mRNA_D-mesarthrocarpus_Contig98.12.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig98.12.1
Unique NamemRNA_D-mesarthrocarpus_Contig98.12.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig98.12.1 vs. uniprot
Match: A0A482RXP7_9ARCH (Class I SAM-dependent methyltransferase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RXP7_9ARCH)

HSP 1 Score: 100 bits (248), Expect = 7.900e-22
Identity = 46/100 (46.00%), Postives = 63/100 (63.00%), Query Frame = 3 
Query:  165 EDEVSRRDVALGKAMTFNGPPPFMGRILDSPDLLWADDSWTPMEEEEAQRVLNTKGPPIKTFWKEKYERDSQKNWDRFYKRHGVKFFKDRHYLGKVFPEL 464
            E++ S      GK  +  GP  + G ILD P+LLW++D WT  +EEEA++ L  +G  +  +W+ KYE+ +   W +FYKRH   FFKDRHYL  VFPEL
Sbjct:   54 ENDKSSPPAEQGKQFSIEGPASYQGDILDDPELLWSEDVWTAEKEEEAKQRLQEQGANVSDYWRGKYEQQAGVYWHKFYKRHLDHFFKDRHYLHVVFPEL 153
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BLAST of mRNA_D-mesarthrocarpus_Contig98.12.1 vs. uniprot
Match: A0A7S2MQY1_9STRA (tRNA N(3)-methylcytidine methyltransferase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MQY1_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 4.510e-21
Identity = 44/92 (47.83%), Postives = 61/92 (66.30%), Query Frame = 3 
Query:  195 LGKAMTFNGPPPFM--GRILDSPDLLWADDSWTPMEEEEAQRVLNTKGPPIKTFWKEKYERDSQKNWDRFYKRHGVKFFKDRHYLGKVFPEL 464
            + +  T +GPP       +LDSP++LW +D+W P   EEA   +  +GPP++      YERD++KNWD FYKR+G  FFKDRHYL +V+PEL
Sbjct:   32 MSEHFTVDGPPSLGEGASVLDSPNMLWCEDTWDPKRVEEAIACVEKQGPPLREAMVRFYERDAKKNWDMFYKRNGTNFFKDRHYLARVYPEL 123
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BLAST of mRNA_D-mesarthrocarpus_Contig98.12.1 vs. uniprot
Match: A0A067C535_SAPPC (tRNA N(3)-methylcytidine methyltransferase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C535_SAPPC)

HSP 1 Score: 85.9 bits (211), Expect = 1.960e-16
Identity = 40/76 (52.63%), Postives = 49/76 (64.47%), Query Frame = 3 
Query:  243 ILDSPDLLWADDSWTPMEEEEAQRVLNTKGPPIKTFWKEKYERDSQKNWDRFYKRHGVKFFKDRHYLGKVFPELAP 470
            IL   D L  DD WTP  E  A  +LN     +  FW+EKYER++ K+WD FYKR+   F+KDRHYL  VFP+LAP
Sbjct:   18 ILKDEDALIIDDEWTPEREALALELLNQDKKVVPAFWQEKYEREAAKSWDLFYKRNSTNFYKDRHYLHVVFPDLAP 93
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BLAST of mRNA_D-mesarthrocarpus_Contig98.12.1 vs. uniprot
Match: A0A6A5AUN7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AUN7_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 2.110e-16
Identity = 37/76 (48.68%), Postives = 51/76 (67.11%), Query Frame = 3 
Query:  243 ILDSPDLLWADDSWTPMEEEEAQRVLNTKGPPIKTFWKEKYERDSQKNWDRFYKRHGVKFFKDRHYLGKVFPELAP 470
            I+D   +L ADD WT   EE A+ +L+     +  FW+ KYE+++ K+WD FYKR+   F+KDRHYL  VFP+LAP
Sbjct:   20 IIDDEGMLVADDEWTEEREELAKSLLDQDKKLVAPFWQSKYEKEAAKSWDLFYKRNSTNFYKDRHYLHVVFPDLAP 95
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BLAST of mRNA_D-mesarthrocarpus_Contig98.12.1 vs. uniprot
Match: W4H9Y5_9STRA (Methyltransf_25 domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H9Y5_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 1.510e-15
Identity = 38/76 (50.00%), Postives = 51/76 (67.11%), Query Frame = 3 
Query:  243 ILDSPDLLWADDSWTPMEEEEAQRVLNTKGPPIKTFWKEKYERDSQKNWDRFYKRHGVKFFKDRHYLGKVFPELAP 470
