mRNA_D-mesarthrocarpus_Contig979.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig979.2.1 vs. uniprot
Match: D7FYP5_ECTSI (ADF-H domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYP5_ECTSI) HSP 1 Score: 220 bits (560), Expect = 2.330e-65 Identity = 105/138 (76.09%), Postives = 123/138 (89.13%), Query Frame = 1 Query: 1 TGVTVSDVAVDQFNAFKLHRVPFNHRYFIYKVEG-AEIVVDSFGEKSKTYDDFCAALPPDECRYGVFDLDFHSRDGRPTNKLIFITWTPDTAPVKTKMIYAGSKEAIKSALVGIGVHLQATDQGELELDYIKSQVLRV 411 TGVTV+D AV+ FNAFKLHR P ++RYFIYK+E AEI+VD+FG+K+KTYDDF A LPP+ECRYGVFDLDF +RDGR NKLIFI+W+PDTA +K KM+YA SKEAIKSAL+GIG+HLQATDQGELELDYIKSQV +V Sbjct: 3 TGVTVNDEAVEMFNAFKLHRAPHDNRYFIYKIENDAEIIVDTFGDKTKTYDDFTACLPPNECRYGVFDLDFTTRDGREANKLIFISWSPDTAKIKNKMVYAASKEAIKSALMGIGIHLQATDQGELELDYIKSQVQKV 140
BLAST of mRNA_D-mesarthrocarpus_Contig979.2.1 vs. uniprot
Match: A0A836CHD0_9STRA (ADF-H domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHD0_9STRA) HSP 1 Score: 183 bits (465), Expect = 1.720e-51 Identity = 86/139 (61.87%), Postives = 108/139 (77.70%), Query Frame = 1 Query: 1 TGVTVSDVAVDQFNAFKLHRVPFNHRYFIYKVE--GAEIVVDSFGEKSKTYDDFCAALPPDECRYGVFDLDFHSRDGRPTNKLIFITWTPDTAPVKTKMIYAGSKEAIKSALVGIGVHLQATDQGELELDYIKSQVLRV 411 TG+ V+D V QFN FKL + P N+RY++YK+ G EIV+D+FGE+ TYDDFC+ LPP ECRYG+FDLD+ ++DGR ++KL+FI WTPD A VK KM+YAGSKE+IK ALVG+GVHLQA D ELEL I S V R+ Sbjct: 3 TGIIVNDEVVTQFNLFKLKKEPCNYRYYVYKISDNGQEIVIDTFGERDATYDDFCSKLPPKECRYGLFDLDYDTKDGRSSSKLVFIAWTPDEAAVKNKMMYAGSKESIKGALVGVGVHLQACDASELELATILSSVQRI 141
BLAST of mRNA_D-mesarthrocarpus_Contig979.2.1 vs. uniprot
Match: A0A836C9C2_9STRA (ADF-H domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9C2_9STRA) HSP 1 Score: 183 bits (464), Expect = 1.500e-48 Identity = 87/140 (62.14%), Postives = 110/140 (78.57%), Query Frame = 1 Query: 1 TGVTVSDVAVDQFNAFKLHRVPFNHRYFIYKVE--GAEIVVDSFGEKSKTYDDFCAALPPDECRYGVFDLDFHSR-DGRPTNKLIFITWTPDTAPVKTKMIYAGSKEAIKSALVGIGVHLQATDQGELELDYIKSQVLRV 411 TGV+V+D V QFN FKL + P NHR++IYK+ GAEIV+D FG + KTYDDF A LPP+ECRYG+FDL++ ++ + RP KLI I WTPDTA +K KM+YAGSK+A+KSALVG+G+HLQATD ELEL YI + V R+ Sbjct: 221 TGVSVNDAVVTQFNNFKLKKEPDNHRFYIYKISDNGAEIVIDQFGTREKTYDDFVACLPPNECRYGLFDLEYTTKTESRPVEKLILIAWTPDTAKIKNKMMYAGSKDALKSALVGVGIHLQATDASELELQYIINSVSRI 360
BLAST of mRNA_D-mesarthrocarpus_Contig979.2.1 vs. uniprot
Match: A0A067C057_SAPPC (ADF-H domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C057_SAPPC) HSP 1 Score: 164 bits (416), Expect = 2.010e-44 Identity = 81/137 (59.12%), Postives = 105/137 (76.64%), Query Frame = 1 Query: 1 TGVTVSDVAVDQFNAFKLHRVPFNHRYFIYKVEG-AEIVVDSFGEKSKTYDDFCAAL--PPDECRYGVFDLDFHSRDGRPTNKLIFITWTPDTAPVKTKMIYAGSKEAIKSALVGIGVHLQATDQGELELDYIKSQV 402 +GV VSD V +FN FKL + P+N RYFIYK+EG +EIV++ GE+S+TYDDF A L +ECRYG+ DLDF ++DGRPT+KL+FI+W+PDTA VK+KM+YA SKEAIK LVG+G++L ATD EL I+ V Sbjct: 3 SGVGVSDDVVTEFNDFKLQKAPYNFRYFIYKIEGDSEIVIEHRGERSETYDDFAAKLNATTNECRYGLIDLDFTTKDGRPTSKLVFISWSPDTARVKSKMLYASSKEAIKRGLVGVGIYLSATDASELSFSSIQDGV 139
