEHGICSKCKLDCHELVKNIRPLCKK-KREEYIRNVAPNIASRLKLLDKLVHEPNEGNAWHADHIVPVYKGGGECTLENLRTLCVACHSEVTCAQQKERKD 1124          
BLAST of mRNA_D-mesarthrocarpus_Contig98.14.1 vs. uniprot
Match: A0A0E0EE15_9ORYZ (Helicase C-terminal domain-containing protein n=2 Tax=Oryza meridionalis TaxID=40149 RepID=A0A0E0EE15_9ORYZ)

HSP 1 Score: 126 bits (317), Expect = 1.730e-26
Identity = 89/269 (33.09%), Postives = 135/269 (50.19%), Query Frame = 1
Query:  523 LLSKEALRQLPKVLCRSSETLLVARDFVEEWKALPSRKRGLLFGVPARAPLSL---YLAGVTPKAT------GSKQRYTS--------PQE-------MGLGVSS----TRGMTAHPGQEICLACSKPASGQGKELRG--RDRFCSKVCQEKFGVQT-GKALRAAVYERDRGVCEGCKRDTTRMVEELQATPSHLDRLHLLKTLDARFELRHELLNRLIHNPCAGNAWNADHVVAVFEGGGECGVDNLRTLCVLCHADVTKRQSRERAD 1236
            L S  A++   ++L R        + FV+EW AL   ++  L G P + PLSL   YL      +T      GSK+R T         P+        +  G S     T+G T H  + +C  C  P +G+  +      D FC   C E F  +T G+  R A++E + G+C  CK D   +V+ ++       R   ++ +      R +LL++L+H P  GNAW+ADH+V V++GGGEC ++NLRTLCV CH++VT  Q +ER +
Sbjct:  506 LCSDNAMKTSNRLLKRDPAFCNTFKAFVKEWLALRPIEQKRLLGKPLQLPLSLELCYLKDTNNHSTKGLLKGGSKRRVTPWCDISNPLPENAEWRKVVLHNGTSREREYTQGWTVHD-EPLCKLCQGPCNGRLAKSPEYFEDLFCGLPCFEVFRSRTSGRFARQALFEIEHGICSKCKLDCHELVKNIRPLCKK-KREEYIRNVVPNIASRLKLLDKLVHEPNEGNAWHADHIVPVYKGGGECTLENLRTLCVACHSEVTCAQQKERKE 772          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig98.14.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJH7_ECTSI4.070e-4441.81Chromatin remodeling complex subunit n=1 Tax=Ectoc... [more]
A0A1Y1HVS3_KLENI4.200e-2935.66SNF2 domain containing protein n=1 Tax=Klebsormidi... [more]
UPI000B8C7BFD9.820e-2833.61DNA annealing helicase and endonuclease ZRANB3 n=1... [more]
F4K856_ARATH1.730e-2733.87SNF2 domain-containing protein / helicase domain-c... [more]
UPI00053C336E2.310e-2733.06DNA annealing helicase and endonuclease ZRANB3 iso... [more]
A0A1J3HBF6_NOCCA2.530e-2734.68DNA annealing helicase and endonuclease ZRANB3 (Fr... [more]
R0H883_9BRAS3.070e-2733.47Uncharacterized protein (Fragment) n=5 Tax=Camelin... [more]
A0A0K9RZW7_SPIOL1.450e-2631.65HNH domain-containing protein (Fragment) n=1 Tax=S... [more]
A0A0P0X8K8_ORYSJ1.630e-2633.09Os07g0598300 protein n=18 Tax=Oryza TaxID=4527 Rep... [more]
A0A0E0EE15_9ORYZ1.730e-2633.09Helicase C-terminal domain-containing protein n=2 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig98contigD-mesarthrocarpus_Contig98:47568..52790 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LJH7