            I+D   LL ADD WT   EE A+ +L+     +  FW+ KYE+++ K+WD FYKR+   F+KDRHYL  VFP+LAP
Sbjct:   20 IIDDEGLLVADDEWTEEREELAKSLLDQDKKLVAPFWQSKYEKEAAKSWDLFYKRNSTNFYKDRHYLHVVFPDLAP 95
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BLAST of mRNA_D-mesarthrocarpus_Contig98.12.1 vs. uniprot
Match: A0A6H5JI62_9PHAE (tRNA N(3)-methylcytidine methyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JI62_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 4.780e-15
Identity = 41/90 (45.56%), Postives = 57/90 (63.33%), Query Frame = 3 
Query:  291 MEEEEAQRVLNTKGPPIKTFWKEKYERDSQKNWDRFYKRHGVKFFKDRHYLGKVFPEL----APPIFTPSVPASEAGRDGDNQAVTNEEG 548
            ++E+EA + +  KGPP+  FW++KYER+++K+WD FY R+   FFKDRHYLG VFPEL    A    +  +  SE  R+GD      E G
Sbjct:   23 LQEKEALQSVKGKGPPLSKFWRDKYEREARKSWDLFYGRNAGNFFKDRHYLGTVFPELTETGADLELSQRLEKSEVYRNGDGGETVTENG 112
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BLAST of mRNA_D-mesarthrocarpus_Contig98.12.1 vs. uniprot
Match: A0A2D4C7Y2_PYTIN (tRNA N(3)-methylcytidine methyltransferase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C7Y2_PYTIN)

HSP 1 Score: 80.9 bits (198), Expect = 1.430e-14
Identity = 35/74 (47.30%), Postives = 50/74 (67.57%), Query Frame = 3 
Query:  243 ILDSPDLLWADDSWTPMEEEEAQRVLNTKGPPIKTFWKEKYERDSQKNWDRFYKRHGVKFFKDRHYLGKVFPEL 464
            +L+ PD +  +D WT   EE A+ +L      I TFW+EKYE+ + K+WD+FYK++   F+KDRHYL  VFP+L
Sbjct:   25 VLEDPDKVVCEDEWTEEREELAKELLARDTSTIPTFWQEKYEKXAAKSWDKFYKKNSTNFYKDRHYLHIVFPDL 98
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BLAST of mRNA_D-mesarthrocarpus_Contig98.12.1 vs. uniprot
Match: A0A485LAU0_9STRA (tRNA N(3)-methylcytidine methyltransferase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LAU0_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 1.800e-14
Identity = 36/76 (47.37%), Postives = 49/76 (64.47%), Query Frame = 3 
Query:  243 ILDSPDLLWADDSWTPMEEEEAQRVLNTKGPPIKTFWKEKYERDSQKNWDRFYKRHGVKFFKDRHYLGKVFPELAP 470
            ++    LL A+D WT   E  A+ +L      + TFW+ KYE+++ KNWD FYKR+   F+KDRHYL  VFP+LAP
Sbjct:   20 VIQDEGLLVAEDEWTEEREVLAKELLEQDKKLVPTFWQSKYEKEAAKNWDLFYKRNSTNFYKDRHYLHVVFPDLAP 95
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BLAST of mRNA_D-mesarthrocarpus_Contig98.12.1 vs. uniprot
Match: A0A5D6XMV6_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XMV6_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 5.230e-14
Identity = 35/74 (47.30%), Postives = 47/74 (63.51%), Query Frame = 3 
Query:  243 ILDSPDLLWADDSWTPMEEEEAQRVLNTKGPPIKTFWKEKYERDSQKNWDRFYKRHGVKFFKDRHYLGKVFPEL 464
            +L +P+ +  DD WTP  E  AQ  L      I  FW+ KYE ++ +NWD+FYKR+   F+KDRHYL  VFP+L
Sbjct:   27 VLATPEQVVCDDEWTPERERLAQEHLRRDTSSIPEFWQRKYETEAARNWDKFYKRNSTNFYKDRHYLHLVFPDL 100
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig98.12.1 vs. uniprot
Match: A0A8K1CBA0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CBA0_PYTOL)

HSP 1 Score: 79.3 bits (194), Expect = 6.600e-14
Identity = 33/74 (44.59%), Postives = 51/74 (68.92%), Query Frame = 3 
Query:  243 ILDSPDLLWADDSWTPMEEEEAQRVLNTKGPPIKTFWKEKYERDSQKNWDRFYKRHGVKFFKDRHYLGKVFPEL 464
            +L+  D ++A+D+WT   E  A+ +L+     I  +W+ KYER++ K+WD+FYKR+   F+KDRHYL  VFP+L