BLAST of mRNA_D-mesarthrocarpus_Contig979.2.1 vs. uniprot
Match: A0A6T5XBY3_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A6T5XBY3_9STRA) HSP 1 Score: 159 bits (402), Expect = 1.920e-42 Identity = 74/129 (57.36%), Postives = 97/129 (75.19%), Query Frame = 1 Query: 1 TGVTVSDVAVDQFNAFKLHRVPFNHRYFIYKVEGA-EIVVDSFGEKSKTYDDFCAALPPDECRYGVFDLDFHSRDGRPTNKLIFITWTPDTAPVKTKMIYAGSKEAIKSALVGIGVHLQATDQGELELD 384 TGV D + F FKL + PF RYFIY ++ EIV++ GE+ KTYDDF LP ++CRYG+ DL+F S DGRPT+KL+FITW PDTAP+++KM+Y+GSKEAIKSALVG+G+ + ATD EL+L+ Sbjct: 3 TGVRCHDDVAEAFTKFKLQQEPFKLRYFIYVIKDKKEIVIEKQGEREKTYDDFVENLPENDCRYGLLDLEFESDDGRPTSKLVFITWNPDTAPIRSKMLYSGSKEAIKSALVGVGIQINATDASELDLE 131
BLAST of mRNA_D-mesarthrocarpus_Contig979.2.1 vs. uniprot
Match: A0A1V9ZSG9_9STRA (Actin-depolymerizing factor n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZSG9_9STRA) HSP 1 Score: 159 bits (401), Expect = 2.930e-42 Identity = 76/137 (55.47%), Postives = 103/137 (75.18%), Query Frame = 1 Query: 1 TGVTVSDVAVDQFNAFKLHRVPFNHRYFIYKVEGA-EIVVDSFGEKSKTYDDFCAALPP--DECRYGVFDLDFHSRDGRPTNKLIFITWTPDTAPVKTKMIYAGSKEAIKSALVGIGVHLQATDQGELELDYIKSQV 402 +GV V D V +FN FKL R P+N RYFIYK+E + E+V++ GE+++TY+DF L DECRYG+ DLDF ++DGRPT+KL+FI+W+PDTA +K+KM+YA SKEAIK LVG+G++L ATD EL + I+ V Sbjct: 5 SGVGVHDDVVTEFNDFKLQRAPYNFRYFIYKIENSSEVVIEHRGERTETYEDFATKLKSIGDECRYGLIDLDFTTKDGRPTSKLVFISWSPDTAKIKSKMLYASSKEAIKRCLVGVGIYLSATDASELSMAAIEDGV 141
BLAST of mRNA_D-mesarthrocarpus_Contig979.2.1 vs. uniprot
Match: K0SV25_THAOC (ADF-H domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SV25_THAOC) HSP 1 Score: 157 bits (397), Expect = 9.860e-42 Identity = 70/129 (54.26%), Postives = 99/129 (76.74%), Query Frame = 1 Query: 1 TGVTVSDVAVDQFNAFKLHRVPFNHRYFIYKVEGA-EIVVDSFGEKSKTYDDFCAALPPDECRYGVFDLDFHSRDGRPTNKLIFITWTPDTAPVKTKMIYAGSKEAIKSALVGIGVHLQATDQGELELD 384 TGV VSD FN FKL + P+ RYFIY+++ EIV+ S G++SKTY+DF LP ++CRYG+ D++F + DGRPT+K++FI+W PDTA ++ KM+Y+GSKEA+KSALVG+G+H+ ATD EL+ + Sbjct: 3 TGVAVSDEVSTSFNKFKLGQEPYKLRYFIYEIKNKKEIVISSQGDRSKTYEDFVEELPENDCRYGLIDIEFETDDGRPTSKIVFISWNPDTASIRPKMLYSGSKEALKSALVGVGIHINATDHSELDFE 131
BLAST of mRNA_D-mesarthrocarpus_Contig979.2.1 vs. uniprot
Match: A0A4D9D6Y0_9STRA (ADF-H domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D6Y0_9STRA) HSP 1 Score: 157 bits (396), Expect = 1.280e-41 Identity = 70/136 (51.47%), Postives = 98/136 (72.06%), Query Frame = 1 Query: 1 TGVTVSDVAVDQFNAFKLHRVPFNHRYFIYKVEGAEIVVDSFGEKSKTYDDFCAALPPDECRYGVFDLDFHSRDGRPTNKLIFITWTPDTAPVKTKMIYAGSKEAIKSALVGIGVHLQATDQGELELDYIKSQVLR 408 TGV +D F+ FKL R P+N RY +Y+++ +I ++ G + K ++DFCA LP +CRY V D++F + DGRPT+K+IF++W PDTA V++KM+YAGSKEAIK ALVG+G+HL ATD+ ELE + I V R Sbjct: 3 TGVEAADEVGSSFSQFKLQRAPYNVRYIVYEIKEDKIQIEKQGAREKNWEDFCADLPESDCRYAVIDVEFETDDGRPTSKIIFLSWAPDTAKVRSKMVYAGSKEAIKRALVGVGIHLNATDRSELEFEQILPSVKR 138