PFAMsHNH,Helicase_C,SNF2_N
Model size1985
Max annot lvl2759|Eukaryota
KEGG koko:K10876,ko:K14440
Hectar predicted targeting categoryother localisation
GOsGO:0000018,GO:0000228,GO:0000733,GO:0003674,GO:0003676,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005657,GO:0005694,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006275,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008150,GO:0008152,GO:0008156,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010556,GO:0010558,GO:0010605,GO:0016043,GO:0016462,GO:0016787,GO:0016788,GO:0016817,GO:0016818,GO:0017111,GO:0019219,GO:0019222,GO:0031297,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031593,GO:0031974,GO:0031981,GO:0032392,GO:0033554,GO:0034641,GO:0034645,GO:0036292,GO:0036310,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043596,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0045005,GO:0045910,GO:0045934,GO:0046483,GO:0048478,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051276,GO:0051716,GO:0060255,GO:0065007,GO:0070013,GO:0070530,GO:0071103,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0090305,GO:0090329,GO:0097159,GO:0097617,GO:0140030,GO:0140097,GO:1901360,GO:1901363,GO:1901576,GO:2000104,GO:2000112,GO:2000113
Exons8
Evalue4.21e-34
EggNOG OGsCOG0553@1|root,KOG1000@2759|Eukaryota
EC3.6.4.12
Descriptionannealing helicase activity
Cds size1116
COG categoryL
BRITEko00000,ko01000,ko03036,ko03400
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig98.14.1prot_D-mesarthrocarpus_Contig98.14.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig98 47693..51294 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791131.561516-UTR-D-mesarthrocarpus_Contig98:47567..476921680791131.561516-UTR-D-mesarthrocarpus_Contig98:47567..47692Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig98 47568..47692 -
1680791131.6586473-UTR-D-mesarthrocarpus_Contig98:51294..513221680791131.6586473-UTR-D-mesarthrocarpus_Contig98:51294..51322Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig98 51295..51322 -
1680791131.6714728-UTR-D-mesarthrocarpus_Contig98:51823..519511680791131.6714728-UTR-D-mesarthrocarpus_Contig98:51823..51951Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig98 51824..51951 -