Sbjct:   48 VLEEEDAIYAEDTWTEERERLARELLDQDTSSIPEYWQNKYEREAAKSWDKFYKRNTTNFYKDRHYLHLVFPDL 121
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig98.12.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A482RXP7_9ARCH7.900e-2246.00Class I SAM-dependent methyltransferase n=1 Tax=ar... [more]
A0A7S2MQY1_9STRA4.510e-2147.83tRNA N(3)-methylcytidine methyltransferase n=1 Tax... [more]
A0A067C535_SAPPC1.960e-1652.63tRNA N(3)-methylcytidine methyltransferase n=2 Tax... [more]
A0A6A5AUN7_9STRA2.110e-1648.68Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
W4H9Y5_9STRA1.510e-1550.00Methyltransf_25 domain-containing protein n=1 Tax=... [more]
A0A6H5JI62_9PHAE4.780e-1545.56tRNA N(3)-methylcytidine methyltransferase n=2 Tax... [more]
A0A2D4C7Y2_PYTIN1.430e-1447.30tRNA N(3)-methylcytidine methyltransferase n=1 Tax... [more]
A0A485LAU0_9STRA1.800e-1447.37tRNA N(3)-methylcytidine methyltransferase n=1 Tax... [more]
A0A5D6XMV6_9STRA5.230e-1447.30Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A8K1CBA0_PYTOL6.600e-1444.59Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig98contigD-mesarthrocarpus_Contig98:34840..36482 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7G2E0
PFAMsMethyltransf_23
Model size658
Max annot lvl2759|Eukaryota
KEGG rclassRC00003,RC00113,RC00392,RC01244
KEGG koko:K00599
KEGG ReactionR02671,R02912,R03955,R04939
Hectar predicted targeting categoryother localisation
Exons4
Evalue2.96e-18
EggNOG OGsKOG2361@1|root,KOG2361@2759|Eukaryota
DescriptiontRNA (cytosine) methyltransferase activity
Cds size627
COG categoryS
BRITEko00000,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791131.4634664-CDS-D-mesarthrocarpus_Contig98:34839..349501680791131.4634664-CDS-D-mesarthrocarpus_Contig98:34839..34950Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig98 34840..34950 -
1680791131.4822547-CDS-D-mesarthrocarpus_Contig98:35406..356551680791131.4822547-CDS-D-mesarthrocarpus_Contig98:35406..35655Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig98 35407..35655 -
1680791131.4928863-CDS-D-mesarthrocarpus_Contig98:36068..362081680791131.4928863-CDS-D-mesarthrocarpus_Contig98:36068..36208Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig98 36069..36208 -
1680791131.5139878-CDS-D-mesarthrocarpus_Contig98:36326..364531680791131.5139878-CDS-D-mesarthrocarpus_Contig98:36326..36453Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig98 36327..36453 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791131.5319028-UTR-D-mesarthrocarpus_Contig98:36453..364821680791131.5319028-UTR-D-mesarthrocarpus_Contig98:36453..36482Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig98 36454..36482 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig98.12.1prot_D-mesarthrocarpus_Contig98.12.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig98 34840..36453 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig98.12.1

>prot_D-mesarthrocarpus_Contig98.12.1 ID=prot_D-mesarthrocarpus_Contig98.12.1|Name=mRNA_D-mesarthrocarpus_Contig98.12.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=209bp
MTDTGNIPQEHHCALALYLLLLGPEYRGLGQREMGKEELGQTGLWEDEVS
RRDVALGKAMTFNGPPPFMGRILDSPDLLWADDSWTPMEEEEAQRVLNTK
GPPIKTFWKEKYERDSQKNWDRFYKRHGVKFFKDRHYLGKVFPELAPPIF
