mRNA_D-mesarthrocarpus_Contig9768.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9768.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig9768.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9768.1.1 vs. uniprot
Match: A0A2E9JF65_9GAMM (DNA-binding response regulator n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E9JF65_9GAMM)

HSP 1 Score: 405 bits (1040), Expect = 1.430e-140
Identity = 201/270 (74.44%), Postives = 232/270 (85.93%), Query Frame = 1
Query:    1 QRDPNVLTAIIVDDEDLARQGLAMRLKELAGVELLAECGNAREAISAISEHEPDVVFLDIQMPGKSGLEMISEIQGDIMPMVIFVTAYDDYAVEAFKVHAVDYLLKPVESDRLKEAVDIARGLKARDSLHDEKEKLMGMVVSLTGKSPAAIGQMMTEGEDLVEQPDRLAIKDGSSITFVPVRDIDWIDAAGDYMCVHVQGQTHIMRTTMKELESKLDPTLFQRVHRSTIVNLERVEKVSSHINGEFHLTLKCGTSLKMSRSYKDKVKHFF 810
            Q D   LTA+IVDDE+LAR+GLAMRL+EL GV++L  C N REAI AI E EPDVVFLDIQMPG +G E+ISEIQGD+MPMVIFVTAYD +AV+AF VHA+DYLLKPVE +RL +A+  A  ++ + S   EK KL+ + VSLTGKS AAIG+++  GEDL+EQ DRLAIKDGSSITFVPV DIDWIDAAGDYMCVH +G THIMRTTMKELE++LDP++FQRVHRSTIVNLERVEKVSSHINGEFHLTL CG+SLKMSRSYK+KVKHFF
Sbjct:    3 QNDQQKLTALIVDDEELARKGLAMRLEELGGVDVLKHCKNGREAIEAIIEFEPDVVFLDIQMPGMTGFELISEIQGDVMPMVIFVTAYDAFAVDAFDVHAIDYLLKPVEKERLADAISKATQVREQHSALHEKRKLLDLAVSLTGKSSAAIGELLASGEDLLEQADRLAIKDGSSITFVPVHDIDWIDAAGDYMCVHAKGVTHIMRTTMKELEARLDPSIFQRVHRSTIVNLERVEKVSSHINGEFHLTLSCGSSLKMSRSYKEKVKHFF 272          
BLAST of mRNA_D-mesarthrocarpus_Contig9768.1.1 vs. uniprot
Match: A0A3B9X4B8_9GAMM (DNA-binding response regulator n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3B9X4B8_9GAMM)

HSP 1 Score: 397 bits (1020), Expect = 1.190e-137
Identity = 194/264 (73.48%), Postives = 229/264 (86.74%), Query Frame = 1
Query:   19 LTAIIVDDEDLARQGLAMRLKELAGVELLAECGNAREAISAISEHEPDVVFLDIQMPGKSGLEMISEIQGDIMPMVIFVTAYDDYAVEAFKVHAVDYLLKPVESDRLKEAVDIARGLKARDSLHDEKEKLMGMVVSLTGKSPAAIGQMMTEGEDLVEQPDRLAIKDGSSITFVPVRDIDWIDAAGDYMCVHVQGQTHIMRTTMKELESKLDPTLFQRVHRSTIVNLERVEKVSSHINGEFHLTLKCGTSLKMSRSYKDKVKHFF 810
            + AIIVDDEDLARQG+A+RL ++ GV ++AEC N +EA+ AI EHEPD+ FLDIQMP  +G E+ISEIQ DI+P++IFVTAYD +A++AFKVHA+DYLLKPVE DRL  A++ AR  K + S   EK++LM +VVS+TGKS +AI +++   EDLVE  DRLAIKDGSSITFVPVRDIDW+DAAGDYMCVHVQG+THIMRTTMKELESKLDP +FQRVHRSTIVNLERVEKVSSHINGEFHLTL CG+SLKMSRSYK+KVKHFF
Sbjct:    1 MKAIIVDDEDLARQGMALRLAKIEGVSVVAECANGKEALMAIIEHEPDIAFLDIQMPVMTGFELISEIQSDILPLIIFVTAYDAFAIDAFKVHAIDYLLKPVEEDRLILAIEKARKAKEQHSALSEKQRLMELVVSVTGKSSSAIAELLDSDEDLVEHADRLAIKDGSSITFVPVRDIDWVDAAGDYMCVHVQGKTHIMRTTMKELESKLDPAIFQRVHRSTIVNLERVEKVSSHINGEFHLTLSCGSSLKMSRSYKEKVKHFF 264          
BLAST of mRNA_D-mesarthrocarpus_Contig9768.1.1 vs. uniprot
Match: A0A354TTQ3_9GAMM (DNA-binding response regulator n=10 Tax=unclassified Gammaproteobacteria TaxID=33811 RepID=A0A354TTQ3_9GAMM)