1680791131.688755-UTR-D-mesarthrocarpus_Contig98:52202..527901680791131.688755-UTR-D-mesarthrocarpus_Contig98:52202..52790Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig98 52203..52790 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791131.5770345-CDS-D-mesarthrocarpus_Contig98:47692..483021680791131.5770345-CDS-D-mesarthrocarpus_Contig98:47692..48302Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig98 47693..48302 -
1680791131.5973668-CDS-D-mesarthrocarpus_Contig98:48615..487221680791131.5973668-CDS-D-mesarthrocarpus_Contig98:48615..48722Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig98 48616..48722 -
1680791131.608315-CDS-D-mesarthrocarpus_Contig98:49044..491731680791131.608315-CDS-D-mesarthrocarpus_Contig98:49044..49173Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig98 49045..49173 -
1680791131.6192946-CDS-D-mesarthrocarpus_Contig98:50179..503081680791131.6192946-CDS-D-mesarthrocarpus_Contig98:50179..50308Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig98 50180..50308 -
1680791131.6356907-CDS-D-mesarthrocarpus_Contig98:50612..507021680791131.6356907-CDS-D-mesarthrocarpus_Contig98:50612..50702Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig98 50613..50702 -
1680791131.6476212-CDS-D-mesarthrocarpus_Contig98:51243..512941680791131.6476212-CDS-D-mesarthrocarpus_Contig98:51243..51294Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig98 51244..51294 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig98.14.1

>prot_D-mesarthrocarpus_Contig98.14.1 ID=prot_D-mesarthrocarpus_Contig98.14.1|Name=mRNA_D-mesarthrocarpus_Contig98.14.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=372bp
MGLGVSSTRGMTAHPGQEICLACSKPASGQGKELRGRDRFCSKVCQEKFG
VQTGKALRAAVYERDRGVCEGCKRDTTRMVEELQATPSHLDRLHLLKTLD
ARFELRHELLNRLIHNPCAGNAWNADHVVAVFEGGGECGVDNLRTLCVLC
HADVTKRQSRERADAALHRLSEGRGEGNSSGTNKSTEGTHIDRSFCQYGE
IWSDGALGGVLDEGCERRCNTGTDQQQPAATGKRSRESSPLTVGSMTSMT
STYNPPTPSPARCQHTRTTAPWPPVDYESDEDKEDGDEYANCVGGSFHQI
VPDVDVCSLLSRTTFHKTTESGKCFRRSICSPSDPSSSDCVLIGGGISFS
RVKRSTNISFNAGIPDMNTQE*
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mRNA from alignment at D-mesarthrocarpus_Contig98:47568..52790-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig98.14.1 ID=mRNA_D-mesarthrocarpus_Contig98.14.1|Name=mRNA_D-mesarthrocarpus_Contig98.14.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=5223bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig98:47568..52790- (Discosporangium mesarthrocarpum MT17_79)
