mRNA_D-mesarthrocarpus_Contig9795.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9795.1.1 vs. uniprot
Match: A0A6H5KTE4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTE4_9PHAE) HSP 1 Score: 116 bits (290), Expect = 4.150e-26 Identity = 64/123 (52.03%), Postives = 77/123 (62.60%), Query Frame = 1
Query: 7 GGGQAELRSTSVGIINRMRLYPIALVVCWSWATVNRIHEALAPY-ESIFWLYVLQYTFQAMHGVLNAIIFALTPAVTREWGDQLRKWGLVGVG------PTVDSTALLDPSDVVPVRESQGAR 354
G G AE STS+ II R+RLYPI LV+CWSWATVNRI EA+ PY ES FWL++LQY+FQ++ G LN +IF TP V EW D + KW TVD + LLD S PV G +
Sbjct: 126 GPGGAET-STSIPIIERLRLYPIVLVICWSWATVNRIREAIEPYAESRFWLFILQYSFQSIQGFLNLMIFLRTPGVMEEWRDDINKWSCGDCCWPFRRVRTVDRSGLLDSSST-PVSSEPGRK 246
BLAST of mRNA_D-mesarthrocarpus_Contig9795.1.1 vs. uniprot
Match: D8LGC7_ECTSI (Related to G-protein coupled receptors n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGC7_ECTSI) HSP 1 Score: 115 bits (288), Expect = 2.220e-25 Identity = 58/110 (52.73%), Postives = 71/110 (64.55%), Query Frame = 1
Query: 31 STSVGIINRMRLYPIALVVCWSWATVNRIHEALAPY-ESIFWLYVLQYTFQAMHGVLNAIIFALTPAVTREWGDQLRKWGLVGVG------PTVDSTALLDPSDVVPVRE 339
STS+ II R+RLYPI LVVCWSWATVNR EA+ PY ES+FWL++LQY+FQ++ G LN +IF TP V EW D ++KW TVD LLD S + E
Sbjct: 180 STSIPIIERLRLYPIVLVVCWSWATVNRTREAIEPYAESLFWLFILQYSFQSIQGFLNLMIFLRTPGVMEEWRDDIKKWSCGDCCWPFRRVRTVDRAGLLDSSSTSSLSE 289
BLAST of mRNA_D-mesarthrocarpus_Contig9795.1.1 vs. uniprot
Match: A0A835ZGG8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGG8_9STRA) HSP 1 Score: 100 bits (249), Expect = 5.680e-19 Identity = 46/92 (50.00%), Postives = 65/92 (70.65%), Query Frame = 1
Query: 1 AEGGGQAELRSTSVGIINRMRLYPIALVVCWSWATVNRIHEALAPYESIFWLYVLQYTFQAMHGVLNAIIFALTPAVTREWGD---QLRKWG 267
AE G +S ++ +I R+R+YP+ L VCWSWA+VNR++E AP FWLY+LQY+FQ ++GVLNAI++A+TP+V EW QL + G
Sbjct: 311 AEHTGLVHGQSRALAVIARLRMYPVVLCVCWSWASVNRVYELAAPDAPQFWLYLLQYSFQTLNGVLNAIVYAVTPSVDEEWAQWAQQLHRRG 402
BLAST of mRNA_D-mesarthrocarpus_Contig9795.1.1 vs. uniprot
Match: A0A830HCH9_9CHLO (Glycolytic proteins transcriptional activator gcr1 n=2 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HCH9_9CHLO) HSP 1 Score: 67.0 bits (162), Expect = 1.800e-8 Identity = 34/98 (34.69%), Postives = 57/98 (58.16%), Query Frame = 1
Query: 25 LRSTSVGIINRMRLYPIALVVCWSWATVNRIHEALAPYESIFWLYVLQYTFQAMHGVLNAIIFALTPAVTREWGDQLRKWGLVGVGPTVDSTALLDPS 318
+R ++ + R+ L+P+ LV CW +AT+NRI+E ++ LY LQ ++ G+LNA+++ + P+V W L KW +VG P + S A + S
Sbjct: 221 MRLRNLKQMRRIGLFPLILVGCWMFATINRIYEMFDG-SPVYGLYALQVLSSSLSGLLNALVYGMMPSVRGAWSRVLEKWPIVG--PLLSSQARVGTS 315
BLAST of mRNA_D-mesarthrocarpus_Contig9795.1.1 vs. uniprot
Match: L1K590_GUITC (G_PROTEIN_RECEP_F2_4 domain-containing protein n=2 Tax=Geminigeraceae TaxID=589343 RepID=L1K590_GUITC) HSP 1 Score: 63.2 bits (152), Expect = 6.150e-8 Identity = 31/84 (36.90%), Postives = 50/84 (59.52%), Query Frame = 1
Query: 31 STSVGIINRMRLYPIALVVCWSWATVNRIHEALAPYESIFWLYVLQYTFQAMHGVLNAIIFALTPAVTREWGDQLRKWGLVGVG 282
+T + + R+ LYP+ L++CW + T+NRI+ +L P E IF LY L F +M G N +++ ++ AV + + L W L VG
Sbjct: 83 NTDLQVFWRLALYPVILIICWFFGTINRIYNSLHPDEPIFALYFLHKFFGSMQGFFNFLVYGMSTAVRAKLYEVL-SWTLSLVG 165
BLAST of mRNA_D-mesarthrocarpus_Contig9795.1.1 vs. uniprot
Match: A0A7S4L1A2_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4L1A2_GUITH) HSP 1 Score: 63.2 bits (152), Expect = 2.640e-7 Identity = 31/84 (36.90%), Postives = 50/84 (59.52%), Query Frame = 1
