mRNA_D-mesarthrocarpus_Contig9792.3.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9792.3.1 vs. uniprot
Match: D7FHE5_ECTSI (Serine/threonine protein phosphatase 2A regulatory subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHE5_ECTSI) HSP 1 Score: 110 bits (274), Expect = 4.900e-27 Identity = 49/56 (87.50%), Postives = 52/56 (92.86%), Query Frame = 1 Query: 1 LSHMQDKLFHLLAQCLASQHFQVAERTLFLWNNEHLVNKGCFSRQYTHAILPVIYG 168 L + DKLFHLLAQCLASQHFQVAERTLFLWNNEHLV+KGCFSR YTH+ILPVIYG Sbjct: 310 LQQVHDKLFHLLAQCLASQHFQVAERTLFLWNNEHLVSKGCFSRGYTHSILPVIYG 365
BLAST of mRNA_D-mesarthrocarpus_Contig9792.3.1 vs. uniprot
Match: A0A6H5L4B6_9PHAE (Serine/threonine protein phosphatase 2A regulatory subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4B6_9PHAE) HSP 1 Score: 110 bits (274), Expect = 5.160e-27 Identity = 49/56 (87.50%), Postives = 52/56 (92.86%), Query Frame = 1 Query: 1 LSHMQDKLFHLLAQCLASQHFQVAERTLFLWNNEHLVNKGCFSRQYTHAILPVIYG 168 L + DKLFHLLAQCLASQHFQVAERTLFLWNNEHLV+KGCFSR YTH+ILPVIYG Sbjct: 330 LQQVHDKLFHLLAQCLASQHFQVAERTLFLWNNEHLVSKGCFSRGYTHSILPVIYG 385
BLAST of mRNA_D-mesarthrocarpus_Contig9792.3.1 vs. uniprot
Match: A0A835ZAF4_9STRA (Serine/threonine protein phosphatase 2A regulatory subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAF4_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 1.890e-21 Identity = 43/56 (76.79%), Postives = 47/56 (83.93%), Query Frame = 1 Query: 1 LSHMQDKLFHLLAQCLASQHFQVAERTLFLWNNEHLVNKGCFSRQYTHAILPVIYG 168 L +Q LF LLAQCL SQHFQVAERTLFLWNN+HLV+KGCFSR +T ILPVIYG Sbjct: 298 LQQVQGPLFALLAQCLGSQHFQVAERTLFLWNNDHLVSKGCFSRAHTTTILPVIYG 353
BLAST of mRNA_D-mesarthrocarpus_Contig9792.3.1 vs. uniprot
Match: A0A7S4AV92_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AV92_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 7.600e-19 Identity = 36/56 (64.29%), Postives = 42/56 (75.00%), Query Frame = 1 Query: 1 LSHMQDKLFHLLAQCLASQHFQVAERTLFLWNNEHLVNKGCFSRQYTHAILPVIYG 168 L+ + D LF LA+CL S+HFQV ER LFLWNNEHLVN GC SR A+LP+IYG Sbjct: 6 LAQVSDMLFTNLARCLDSEHFQVVERALFLWNNEHLVNSGCLSRLNAQAVLPIIYG 61
BLAST of mRNA_D-mesarthrocarpus_Contig9792.3.1 vs. uniprot
Match: A0A7S2V448_9STRA (Serine/threonine protein phosphatase 2A regulatory subunit n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V448_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 1.350e-18 Identity = 38/56 (67.86%), Postives = 44/56 (78.57%), Query Frame = 1 Query: 1 LSHMQDKLFHLLAQCLASQHFQVAERTLFLWNNEHLVNKGCFSRQYTHAILPVIYG 168 L ++ LF L+A+CL SQHFQVAER LFLWNNE LVN GC SRQY +ILP+IYG Sbjct: 338 LLQVEQPLFKLIAKCLGSQHFQVAERALFLWNNEQLVNSGCLSRQYASSILPLIYG 393
BLAST of mRNA_D-mesarthrocarpus_Contig9792.3.1 vs. uniprot
Match: A0A1W0A9J9_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A9J9_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 1.570e-18 Identity = 38/56 (67.86%), Postives = 43/56 (76.79%), Query Frame = 1 Query: 1 LSHMQDKLFHLLAQCLASQHFQVAERTLFLWNNEHLVNKGCFSRQYTHAILPVIYG 168 L + LF +LA+CL SQHFQV+ER LFLWNNEHLVN GC SRQ+ ILPVIYG Sbjct: 365 LQQVHKDLFRVLAKCLGSQHFQVSERALFLWNNEHLVNNGCLSRQHASLILPVIYG 420
