mRNA_D-mesarthrocarpus_Contig9795.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9795.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig9795.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9795.1.1 vs. uniprot
Match: A0A6H5KTE4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTE4_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 4.150e-26
Identity = 64/123 (52.03%), Postives = 77/123 (62.60%), Query Frame = 1
Query:    7 GGGQAELRSTSVGIINRMRLYPIALVVCWSWATVNRIHEALAPY-ESIFWLYVLQYTFQAMHGVLNAIIFALTPAVTREWGDQLRKWGLVGVG------PTVDSTALLDPSDVVPVRESQGAR 354
            G G AE  STS+ II R+RLYPI LV+CWSWATVNRI EA+ PY ES FWL++LQY+FQ++ G LN +IF  TP V  EW D + KW             TVD + LLD S   PV    G +
Sbjct:  126 GPGGAET-STSIPIIERLRLYPIVLVICWSWATVNRIREAIEPYAESRFWLFILQYSFQSIQGFLNLMIFLRTPGVMEEWRDDINKWSCGDCCWPFRRVRTVDRSGLLDSSST-PVSSEPGRK 246          
BLAST of mRNA_D-mesarthrocarpus_Contig9795.1.1 vs. uniprot
Match: D8LGC7_ECTSI (Related to G-protein coupled receptors n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGC7_ECTSI)

HSP 1 Score: 115 bits (288), Expect = 2.220e-25
Identity = 58/110 (52.73%), Postives = 71/110 (64.55%), Query Frame = 1
Query:   31 STSVGIINRMRLYPIALVVCWSWATVNRIHEALAPY-ESIFWLYVLQYTFQAMHGVLNAIIFALTPAVTREWGDQLRKWGLVGVG------PTVDSTALLDPSDVVPVRE 339
            STS+ II R+RLYPI LVVCWSWATVNR  EA+ PY ES+FWL++LQY+FQ++ G LN +IF  TP V  EW D ++KW             TVD   LLD S    + E
Sbjct:  180 STSIPIIERLRLYPIVLVVCWSWATVNRTREAIEPYAESLFWLFILQYSFQSIQGFLNLMIFLRTPGVMEEWRDDIKKWSCGDCCWPFRRVRTVDRAGLLDSSSTSSLSE 289          
BLAST of mRNA_D-mesarthrocarpus_Contig9795.1.1 vs. uniprot
Match: A0A835ZGG8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGG8_9STRA)

HSP 1 Score: 100 bits (249), Expect = 5.680e-19
Identity = 46/92 (50.00%), Postives = 65/92 (70.65%), Query Frame = 1
Query:    1 AEGGGQAELRSTSVGIINRMRLYPIALVVCWSWATVNRIHEALAPYESIFWLYVLQYTFQAMHGVLNAIIFALTPAVTREWGD---QLRKWG 267
            AE  G    +S ++ +I R+R+YP+ L VCWSWA+VNR++E  AP    FWLY+LQY+FQ ++GVLNAI++A+TP+V  EW     QL + G
Sbjct:  311 AEHTGLVHGQSRALAVIARLRMYPVVLCVCWSWASVNRVYELAAPDAPQFWLYLLQYSFQTLNGVLNAIVYAVTPSVDEEWAQWAQQLHRRG 402          
BLAST of mRNA_D-mesarthrocarpus_Contig9795.1.1 vs. uniprot
Match: A0A830HCH9_9CHLO (Glycolytic proteins transcriptional activator gcr1 n=2 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HCH9_9CHLO)