TPSVPASEAGRDGDNQAVTNEEGPGLRPTCPISGCNLNSDISIGNAHGGN
TGRGREGMK
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mRNA from alignment at D-mesarthrocarpus_Contig98:34840..36482-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig98.12.1 ID=mRNA_D-mesarthrocarpus_Contig98.12.1|Name=mRNA_D-mesarthrocarpus_Contig98.12.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1643bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig98:34840..36482- (Discosporangium mesarthrocarpum MT17_79)
ATCAAGTTTACATCAACAGATTGTCAAGGATGACAGATACAGGGAATATC
CCCCAAGAGCATCACTGCGCACTTGCCTTATACCTGCTACTTCTTGGGCC
AGAGTACAGGGGATTGGGTCAAAGGGAAATGGGCAAAGAAGAACTGGGTC
AAACAGGTGCTTAAAAATGATCACGACACATAGCGCACAGCAGGCCCACT
TCACCCCAAGTATGTCAACGGTAGTATGCCCCTACCCACTGGAAAGTCCA
TCCTTTTGCCTTCCTCTCCGACAGGTCTGTGGGAAGATGAGGTATCAAGG
CGGGACGTGGCTCTCGGCAAGGCGATGACCTTCAACGGACCACCACCCTT
TATGGGTCGAATCCTGGACAGTCCGGACCTTCTGTGGGCGGATGACTCGT
GGACGCCTATGGAGGTAGTTAGATTCTATGGAAGGTCGAGGGTGCACGCT
GTTTGTATTGATAGGCGGAACGCTGATCCAACAAACGCCAATCCAGCTCG
GGTTAGGGTCAACCAGAATACTTCCTCAGCTTCAGTTTTACATCACAGGC
TGCCGTTTGCAGGAATCCCGTGTGTGTAAACCCTGTGGATATCACCTCCT
TCATCTTCTCGAAAGTTAACACCAACCCCGAGTCCTCACGGTTCGAAAGC
CGTTTCCTTGGTCACGTGTCTTCCCACTGATGTTGAGGCCTGCATCAAAT
CCGTCTCCTTCTCCAACAATCATTTCTAATAATCCCATCATAAAAATGGG
GAAAGGAAATCGTGTTCCACCGCTTAATCCTAGCACTCTCGTTTCTTAGT
TCCTTTGCACCTTCTCATCGAATCCAGGAGGAGGAAGCCCAGCGGGTGCT
CAATACGAAGGGGCCGCCCATCAAGACATTTTGGAAGGAGAAATACGAGC
GAGATTCACAGAAGAACTGGGACCGCTTCTACAAGCGGCATGGGGTGAAG
TTTTTCAAGGATCGTCACTACCTTGGGAAGGTATTCCCTGAGCTTGCCCC
TCCTATTTTTACGCCTTCCGTTCCCGCGAGCGAGGCAGGGAGAGACGGTG
ACAATCAAGCGGTAACAAATGAGGAGGTACGAATGTATGACTGTGCTTGT
GCTTGCAAGGACATTTAAGACATGCAGCGAATACATCCATAAGGGTTCGC
AAAGGGTTGCAGCTTCCTCCTTCATCCTGCCCTATCCCTGTCATGCTGCG
CATGAGGTCCTGCCCTGCCCCTTGTTGGCATAGGCTGTCCTTCCAAGTTT
AGCTTACTATGGTGTGCACACTGTGCTGCCTTGCAGAGCTATGGACCAAA
CCCCCAATTTGATTGACTCTTGCCAGACTGCTATGTAACCTGCACCACCC
ACTTTGTTGGTATGATACTTTTGTCCCCGTTAGCAGAAAAGGTCCAAATC
CCTCATGTATACCCTCATGCATACCCATGTGTATAGCATCAGTTGAGCGT
ACATGTGACTTATAGTGAATTGTTATGAATTGTAATGACCACCACTCTCC
TGCTTGTAATTGCTATATGACTTTCAAAGCAGGGTCCTGGATTAAGACCT
ACTTGCCCCATAAGTGGTTGTAACCTTAACAGTGACATCAGTATTGGAAA
TGCCCATGGTGGTAATACCGGGAGAGGTCGAGAGGGGATGAAG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig98:34840..36482-

>mRNA_D-mesarthrocarpus_Contig98.12.1 ID=mRNA_D-mesarthrocarpus_Contig98.12.1|Name=mRNA_D-mesarthrocarpus_Contig98.12.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=627bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig98:34840..36482- (Discosporangium mesarthrocarpum MT17_79)
ATGACAGATACAGGGAATATCCCCCAAGAGCATCACTGCGCACTTGCCTT
ATACCTGCTACTTCTTGGGCCAGAGTACAGGGGATTGGGTCAAAGGGAAA
TGGGCAAAGAAGAACTGGGTCAAACAGGTCTGTGGGAAGATGAGGTATCA
AGGCGGGACGTGGCTCTCGGCAAGGCGATGACCTTCAACGGACCACCACC
CTTTATGGGTCGAATCCTGGACAGTCCGGACCTTCTGTGGGCGGATGACT
CGTGGACGCCTATGGAGGAGGAGGAAGCCCAGCGGGTGCTCAATACGAAG
GGGCCGCCCATCAAGACATTTTGGAAGGAGAAATACGAGCGAGATTCACA
GAAGAACTGGGACCGCTTCTACAAGCGGCATGGGGTGAAGTTTTTCAAGG
ATCGTCACTACCTTGGGAAGGTATTCCCTGAGCTTGCCCCTCCTATTTTT
ACGCCTTCCGTTCCCGCGAGCGAGGCAGGGAGAGACGGTGACAATCAAGC
GGTAACAAATGAGGAGGGTCCTGGATTAAGACCTACTTGCCCCATAAGTG
GTTGTAACCTTAACAGTGACATCAGTATTGGAAATGCCCATGGTGGTAAT
ACCGGGAGAGGTCGAGAGGGGATGAAG
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