CCTGAGCAAGGCGGAGGAGAGATTATTATAATCAGGTTTAGCTGAGAAGA GCGTTGTCTCTTCAGGAAGAAACAGGTATGGCTGTGATCTGAATTGAATC TGTTCTTGTGTCTGATATTTGGCACAAAGGGTTAGTTCAAATGTGTGGCT GAGTACAGAAAGGGCAGATGATACACTTTGAAAGGGTTAGGGTTAGGGTT TGAGAGGGTTAAACACGAAATGAAATGACTCTTTGACACTGTAACAAGGC AGTCTACAATACTCAACAATGCTTGTTGGCAAATCTATCATGTTTTGTAC TGCCCCGACAGGGCTTCTACATATCTGTAGGAAAATCCCTTACTATCTCA AAACTTAAAAAAAAACACAGCTCTGATCTGTACGGAAATGAGTCATGAAT AGGAAATCGAGAAAACACCCCCGTGGTCAGTGTGCCAGGGCATTGCAAGG ACACAGCTTAATGATCGTTCTGTGCATAATCCTGCACCTTGACAGGGGGG GAGATTGCATAAGCAGGCTCTGCTGCTGTCTAAGGAAGCACTGCGACAGC TCCCCAAAGTTTTGTGTCGATCATCAGAGACGCTGCTGGTATGTTTTTCT ACCTAGATGCCCTAATCTTCCATGCTGCAGAACTACTGCAGGTGCTTCAC CTTACAATGCCTTCATATTTAATGTATGGAACCTACAGATATGCAGACGC TTCAAATACTTTTCAAGTCTTGGTCCGCAGTAGCGAGGGTCGTTGACTTG TTTGGGTGCTGTATGAACTTGCGCTGCATTCTTTCACAGCCTGTCTGTGT ATTTTCTTTCCACTGTAATTTTTTTTTCTATCCACAAAGGTGGCCAGGGA TTTTGTGGAAGAGTGGAAGGCATTGCCATCTCGGAAACGGGGTCTGCTTT TTGGTGTGCCTGCAAGGGCCCCATTGTCGTTGTACCTGGCTGGTGTTACT CCGAAAGCCACCGGAAGGTTAGATAAAAAAGAAAGGTTAGATTAAAAAAA AATAGGTTAGATAAAAAAAAAACACTAGGTAAAACCATGTGAAGCAAGAA GGGAAGTGTTTGACCAATATTCTCATGAGTATCTCAACACTCGTTTTCTT TTTTGTTTTTAACAGATTGGCCAACATGATAAATGACAAACATGCTACAC TACAAAATAATTTGATGTACTGGATGTTGAAATATGCTAATGACTGTTCA TTACAGTTAGGGTTAGGGTTGCGAGGGCATTTAGTATTGTACCTAGTACT TCAAATGCTGTGTGCTTGTGGTATAGGCCATGATCATCTACTTTTTCTCT GGAACAGTGTTCCTGGCAGATACTTTTGGATGCAGTGGGTATTATCCAGA TTATTCCTTGTATATCCCCTTGAGTGGTTGGAATGTGCAGTGCTGACAAG GAGTGAACCTGATCATGGTGTGGCAGAACTGATTGTGTATTTGTTCATTC CTGTTCCAACTTTGGCAGCAAACAGAGATACACATCCCCACAAGAAATGG GCTTAGGGGTCTCCTCAACCAGGGGGATGACTGCACATCCAGGACAGGTT CACCACACCTCGTGTGCAGTTCTGGATGAGTTTCGCATGCACCAGAGGGT TTAGGGTTAGGGTTAGATTTCCTGTTTCTCACACTCTAGTACTTCTCTTG TGTTTTTTGCTGTGCTTCAGATTTTCACCGTAGGAAACTGTTTGGGATGG ATGTTAGTAGTTACTCCAGATAGTAGATCAACAGCTTTGTGTGCTGTCTT ACTGCAGCCATAGATCTCTGGGTGGTGATTTTGTGATTGACTAATTTCCT GCCCCGTTGCCAATAGGAACACACCTGAGAGCGGATATCGAATGCTTGCA TGGCTCAATTTTTGGAGACTTGTTTTCCATGCTTCCTATTTGATGTTCGG AATTGGCCTGTCAAAGTATACTGCCTAATTGGAGTAGATATCTGCTGGTG AATGTATGTTCTGCTTTCCCCCCTGGAACAAGTCTGAAGGAGTTATGTGT GCATCAGGAATCGGACAGCACTTTTGTTTTTTCTTTGGTTTCCATATATT TTCTGAGTTTCCATGTGTTGCGTCTGATGCATGCCCAGGAAATATGCCTT GCATGTTCCAAGCCTGCCAGTGGACAAGGGAAGGAACTCCGTGGCCGAGA