HSP 1 Score: 67.0 bits (162), Expect = 1.800e-8
Identity = 34/98 (34.69%), Postives = 57/98 (58.16%), Query Frame = 1
Query:   25 LRSTSVGIINRMRLYPIALVVCWSWATVNRIHEALAPYESIFWLYVLQYTFQAMHGVLNAIIFALTPAVTREWGDQLRKWGLVGVGPTVDSTALLDPS 318
            +R  ++  + R+ L+P+ LV CW +AT+NRI+E       ++ LY LQ    ++ G+LNA+++ + P+V   W   L KW +VG  P + S A +  S
Sbjct:  221 MRLRNLKQMRRIGLFPLILVGCWMFATINRIYEMFDG-SPVYGLYALQVLSSSLSGLLNALVYGMMPSVRGAWSRVLEKWPIVG--PLLSSQARVGTS 315          
BLAST of mRNA_D-mesarthrocarpus_Contig9795.1.1 vs. uniprot
Match: L1K590_GUITC (G_PROTEIN_RECEP_F2_4 domain-containing protein n=2 Tax=Geminigeraceae TaxID=589343 RepID=L1K590_GUITC)

HSP 1 Score: 63.2 bits (152), Expect = 6.150e-8
Identity = 31/84 (36.90%), Postives = 50/84 (59.52%), Query Frame = 1
Query:   31 STSVGIINRMRLYPIALVVCWSWATVNRIHEALAPYESIFWLYVLQYTFQAMHGVLNAIIFALTPAVTREWGDQLRKWGLVGVG 282
            +T + +  R+ LYP+ L++CW + T+NRI+ +L P E IF LY L   F +M G  N +++ ++ AV  +  + L  W L  VG
Sbjct:   83 NTDLQVFWRLALYPVILIICWFFGTINRIYNSLHPDEPIFALYFLHKFFGSMQGFFNFLVYGMSTAVRAKLYEVL-SWTLSLVG 165          
BLAST of mRNA_D-mesarthrocarpus_Contig9795.1.1 vs. uniprot
Match: A0A7S4L1A2_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4L1A2_GUITH)

HSP 1 Score: 63.2 bits (152), Expect = 2.640e-7
Identity = 31/84 (36.90%), Postives = 50/84 (59.52%), Query Frame = 1
Query:   31 STSVGIINRMRLYPIALVVCWSWATVNRIHEALAPYESIFWLYVLQYTFQAMHGVLNAIIFALTPAVTREWGDQLRKWGLVGVG 282
            +T + +  R+ LYP+ L++CW + T+NRI+ +L P E IF LY L   F +M G  N +++ ++ AV  +  + L  W L  VG
Sbjct:  200 NTDLQVFWRLALYPVILIICWFFGTINRIYNSLHPDEPIFALYFLHKFFGSMQGFFNFLVYGMSTAVRAKLYEVL-SWTLSLVG 282          
BLAST of mRNA_D-mesarthrocarpus_Contig9795.1.1 vs. uniprot
Match: A0A7S2F7C4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F7C4_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 3.880e-7
Identity = 27/72 (37.50%), Postives = 42/72 (58.33%), Query Frame = 1
Query:   28 RSTSVGIINRMRLYPIALVVCWSWATVNRIHEALAPYESIFWLYVLQYTFQAMHGVLNAIIFALTPAVTREW 243
            R+     + R++LYP+ LVV W+W T+      L P + IFWL  + Y+  ++ G LNA ++  TP+V R W
Sbjct:  218 RANQNQFVERLQLYPLVLVVSWTWVTIYCFQAMLEPDQHIFWLAWIGYSMCSLMGFLNACVYVATPSVWRAW 289          
BLAST of mRNA_D-mesarthrocarpus_Contig9795.1.1 vs. uniprot
Match: A0A7S0YRU1_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YRU1_9CRYP)