Query: 31 STSVGIINRMRLYPIALVVCWSWATVNRIHEALAPYESIFWLYVLQYTFQAMHGVLNAIIFALTPAVTREWGDQLRKWGLVGVG 282
+T + + R+ LYP+ L++CW + T+NRI+ +L P E IF LY L F +M G N +++ ++ AV + + L W L VG
Sbjct: 200 NTDLQVFWRLALYPVILIICWFFGTINRIYNSLHPDEPIFALYFLHKFFGSMQGFFNFLVYGMSTAVRAKLYEVL-SWTLSLVG 282
BLAST of mRNA_D-mesarthrocarpus_Contig9795.1.1 vs. uniprot
Match: A0A7S2F7C4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F7C4_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 3.880e-7 Identity = 27/72 (37.50%), Postives = 42/72 (58.33%), Query Frame = 1
Query: 28 RSTSVGIINRMRLYPIALVVCWSWATVNRIHEALAPYESIFWLYVLQYTFQAMHGVLNAIIFALTPAVTREW 243
R+ + R++LYP+ LVV W+W T+ L P + IFWL + Y+ ++ G LNA ++ TP+V R W
Sbjct: 218 RANQNQFVERLQLYPLVLVVSWTWVTIYCFQAMLEPDQHIFWLAWIGYSMCSLMGFLNACVYVATPSVWRAW 289
BLAST of mRNA_D-mesarthrocarpus_Contig9795.1.1 vs. uniprot
Match: A0A7S0YRU1_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YRU1_9CRYP) HSP 1 Score: 55.8 bits (133), Expect = 3.360e-6 Identity = 31/86 (36.05%), Postives = 44/86 (51.16%), Query Frame = 1
Query: 1 AEGGGQAELRSTSVGIINRMRLYPIALVVCWSWATVNRIHEALAPYESIFWLYVLQYTFQAMHGVLNAIIFALTPAVTREWGDQLR 258
+EG G +++ + R+ LYP+ LVVCWS AT+NRIH + P I+WL Q G N + + L V D+LR
Sbjct: 5 SEGAGGGDMK-----VFWRLGLYPVILVVCWSAATINRIHNTINPENPIYWLTCAQVFLSNSAGCWNCLAYGLNSNVR----DKLR 81
BLAST of mRNA_D-mesarthrocarpus_Contig9795.1.1 vs. uniprot
Match: A0A7S1C6G2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C6G2_9STRA) HSP 1 Score: 55.8 bits (133), Expect = 3.990e-6 Identity = 24/43 (55.81%), Postives = 28/43 (65.12%), Query Frame = 1
Query: 64 LYPIALVVCWSWATVNRIHEALAPYESIFWLYVLQYTFQAMHG 192
LYP+ L+VCW WATVNR+ +AP E FWLY L F A G
Sbjct: 68 LYPLILLVCWFWATVNRLQNLVAPEEPQFWLYALGLAFAACQG 110
BLAST of mRNA_D-mesarthrocarpus_Contig9795.1.1 vs. uniprot
Match: A0A7S1HMG1_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HMG1_HEMAN) HSP 1 Score: 57.4 bits (137), Expect = 2.010e-5 Identity = 33/91 (36.26%), Postives = 49/91 (53.85%), Query Frame = 1
Query: 10 GGQAELRSTSVGIINRMRLYPIALVVCWSWATVNRIHEALAPYESIFWLYVLQYTFQAMHGVLNAIIFALTPAVTREWGDQLRKWGLVGVG 282
GG +E S + + R+ LYP+ LV+CW+ A+VNRIH ++ P + I+WL Q G N + + L V D+LR GL+ G
Sbjct: 194 GGGSEGSSGDMKVFWRLGLYPVILVICWTAASVNRIHNSIYPSQPIYWLTCTQVFLSNSAGCWNCLAYGLNSNVR----DKLR--GLLSGG 278 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9795.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig9795.1.1 >prot_D-mesarthrocarpus_Contig9795.1.1 ID=prot_D-mesarthrocarpus_Contig9795.1.1|Name=mRNA_D-mesarthrocarpus_Contig9795.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=118bp MRLYPIALVVCWSWATVNRIHEALAPYESIFWLYVLQYTFQAMHGVLNAIback to top mRNA from alignment at D-mesarthrocarpus_Contig9795:6..1426+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig9795.1.1 ID=mRNA_D-mesarthrocarpus_Contig9795.1.1|Name=mRNA_D-mesarthrocarpus_Contig9795.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1421bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9795:6..1426+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9795:6..1426+ >mRNA_D-mesarthrocarpus_Contig9795.1.1 ID=mRNA_D-mesarthrocarpus_Contig9795.1.1|Name=mRNA_D-mesarthrocarpus_Contig9795.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=354bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9795:6..1426+ (Discosporangium mesarthrocarpum MT17_79)back to top |