HSP 1 Score: 393 bits (1009), Expect = 7.460e-136
Identity = 196/270 (72.59%), Postives = 230/270 (85.19%), Query Frame = 1
Query:    1 QRDPNVLTAIIVDDEDLARQGLAMRLKELAGVELLAECGNAREAISAISEHEPDVVFLDIQMPGKSGLEMISEIQGDIMPMVIFVTAYDDYAVEAFKVHAVDYLLKPVESDRLKEAVDIARGLKARDSLHDEKEKLMGMVVSLTGKSPAAIGQMMTEGEDLVEQPDRLAIKDGSSITFVPVRDIDWIDAAGDYMCVHVQGQTHIMRTTMKELESKLDPTLFQRVHRSTIVNLERVEKVSSHINGEFHLTLKCGTSLKMSRSYKDKVKHFF 810
            + D N L A++VDDE LAR+GLA+RL+E+A V++L +C N REA+ AI+E EPDV+FLDIQMPG +G E+ISE+QGD+MPMVIFVTAYD +AV+AFKVHAVDYLLKPVE +RL+EAV      KA    + EK++L+ MVVSL+GKS AAI  ++  G++L EQ DRLAIKDGSSITFVPVRDIDWIDAAGDYMCVH  G THIMRTTMK+LE+KLD T+FQRVHRSTIVNLERV+KVSSHINGEFHLTL CGT LKMSRSYKDKVKHFF
Sbjct:    3 ENDINTLKALVVDDEQLAREGLALRLEEMAEVKILKQCANGREAMEAIAELEPDVLFLDIQMPGMTGFELISEVQGDVMPMVIFVTAYDSFAVDAFKVHAVDYLLKPVEKERLQEAVAKCLENKAVRVANKEKQRLLEMVVSLSGKSEAAISNILESGDELREQVDRLAIKDGSSITFVPVRDIDWIDAAGDYMCVHANGDTHIMRTTMKDLEAKLDSTIFQRVHRSTIVNLERVDKVSSHINGEFHLTLSCGTLLKMSRSYKDKVKHFF 272          
BLAST of mRNA_D-mesarthrocarpus_Contig9768.1.1 vs. uniprot
Match: A0A2D8N4U5_9GAMM (DNA-binding response regulator n=2 Tax=root TaxID=1 RepID=A0A2D8N4U5_9GAMM)

HSP 1 Score: 391 bits (1004), Expect = 4.620e-135
Identity = 191/264 (72.35%), Postives = 231/264 (87.50%), Query Frame = 1
Query:   19 LTAIIVDDEDLARQGLAMRLKELAGVELLAECGNAREAISAISEHEPDVVFLDIQMPGKSGLEMISEIQGDIMPMVIFVTAYDDYAVEAFKVHAVDYLLKPVESDRLKEAVDIARGLKARDSLHDEKEKLMGMVVSLTGKSPAAIGQMMTEGEDLVEQPDRLAIKDGSSITFVPVRDIDWIDAAGDYMCVHVQGQTHIMRTTMKELESKLDPTLFQRVHRSTIVNLERVEKVSSHINGEFHLTLKCGTSLKMSRSYKDKVKHFF 810
            LT IIVDDE+LAR+GLAMRL+E++G+E+L +C NAREA+ AI++HEPD+ FLDIQMPG SG E+I EIQGDIMPM++FVTA+D++AV AF VHAVDYLLKPVESDRLKEA++ A+ LK +     EK+KL+ + VSLTGKS  AIG ++  GEDLVEQPD+LAIKDG+++T VPV+DIDWIDAAGDYMCVH +G+THIMRTTMKELE++L P++FQRVHRSTIVNL RVEK+SSHINGEFHL L  G SLKMSRSYK+KVKHFF
Sbjct:    9 LTVIIVDDEELARRGLAMRLEEVSGLEILEQCQNAREALDAINKHEPDLAFLDIQMPGMSGFELIGEIQGDIMPMIVFVTAFDEFAVAAFNVHAVDYLLKPVESDRLKEAINKAQQLKIQRKTLGEKQKLLELAVSLTGKSSDAIGVLLESGEDLVEQPDQLAIKDGTTLTLVPVKDIDWIDAAGDYMCVHAKGETHIMRTTMKELEARLAPSIFQRVHRSTIVNLLRVEKISSHINGEFHLILNGGISLKMSRSYKNKVKHFF 272          
BLAST of mRNA_D-mesarthrocarpus_Contig9768.1.1 vs. uniprot
Match: A0A2E9ZM13_9GAMM (DNA-binding response regulator n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E9ZM13_9GAMM)