HSP 1 Score: 55.8 bits (133), Expect = 3.360e-6
Identity = 31/86 (36.05%), Postives = 44/86 (51.16%), Query Frame = 1
Query:    1 AEGGGQAELRSTSVGIINRMRLYPIALVVCWSWATVNRIHEALAPYESIFWLYVLQYTFQAMHGVLNAIIFALTPAVTREWGDQLR 258
            +EG G  +++     +  R+ LYP+ LVVCWS AT+NRIH  + P   I+WL   Q       G  N + + L   V     D+LR
Sbjct:    5 SEGAGGGDMK-----VFWRLGLYPVILVVCWSAATINRIHNTINPENPIYWLTCAQVFLSNSAGCWNCLAYGLNSNVR----DKLR 81          
BLAST of mRNA_D-mesarthrocarpus_Contig9795.1.1 vs. uniprot
Match: A0A7S1C6G2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C6G2_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 3.990e-6
Identity = 24/43 (55.81%), Postives = 28/43 (65.12%), Query Frame = 1
Query:   64 LYPIALVVCWSWATVNRIHEALAPYESIFWLYVLQYTFQAMHG 192
            LYP+ L+VCW WATVNR+   +AP E  FWLY L   F A  G
Sbjct:   68 LYPLILLVCWFWATVNRLQNLVAPEEPQFWLYALGLAFAACQG 110          
BLAST of mRNA_D-mesarthrocarpus_Contig9795.1.1 vs. uniprot
Match: A0A7S1HMG1_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HMG1_HEMAN)

HSP 1 Score: 57.4 bits (137), Expect = 2.010e-5
Identity = 33/91 (36.26%), Postives = 49/91 (53.85%), Query Frame = 1
Query:   10 GGQAELRSTSVGIINRMRLYPIALVVCWSWATVNRIHEALAPYESIFWLYVLQYTFQAMHGVLNAIIFALTPAVTREWGDQLRKWGLVGVG 282
            GG +E  S  + +  R+ LYP+ LV+CW+ A+VNRIH ++ P + I+WL   Q       G  N + + L   V     D+LR  GL+  G
Sbjct:  194 GGGSEGSSGDMKVFWRLGLYPVILVICWTAASVNRIHNSIYPSQPIYWLTCTQVFLSNSAGCWNCLAYGLNSNVR----DKLR--GLLSGG 278          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9795.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A6H5KTE4_9PHAE4.150e-2652.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LGC7_ECTSI2.220e-2552.73Related to G-protein coupled receptors n=1 Tax=Ect... [more]
A0A835ZGG8_9STRA5.680e-1950.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A830HCH9_9CHLO1.800e-834.69Glycolytic proteins transcriptional activator gcr1... [more]
L1K590_GUITC6.150e-836.90G_PROTEIN_RECEP_F2_4 domain-containing protein n=2... [more]
A0A7S4L1A2_GUITH2.640e-736.90Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
A0A7S2F7C4_9STRA3.880e-737.50Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S0YRU1_9CRYP3.360e-636.05Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S1C6G2_9STRA3.990e-655.81Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S1HMG1_HEMAN2.010e-536.26Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9795contigD-mesarthrocarpus_Contig9795:6..1426 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog3750.XP_008393564.1
PFAMsDicty_CAR
Model size1421
Max annot lvl35493|Streptophyta
KEGG koko:K08467
Hectar predicted targeting categorysignal peptide