CCGCTTCTGCAGCAAGGTCTGCCAGGAGGTCAGTCAGGTTTTGTGGTGGT CGTTTCAGATGTGTTTTTAAACCATGTTTGGTTCGGCTTCAAACTCAGTA CACGAGCCATATCGAAGCTCAGGTGTGGGATGGAAATAACTGGGTTGGGA ATTAGACAACACTTTAATCCTCCCCACTTGGACATACGATTACAAATGAC TGCTTAGTTCTCCATGAAGTCTCTCACCATGTCTGTCTCAAGCCCGGATG ATCCCCGTGGCATTGGGTGGTTGGAACCTGCTGTCTGCTCATGCACCCCT TCATGTGTGTGTTCTGCTCTTTGATTTTGTAGAAGTTTGGTGTACAGACA GGGAAGGCTCTGCGTGCTGCAGTTTATGAGAGAGACCGAGGTGTATGTGA AGGTTGCAAGAGAGATACCACAAGAATGGTTGAGGAGCTGCAGGCAACTC CCTCCCATTTGGTGAGTACCCCTTGCCAAGAATACTGATTTATGACAGGA TATTCGATCTTTGTTTTACGAAATAGGGAAAGAAAAAGATCTTCCCCACG GGCTCAAGTTTGACAGGAGTACACATCTTTTCAGTTTGCAACAGCCCCTC CAAGTTTAGAGCTTCACTTTGAGAAAGGAGAGCAGATGAACCGGTACGGA AAATCGGTTCCTTGGGTATTTATGATAGCTTCAATATCGTGTTGGGCTTG GGTTTTTTTTTGCAGAGCGCTGGTAGGCAATGGATGCTTGGGGGCTTGGC TCTCTTGAACAGGAACTTCAAGAAAGCACTCTGCTTGTAGAGAGTACAGT GAATGACACTGGTAAAATCATCTATCAGAAGTATTTCTTGGGCATCGTCT TGGATTATTGTGTCAAGAACATGTGCTGCCATTCAATGTCATGTTGATCT GTGCTACAATAACCCAGCATATACCTCTTTTTTCTCATGTTTCCGGTGTG AAAGCCACTATATCAAAGCAAGGTTTTCTTTTTTGTTTACAAGTGGAAGG CGGGTCCACCTGGGATTGTCATTTGCCGTAGTTTTCATGTGCAATTGTAC CACTTGTGGACTTTAAGAGATACCATGCATCAACATAGCCAGGGAATACC GTGATATCATAAACACATGTCAGTAGTTGAGGAAAACTCCCAAATAGGTT ATGCCCATGGTGTGAATCTTTGGGGTGAATCTCCATGTAAAGCAAGAGCT ACTCAAACAGTTCTTGCAGAACCATAAAATGAAATTATTAATTATGACAG CCCTCACCAAACAATGTATGCCTCAAGCAGTTTGGCTTCATATTTGGAAG CCCAGCGCTTTAGTAGAAAGTCTAGACTTTGTACTCCATTCACGTTCCCC TTTTGAGTTTTTAAACACAACACCATCACTACACGTCGAACTTTTCCTAT CTATGCGCGGTCTGAGTTGGGACAGTCAGTCATGTTTTTCTGTGTTTAAT GTTCCATTTCTCTGCAGGATAGGCTTCACTTGCTGAAGACTCTGGATGCT CGATTTGAGCTGCGCCACGAGCTGCTGAACCGCTTGATCCACAACCCATG TGCTGGGAATGCCTGGAATGCTGACCATGTCGTTGCAGTATTTGAGGTGC GCACGGGTCAGGGTTAGGGTTGTTGCAGAGTCTTCCACGCACTGGTGTTC CATGGGCCATCAGCCAAAAAAATATTCCTCACCCTAACCCCAACCCTAAC CCTAACCCTAACCCTTGACTGCCATCAGGGAACACATCCCTAACACTAAC ACTACACTAGTATATGGGCCTCTTCCATATAATACTCCCCACATTTTGAA AGCTCTATACTTGCACTTGGCCTGTCCTATCCACTTTCCCCTCCTATTCC CGCATCTCTGAAATTTGCATTGCTTTGACAACATTGTCGTCACTGGAATG GCGTATTTTCTGCCGAAGGGCGGTGGTGAGTGTGGCGTGGATAACCTGCG GACCCTCTGCGTACTGTGCCACGCTGATGTTACCAAGCGCCAGTCAAGGG AGCGGGCAGATGCTGCACTGCACAGGTGACATTGCATGATGTGTTAAAGT TTTGACACCCTAACACCTGTACTGCCAACAAAGTTTGAAGACTGCGCCAA TGGATTGTTGACTTTTTTCCAGGCTATCAAAACTGAGGGTTGGGGTTACG TTTAGGGTTAGGGTTAGCAGGTTTCACTGAATAGAAATCTGGAATAGAAA TTGCACAAAGTATATATAACAGAGCTTGATGTTAGGGCTTGGGTTGGGTT GGGTATATTTTAAAGTCTTACCGATAACCAACCAGCAGCATTCAATGCGG