mRNA_D-mesarthrocarpus_Contig979.3.3 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig979.3.3 vs. uniprot
Match: D7FYP7_ECTSI (CBFD_NFYB_HMF domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYP7_ECTSI) HSP 1 Score: 211 bits (536), Expect = 1.960e-60 Identity = 105/124 (84.68%), Postives = 113/124 (91.13%), Query Frame = 3 Query: 153 GAGIPDTDNEAFLKHMQDLLGKFWGDQMQEMNDLEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQTAIKKTEIFDFLVDVIQ 524 G + D +N A+LK+M++ KFW +QMQEMN LEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQ AI+KTEIFDFLVDVIQ Sbjct: 8 GEPLSDEENAAYLKNMKEQQTKFWAEQMQEMNVLEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTEIFDFLVDVIQ 131
BLAST of mRNA_D-mesarthrocarpus_Contig979.3.3 vs. uniprot
Match: A0A7S2DIM4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DIM4_9STRA) HSP 1 Score: 203 bits (517), Expect = 9.790e-58 Identity = 104/124 (83.87%), Postives = 109/124 (87.90%), Query Frame = 3 Query: 153 GAGIPDTDNEAFLKHMQDLLGKFWGDQMQEMNDLEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQTAIKKTEIFDFLVDVIQ 524 G G + A L MQD+L FW QM+EM+ LEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSE+NKRRTLQKEDIQTAIKKTEIFDFLVDVIQ Sbjct: 10 GVGENEMGETAHLAQMQDMLQGFWQSQMKEMDVLEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEQNKRRTLQKEDIQTAIKKTEIFDFLVDVIQ 133
BLAST of mRNA_D-mesarthrocarpus_Contig979.3.3 vs. uniprot
Match: A0A6V1P6K4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P6K4_HETAK) HSP 1 Score: 201 bits (512), Expect = 2.680e-56 Identity = 97/119 (81.51%), Postives = 110/119 (92.44%), Query Frame = 3 Query: 168 DTDNEAFLKHMQDLLGKFWGDQMQEMNDLEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQTAIKKTEIFDFLVDVIQ 524 D D+ A+L+HMQ LL +FW +QM+EM L+IGTEQDFKNHNDLPL RIKRIMKSDEDVRMI+AEAP+LFAKA EMFILE+TLRSWCYSE+NKRRTLQKEDIQT+I+KTEIFDFLVDVIQ Sbjct: 67 DIDSPAYLQHMQGLLNRFWDEQMREMEALQIGTEQDFKNHNDLPLMRIKRIMKSDEDVRMIAAEAPILFAKATEMFILEITLRSWCYSERNKRRTLQKEDIQTSIRKTEIFDFLVDVIQ 185
BLAST of mRNA_D-mesarthrocarpus_Contig979.3.3 vs. uniprot
Match: A0A7S2SRM6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRM6_9STRA) HSP 1 Score: 199 bits (506), Expect = 5.370e-56 Identity = 102/135 (75.56%), Postives = 113/135 (83.70%), Query Frame = 3 Query: 120 GEVMQNADVGSGAGIPDTDNEAFLKHMQDLLGKFWGDQMQEMNDLEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQTAIKKTEIFDFLVDVIQ 524 G +A+ GA +P D+ + HM+ +L FW Q QEM+ L IGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSE+NKRRTLQKEDIQTAI++TEIFDFLVDVIQ Sbjct: 14 GAFASSAEGMMGAEVP-ADSAQHIAHMRQMLRNFWQTQQQEMDTLAIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEQNKRRTLQKEDIQTAIRRTEIFDFLVDVIQ 147
BLAST of mRNA_D-mesarthrocarpus_Contig979.3.3 vs. uniprot
Match: D7FYP6_ECTSI (CBFD_NFYB_HMF domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYP6_ECTSI) HSP 1 Score: 196 bits (497), Expect = 3.110e-55 Identity = 96/112 (85.71%), Postives = 103/112 (91.96%), Query Frame = 3 Query: 189 LKHMQDLLGKFWGDQMQEMNDLEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQTAIKKTEIFDFLVDVIQ 524 +K+MQ L +FW +QMQEM LEIGTEQDFKNHNDLPLARIKRIMK DEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQ AI+KT+IFDFLV VI+ Sbjct: 1 MKNMQSQLNRFWAEQMQEMETLEIGTEQDFKNHNDLPLARIKRIMKCDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTDIFDFLVHVIE 112
BLAST of mRNA_D-mesarthrocarpus_Contig979.3.3 vs. uniprot
Match: A0A836C8W6_9STRA (Histone-fold-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8W6_9STRA) HSP 1 Score: 185 bits (470), Expect = 2.860e-51 Identity = 94/117 (80.34%), Postives = 103/117 (88.03%), Query Frame = 3 Query: 174 DNEAFLKHMQDLLGKFWGDQMQEMNDLEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQTAIKKTEIFDFLVDVIQ 524 D+ AFL ++ L +FWG+QMQEM LEI TEQ FK HNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSW YSEKNKRRTL KEDIQ AI+KT++FDFLV+VIQ Sbjct: 11 DSPAFLANLHAGLAQFWGEQMQEMEVLEISTEQAFKVHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWAYSEKNKRRTLTKEDIQEAIEKTDVFDFLVEVIQ 127