GOsGO:0000003,GO:0000278,GO:0001101,GO:0003006,GO:0003674,GO:0004888,GO:0004930,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0005794,GO:0005886,GO:0005887,GO:0006082,GO:0006109,GO:0006520,GO:0006558,GO:0006570,GO:0006571,GO:0006725,GO:0006807,GO:0007049,GO:0007154,GO:0007165,GO:0007186,GO:0007202,GO:0007275,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009094,GO:0009095,GO:0009314,GO:0009416,GO:0009628,GO:0009637,GO:0009642,GO:0009645,GO:0009719,GO:0009725,GO:0009735,GO:0009737,GO:0009738,GO:0009741,GO:0009742,GO:0009755,GO:0009785,GO:0009787,GO:0009788,GO:0009791,GO:0009845,GO:0009889,GO:0009908,GO:0009937,GO:0009939,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010033,GO:0010154,GO:0010162,GO:0010231,GO:0010244,GO:0010431,GO:0010517,GO:0010518,GO:0010646,GO:0010647,GO:0010648,GO:0010675,GO:0010863,GO:0010919,GO:0012505,GO:0014070,GO:0016020,GO:0016021,GO:0016053,GO:0017144,GO:0019220,GO:0019222,GO:0019438,GO:0019752,GO:0021700,GO:0022414,GO:0022611,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030522,GO:0031090,GO:0031224,GO:0031226,GO:0031323,GO:0031326,GO:0032501,GO:0032502,GO:0032504,GO:0032870,GO:0032960,GO:0033993,GO:0038023,GO:0042221,GO:0043085,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043255,GO:0043401,GO:0043436,GO:0044093,GO:0044214,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044437,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0046394,GO:0048316,GO:0048367,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048545,GO:0048583,GO:0048584,GO:0048585,GO:0048608,GO:0048609,GO:0048731,GO:0048856,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051174,GO:0051336,GO:0051345,GO:0051716,GO:0060089,GO:0060191,GO:0060193,GO:0061458,GO:0062012,GO:0065007,GO:0065009,GO:0070887,GO:0071214,GO:0071215,GO:0071229,GO:0071310,GO:0071367,GO:0071383,GO:0071396,GO:0071407,GO:0071478,GO:0071482,GO:0071483,GO:0071495,GO:0071695,GO:0071704,GO:0071944,GO:0080090,GO:0089717,GO:0090351,GO:0090567,GO:0097305,GO:0097306,GO:0097437,GO:0098588,GO:0098805,GO:0104004,GO:1900274,GO:1901360,GO:1901362,GO:1901419,GO:1901420,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1901700,GO:1901701,GO:1902221,GO:1902223,GO:1902930,GO:1905957,GO:1905958
Exons1
Evalue2.11e-09
EggNOG OGs28MT7@1|root,2QUBH@2759|Eukaryota,37NNG@33090|Viridiplantae,3GCHK@35493|Streptophyta,4JDIH@91835|fabids
DescriptionG-protein coupled receptor
Cds size354
COG categoryT
BRITEko00000,ko04030
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791130.4902947-UTR-D-mesarthrocarpus_Contig9795:5..621680791130.4902947-UTR-D-mesarthrocarpus_Contig9795:5..62Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig9795 6..62 +
1680791130.5219553-UTR-D-mesarthrocarpus_Contig9795:416..14261680791130.5219553-UTR-D-mesarthrocarpus_Contig9795:416..1426Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig9795 417..1426 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791130.5085726-CDS-D-mesarthrocarpus_Contig9795:62..4161680791130.5085726-CDS-D-mesarthrocarpus_Contig9795:62..416Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9795 63..416 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9795.1.1prot_D-mesarthrocarpus_Contig9795.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9795 63..416 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9795.1.1