AATGCATGTTTGCCCATTGGGATGGCCCTCTTATCCAGGTTATCAGAAGG GAGGGGTGAGGGGAACAGTAGTGGCACCAACAAATCTACGGAGGGAACTC ACATTGATCGTTCTTTTTGTCAGTATGGGGAGATATGGTCAGATGGTGCT TTAGGAGGCGTGTTGGATGAGGGTTGTGAACGACGGTGCAACACTGGGAC AGATCAACAACAACCGGCGGCTACTGGCAAGAGAAGTAGGGAATCATCAC CACTAACAGTTGGTAGCATGACATCCATGACATCTACATACAACCCACCC ACACCAAGCCCAGCGCGGTGTCAGCATACCAGAACCACTGCCCCATGGCC GCCTGTTGACTATGAATCTGATGAGGATAAGGAGGACGGGGATGAGTACG CAAATTGTGTAGGTGGCTCCTTCCACCAGATTGTACCTGATGTAGACGTG TGTTCCTTGCTCTCCCGGACAACATTCCACAAAACCACTGAGAGTGGTAA GTGCTTTCGGAGGTCCATTTGTTCACCAAGTGACCCCTCATCTTCCGACT GTGTGTTGATAGGTGGGGGTATTAGTTTCTCCAGGGTAAAGCGCTCGACC AACATATCATTCAATGCGGGAATACCTGACATGAATACACAAGAGTAATC AGTTATTTTGCTGATGCATTGCACTGTTTTGCTGAGAACAGGGTCTTGTT TAGGTGAACAACCACGTGCCATGTGTTTTGGTCTTTGTTCTCAGAAAGCA TATCAGCTTTTGCACACAACTCC
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig98:47568..52790-

>mRNA_D-mesarthrocarpus_Contig98.14.1 ID=mRNA_D-mesarthrocarpus_Contig98.14.1|Name=mRNA_D-mesarthrocarpus_Contig98.14.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1116bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig98:47568..52790- (Discosporangium mesarthrocarpum MT17_79)
ATGGGCTTAGGGGTCTCCTCAACCAGGGGGATGACTGCACATCCAGGACA
GGAAATATGCCTTGCATGTTCCAAGCCTGCCAGTGGACAAGGGAAGGAAC
TCCGTGGCCGAGACCGCTTCTGCAGCAAGGTCTGCCAGGAGAAGTTTGGT
GTACAGACAGGGAAGGCTCTGCGTGCTGCAGTTTATGAGAGAGACCGAGG
TGTATGTGAAGGTTGCAAGAGAGATACCACAAGAATGGTTGAGGAGCTGC
AGGCAACTCCCTCCCATTTGGATAGGCTTCACTTGCTGAAGACTCTGGAT
GCTCGATTTGAGCTGCGCCACGAGCTGCTGAACCGCTTGATCCACAACCC
ATGTGCTGGGAATGCCTGGAATGCTGACCATGTCGTTGCAGTATTTGAGG
GCGGTGGTGAGTGTGGCGTGGATAACCTGCGGACCCTCTGCGTACTGTGC
CACGCTGATGTTACCAAGCGCCAGTCAAGGGAGCGGGCAGATGCTGCACT
GCACAGGTTATCAGAAGGGAGGGGTGAGGGGAACAGTAGTGGCACCAACA
AATCTACGGAGGGAACTCACATTGATCGTTCTTTTTGTCAGTATGGGGAG
ATATGGTCAGATGGTGCTTTAGGAGGCGTGTTGGATGAGGGTTGTGAACG
ACGGTGCAACACTGGGACAGATCAACAACAACCGGCGGCTACTGGCAAGA
GAAGTAGGGAATCATCACCACTAACAGTTGGTAGCATGACATCCATGACA
TCTACATACAACCCACCCACACCAAGCCCAGCGCGGTGTCAGCATACCAG
AACCACTGCCCCATGGCCGCCTGTTGACTATGAATCTGATGAGGATAAGG
AGGACGGGGATGAGTACGCAAATTGTGTAGGTGGCTCCTTCCACCAGATT
GTACCTGATGTAGACGTGTGTTCCTTGCTCTCCCGGACAACATTCCACAA
AACCACTGAGAGTGGTAAGTGCTTTCGGAGGTCCATTTGTTCACCAAGTG
ACCCCTCATCTTCCGACTGTGTGTTGATAGGTGGGGGTATTAGTTTCTCC
AGGGTAAAGCGCTCGACCAACATATCATTCAATGCGGGAATACCTGACAT
GAATACACAAGAGTAA
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