BLAST of mRNA_D-mesarthrocarpus_Contig9792.3.1 vs. uniprot
Match: A0A397DPI7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DPI7_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 2.410e-18 Identity = 37/56 (66.07%), Postives = 43/56 (76.79%), Query Frame = 1 Query: 1 LSHMQDKLFHLLAQCLASQHFQVAERTLFLWNNEHLVNKGCFSRQYTHAILPVIYG 168 L + LF +L++CL SQHFQV+ER LFLWNNEHLVN GC SRQ+ ILPVIYG Sbjct: 168 LQQIHKDLFRVLSKCLGSQHFQVSERALFLWNNEHLVNNGCLSRQHAALILPVIYG 223
BLAST of mRNA_D-mesarthrocarpus_Contig9792.3.1 vs. uniprot
Match: A0A485LJQ3_9STRA (Serine/threonine protein phosphatase 2A regulatory subunit n=17 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485LJQ3_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 2.730e-18 Identity = 37/56 (66.07%), Postives = 44/56 (78.57%), Query Frame = 1 Query: 1 LSHMQDKLFHLLAQCLASQHFQVAERTLFLWNNEHLVNKGCFSRQYTHAILPVIYG 168 L+ + LF +L++CL SQHFQV+ER LFLWNNEHLVN GC SRQ+ ILPVIYG Sbjct: 372 LTQIHKDLFRVLSKCLGSQHFQVSERALFLWNNEHLVNNGCLSRQHASLILPVIYG 427
BLAST of mRNA_D-mesarthrocarpus_Contig9792.3.1 vs. uniprot
Match: A0A6H5J7C6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7C6_9PHAE) HSP 1 Score: 84.0 bits (206), Expect = 7.550e-18 Identity = 35/56 (62.50%), Postives = 46/56 (82.14%), Query Frame = 1 Query: 1 LSHMQDKLFHLLAQCLASQHFQVAERTLFLWNNEHLVNKGCFSRQYTHAILPVIYG 168 ++ ++D+LF+LLA+C++S+HFQVAER LFLWNNEHLV G S QY +LPVIYG Sbjct: 226 IAEVEDQLFNLLARCISSEHFQVAERALFLWNNEHLVTAGVLSMQYPSPLLPVIYG 281
BLAST of mRNA_D-mesarthrocarpus_Contig9792.3.1 vs. uniprot
Match: K3XB75_GLOUD (Serine/threonine protein phosphatase 2A regulatory subunit n=2 Tax=Pythiaceae TaxID=4782 RepID=K3XB75_GLOUD) HSP 1 Score: 84.7 bits (208), Expect = 9.250e-18 Identity = 37/56 (66.07%), Postives = 43/56 (76.79%), Query Frame = 1 Query: 1 LSHMQDKLFHLLAQCLASQHFQVAERTLFLWNNEHLVNKGCFSRQYTHAILPVIYG 168 L + LF LA+ L SQHFQV+ER+LFLWNNEHLVN GC S+Q+ H ILPVIYG Sbjct: 346 LQQVHKPLFQALAKWLGSQHFQVSERSLFLWNNEHLVNNGCLSKQHAHLILPVIYG 401 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9792.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig9792.3.1 >prot_D-mesarthrocarpus_Contig9792.3.1 ID=prot_D-mesarthrocarpus_Contig9792.3.1|Name=mRNA_D-mesarthrocarpus_Contig9792.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=58bp MQDKLFHLLAQCLASQHFQVAERTLFLWNNEHLVNKGCFSRQYTHAILPVback to top mRNA from alignment at D-mesarthrocarpus_Contig9792:2612..3546- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig9792.3.1 ID=mRNA_D-mesarthrocarpus_Contig9792.3.1|Name=mRNA_D-mesarthrocarpus_Contig9792.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=935bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9792:2612..3546- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9792:2612..3546- >mRNA_D-mesarthrocarpus_Contig9792.3.1 ID=mRNA_D-mesarthrocarpus_Contig9792.3.1|Name=mRNA_D-mesarthrocarpus_Contig9792.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=174bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9792:2612..3546- (Discosporangium mesarthrocarpum MT17_79)back to top |