BLAST of mRNA_D-mesarthrocarpus_Contig979.3.3 vs. uniprot
Match: K3WAN7_GLOUD (CBFD_NFYB_HMF domain-containing protein n=25 Tax=Oomycota TaxID=4762 RepID=K3WAN7_GLOUD) HSP 1 Score: 186 bits (471), Expect = 2.960e-51 Identity = 97/137 (70.80%), Postives = 110/137 (80.29%), Query Frame = 3 Query: 117 IGEVMQNADVGSGAGIPDTDNEA--FLKHMQDLLGKFWGDQMQEMNDLEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQTAIKKTEIFDFLVDVI 521 + + M++ D+ G + T+ E M+ L FW Q+QEM LE+G+EQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSW YSEKNKRRTLQKEDIQTAI+ T+IFDFLVDVI Sbjct: 1 MSDSMRDNDLMEGQVVELTEAEQAQHQAQMEQQLKSFWAKQLQEMEQLEVGSEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWGYSEKNKRRTLQKEDIQTAIRNTDIFDFLVDVI 137
BLAST of mRNA_D-mesarthrocarpus_Contig979.3.3 vs. uniprot
Match: W4HC48_9STRA (CBFD_NFYB_HMF domain-containing protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=W4HC48_9STRA) HSP 1 Score: 185 bits (469), Expect = 4.330e-51 Identity = 93/116 (80.17%), Postives = 101/116 (87.07%), Query Frame = 3 Query: 174 DNEAFLKHMQDLLGKFWGDQMQEMNDLEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQTAIKKTEIFDFLVDVI 521 ++ A L M+ L FW Q+ EM LE+G+EQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSW YSEKNKRRTLQKEDIQTAI+ T+IFDFLVDVI Sbjct: 14 EHAAHLAQMEQQLKVFWAGQLAEMEKLEVGSEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWGYSEKNKRRTLQKEDIQTAIRNTDIFDFLVDVI 129
BLAST of mRNA_D-mesarthrocarpus_Contig979.3.3 vs. uniprot
Match: A0A812R7W0_SYMMI (NFYC2 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812R7W0_SYMMI) HSP 1 Score: 185 bits (469), Expect = 5.250e-51 Identity = 92/116 (79.31%), Postives = 100/116 (86.21%), Query Frame = 3 Query: 165 PDTDNEAFLKHMQDLLGKFWGDQMQEMNDLEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQTAIKKTEIFDFLV 512 P+ +H+Q L +FW +Q+ EMN LEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEK KRRTLQK+DI+ AIK TEIFDFLV Sbjct: 16 PEITEAMHQEHLQKALHQFWMEQIAEMNALEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKMKRRTLQKDDIEAAIKNTEIFDFLV 131
BLAST of mRNA_D-mesarthrocarpus_Contig979.3.3 vs. uniprot
Match: A0A067D1Y5_SAPPC (CBFD_NFYB_HMF domain-containing protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067D1Y5_SAPPC) HSP 1 Score: 183 bits (465), Expect = 1.550e-50 Identity = 92/116 (79.31%), Postives = 101/116 (87.07%), Query Frame = 3 Query: 174 DNEAFLKHMQDLLGKFWGDQMQEMNDLEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQTAIKKTEIFDFLVDVI 521 ++ A + M+ L FW Q+ EM LE+G+EQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSW YSEKNKRRTLQKEDIQTAI+ T+IFDFLVDVI Sbjct: 14 EHAAHMAQMEAQLKVFWAGQLAEMEKLEVGSEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWGYSEKNKRRTLQKEDIQTAIRNTDIFDFLVDVI 129 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig979.3.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig979.3.3 >prot_D-mesarthrocarpus_Contig979.3.3 ID=prot_D-mesarthrocarpus_Contig979.3.3|Name=mRNA_D-mesarthrocarpus_Contig979.3.3|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=133bp MQNADVGSGAGIPDTDNEAFLKHMQDLLGKFWGDQMQEMNDLEIGTEQDFback to top mRNA from alignment at D-mesarthrocarpus_Contig979:15832..19724- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig979.3.3 ID=mRNA_D-mesarthrocarpus_Contig979.3.3|Name=mRNA_D-mesarthrocarpus_Contig979.3.3|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3893bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig979:15832..19724- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig979:15832..19724- >mRNA_D-mesarthrocarpus_Contig979.3.3 ID=mRNA_D-mesarthrocarpus_Contig979.3.3|Name=mRNA_D-mesarthrocarpus_Contig979.3.3|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=399bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig979:15832..19724- (Discosporangium mesarthrocarpum MT17_79)back to top |