>prot_D-mesarthrocarpus_Contig9795.1.1 ID=prot_D-mesarthrocarpus_Contig9795.1.1|Name=mRNA_D-mesarthrocarpus_Contig9795.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=118bp
MRLYPIALVVCWSWATVNRIHEALAPYESIFWLYVLQYTFQAMHGVLNAI
IFALTPAVTREWGDQLRKWGLVGVGPTVDSTALLDPSDVVPVRESQGARV
GVHETHAGRERMKAAGS*
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mRNA from alignment at D-mesarthrocarpus_Contig9795:6..1426+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9795.1.1 ID=mRNA_D-mesarthrocarpus_Contig9795.1.1|Name=mRNA_D-mesarthrocarpus_Contig9795.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1421bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9795:6..1426+ (Discosporangium mesarthrocarpum MT17_79)
GCAGAGGGAGGGGGTCAAGCAGAACTGAGATCAACTTCAGTGGGGATAAT CAACCGCATGCGCCTGTACCCAATTGCGCTGGTGGTTTGCTGGAGCTGGG CAACAGTGAACCGCATCCATGAGGCATTAGCACCATATGAGTCAATATTT TGGCTGTACGTTCTTCAATACACATTCCAGGCCATGCATGGAGTCCTCAA TGCCATTATCTTCGCCTTAACCCCAGCTGTTACCAGGGAGTGGGGGGACC AGCTGCGGAAGTGGGGCCTGGTTGGGGTAGGTCCAACGGTGGACAGTACT GCCCTGTTGGACCCTTCAGATGTAGTGCCCGTCAGGGAGAGCCAAGGGGC CAGGGTTGGGGTCCATGAGACACATGCTGGGCGAGAGAGGATGAAGGCTG CAGGAAGTTGACATTTCAGGCAACGGATCGATTGAGGTGGTTTAGTTTAC AGGGAGTTAGGAGGTATTAAGGAAGAAAGCTAGCTTGCTCATAATTCCGA TTCCTGCTCTGCCACTCAGGGTGTGTCTGATTCCGGTTCCTGGCCACACT AATACTAATGTGCTGCGGTTCGCTAGTTGTGAACTCAGGTGTATGTGTAG TTTGTACTGCTGTTGACTTCAAAGCAAAGTTCCAGTAGAGCACTCTGTGG TGAAGATGTGAGGTACCTATAACGGTATTTGTGTGTGCTGTGTTTTTTGT CTCCCAAGTGGAACTTTGTTTCAGCAAGTTGCCAAAGGCACAGCCTGGTG CCTGGTCAGCAATACTGCTCCTGTGAGGTATTGAATTAGGGTCAGCGATG GCCAAGGCCGGATAAGTGACATCTGCCAGTGCTTGTATCTACTTGAGTCA TGTATAGCAGTCACTGTTACTTATGTTGTATGTACTGCACATGTCGGTGT TGTGATTTGTGATTCGTGCTCTCACAAGGCACTGAAAGGAATTGTTTGGT GTGTTATTTTTGTGCCCTGGAATCTGTTGCTACTTTCACTACCTTACTGT GCTTTTGCAATACGTTTGAGAGCAAGCATGTAGTCTGGTTTCCCACTGAT GTGTGTGACCTCTTGTTCTGCAAGAGAACCCCATGCACTAGAGCTCTCCT CAAAGAAGCTGCACATTCTAGAGACCTTAACATCAAAGTGGAACGTCATA CCGCTGATGGAACTCTTGATTCCACAAGTTTGTGTGATCTCAGCACCCAT GACACGCAGCACAAGTTGGGGTGATTTTAGTGTCCGTTTAGCTGGTAAGG ATGGCGCAATGGGTATCCATCGGGCTGGTGTCTTGACTGAAGGAAATGTA GACCTCTAATCCATCACAAGAGCACCAGTGCAGCTGTGAGTGCGAGCCTG TGCTCCCGTTCTAATATTGATATAGAGATGCCGCTCACCAAAGATACATA CATGCTCGTTTGGGATCCATG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9795:6..1426+

>mRNA_D-mesarthrocarpus_Contig9795.1.1 ID=mRNA_D-mesarthrocarpus_Contig9795.1.1|Name=mRNA_D-mesarthrocarpus_Contig9795.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=354bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9795:6..1426+ (Discosporangium mesarthrocarpum MT17_79)
ATGCGCCTGTACCCAATTGCGCTGGTGGTTTGCTGGAGCTGGGCAACAGT
GAACCGCATCCATGAGGCATTAGCACCATATGAGTCAATATTTTGGCTGT
ACGTTCTTCAATACACATTCCAGGCCATGCATGGAGTCCTCAATGCCATT
ATCTTCGCCTTAACCCCAGCTGTTACCAGGGAGTGGGGGGACCAGCTGCG
GAAGTGGGGCCTGGTTGGGGTAGGTCCAACGGTGGACAGTACTGCCCTGT
TGGACCCTTCAGATGTAGTGCCCGTCAGGGAGAGCCAAGGGGCCAGGGTT
GGGGTCCATGAGACACATGCTGGGCGAGAGAGGATGAAGGCTGCAGGAAG
TTGA
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