BLAST of mRNA_D-mesarthrocarpus_Contig979.2.1 vs. uniprot
Match: A0A7S1D6V8_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D6V8_CYCTE) HSP 1 Score: 157 bits (396), Expect = 1.370e-41 Identity = 74/129 (57.36%), Postives = 96/129 (74.42%), Query Frame = 1 Query: 1 TGVTVSDVAVDQFNAFKLHRVPFNHRYFIYKVEGAE-IVVDSFGEKSKTYDDFCAALPPDECRYGVFDLDFHSRDGRPTNKLIFITWTPDTAPVKTKMIYAGSKEAIKSALVGIGVHLQATDQGELELD 384 TGV V D FN FKL R F RYFIY +E + IV++ GE+SKTYDDF A LP ++CRYG+ DL+F + DGRPT+K++FI+W PDTA V+ KM+Y+GSKEAIKS L G+G+H+ ATD EL+L+ Sbjct: 3 TGVIVGDDVSFAFNEFKLQRGDFKLRYFIYSIENKKTIVIEKQGERSKTYDDFVADLPENDCRYGLIDLEFETDDGRPTSKIVFISWNPDTASVRPKMLYSGSKEAIKSVLTGVGIHINATDYSELDLE 131
BLAST of mRNA_D-mesarthrocarpus_Contig979.2.1 vs. uniprot
Match: A0A1V9ZGW8_9STRA (Actin-depolymerizing factor n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZGW8_9STRA) HSP 1 Score: 156 bits (395), Expect = 1.900e-41 Identity = 74/136 (54.41%), Postives = 100/136 (73.53%), Query Frame = 1 Query: 1 TGVTVSDVAVDQFNAFKLHRVPFNHRYFIYKVEGAEIVVDSFGEKSKTYDDFCAALPP--DECRYGVFDLDFHSRDGRPTNKLIFITWTPDTAPVKTKMIYAGSKEAIKSALVGIGVHLQATDQGELELDYIKSQV 402 +GV V D + +FN FKL R P+N RYFIYK+E EIV++ GE+S++Y+DF L ECRYG+ DLDF ++DGRPT+KL+FI+W+PDT+ +K+KM+YA SKEAIK LVG+G++L ATD EL I+ V Sbjct: 3 SGVGVHDDVISEFNDFKLQRAPYNFRYFIYKIEHDEIVIEHRGERSESYEDFANKLLEIQSECRYGLIDLDFTTKDGRPTSKLVFISWSPDTSKIKSKMVYASSKEAIKRCLVGVGIYLSATDASELAFSAIEDGV 138 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig979.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig979.2.1 >prot_D-mesarthrocarpus_Contig979.2.1 ID=prot_D-mesarthrocarpus_Contig979.2.1|Name=mRNA_D-mesarthrocarpus_Contig979.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=42bp MIYAGSKEAIKSALVGIGVHLQATDQGELELDYIKSQVLRV*back to top mRNA from alignment at D-mesarthrocarpus_Contig979:10420..12305+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig979.2.1 ID=mRNA_D-mesarthrocarpus_Contig979.2.1|Name=mRNA_D-mesarthrocarpus_Contig979.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1886bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig979:10420..12305+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig979:10420..12305+ >mRNA_D-mesarthrocarpus_Contig979.2.1 ID=mRNA_D-mesarthrocarpus_Contig979.2.1|Name=mRNA_D-mesarthrocarpus_Contig979.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=126bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig979:10420..12305+ (Discosporangium mesarthrocarpum MT17_79)back to top |