HSP 1 Score: 389 bits (999), Expect = 2.480e-134
Identity = 194/267 (72.66%), Postives = 225/267 (84.27%), Query Frame = 1
Query:   10 PNVLTAIIVDDEDLARQGLAMRLKELAGVELLAECGNAREAISAISEHEPDVVFLDIQMPGKSGLEMISEIQGDIMPMVIFVTAYDDYAVEAFKVHAVDYLLKPVESDRLKEAVDIARGLKARDSLHDEKEKLMGMVVSLTGKSPAAIGQMMTEGEDLVEQPDRLAIKDGSSITFVPVRDIDWIDAAGDYMCVHVQGQTHIMRTTMKELESKLDPTLFQRVHRSTIVNLERVEKVSSHINGEFHLTLKCGTSLKMSRSYKDKVKHFF 810
            P  LTAIIVDDE LARQGLAMRL+E   V ++  C N REAI+AI +HEPDVVFLD+QMPG SG +MI EIQ DIMPM+IFVTAYD +AV+AF+ HAVDYLLKPVE +RL+EA+  A   K + S+ +EK++LMG+VV LTGKS AAI +M+   E  VE  DRLAIKDGSSITFVP++DIDW+DAAGDYMCVHV G THIMRTTMK+LESKLDP++FQRVHRSTIVNL +VEKVSSHINGEFHL+L CG SLKMSRSYK+KVKHFF
Sbjct:    6 PPNLTAIIVDDEGLARQGLAMRLQEFPQVSIVQICKNGREAIAAIIKHEPDVVFLDVQMPGMSGFKMIREIQADIMPMIIFVTAYDAFAVDAFEAHAVDYLLKPVEKERLQEALSKAAQRKTQQSVENEKQRLMGLVVKLTGKSSAAIDEMLDADEQAVEHADRLAIKDGSSITFVPIKDIDWVDAAGDYMCVHVAGVTHIMRTTMKDLESKLDPSIFQRVHRSTIVNLRQVEKVSSHINGEFHLSLSCGASLKMSRSYKEKVKHFF 272          
BLAST of mRNA_D-mesarthrocarpus_Contig9768.1.1 vs. uniprot
Match: A0A3C0EXM8_9GAMM (DNA-binding response regulator n=3 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3C0EXM8_9GAMM)

HSP 1 Score: 389 bits (999), Expect = 2.660e-134
Identity = 187/264 (70.83%), Postives = 234/264 (88.64%), Query Frame = 1
Query:   19 LTAIIVDDEDLARQGLAMRLKELAGVELLAECGNAREAISAISEHEPDVVFLDIQMPGKSGLEMISEIQGDIMPMVIFVTAYDDYAVEAFKVHAVDYLLKPVESDRLKEAVDIARGLKARDSLHDEKEKLMGMVVSLTGKSPAAIGQMMTEGEDLVEQPDRLAIKDGSSITFVPVRDIDWIDAAGDYMCVHVQGQTHIMRTTMKELESKLDPTLFQRVHRSTIVNLERVEKVSSHINGEFHLTLKCGTSLKMSRSYKDKVKHFF 810
            LT IIVDDE+LARQGLAMRL+E++ +E+LA+C N REA++AI+E+EPD+ FLDIQMPG SGLE+I EIQGD+MPM++FVTA+D++AV+AF VHAVDYLLKPVES+RLKEA++ A+ LK ++    +K+KL+ +  SL+GKS  AIG+++  G+DL+E  DRLAIKDG+S+TFVPV+DIDWIDAAGDYMCVH +G+THIMRTTMKELE++L P++FQRVHRSTIVNLERVEK+SSHINGEFHL L  G SLKMSRSYK+KVKHFF
Sbjct:    9 LTTIIVDDEELARQGLAMRLEEVSEIEILAQCQNGREALNAINEYEPDLAFLDIQMPGTSGLELIGEIQGDVMPMIVFVTAFDEFAVDAFDVHAVDYLLKPVESNRLKEAINKAQKLKMQEGALGDKQKLLELAASLSGKSLDAIGELLESGDDLIEHADRLAIKDGTSLTFVPVKDIDWIDAAGDYMCVHAKGETHIMRTTMKELEARLAPSIFQRVHRSTIVNLERVEKISSHINGEFHLILGGGISLKMSRSYKNKVKHFF 272          
BLAST of mRNA_D-mesarthrocarpus_Contig9768.1.1 vs. uniprot
Match: A0A2A4XFL5_9GAMM (DNA-binding response regulator n=1 Tax=SAR86 cluster bacterium TaxID=2030880 RepID=A0A2A4XFL5_9GAMM)

HSP 1 Score: 389 bits (998), Expect = 3.520e-134
Identity = 190/268 (70.90%), Postives = 229/268 (85.45%), Query Frame = 1
Query:    7 DPNVLTAIIVDDEDLARQGLAMRLKELAGVELLAECGNAREAISAISEHEPDVVFLDIQMPGKSGLEMISEIQGDIMPMVIFVTAYDDYAVEAFKVHAVDYLLKPVESDRLKEAVDIARGLKARDSLHDEKEKLMGMVVSLTGKSPAAIGQMMTEGEDLVEQPDRLAIKDGSSITFVPVRDIDWIDAAGDYMCVHVQGQTHIMRTTMKELESKLDPTLFQRVHRSTIVNLERVEKVSSHINGEFHLTLKCGTSLKMSRSYKDKVKHFF 810
            D N L AIIVDDE+LARQGL MRL     VE++  C NA+EA+ AI+E EPD+VFLDIQMPGK+G+EMI EIQ DI+PM+IFVTAYD +AV+AF++HA+DYLLKPVE++RL EAV+ A   K++  +  EK++L+ ++VSLTGKSP AIG+++ + +   E  DRLAIKDGSSITFVP++DIDW+DAAGDYMCVHV G THIMRTTMKELESKLDP++FQRVHRSTIVNL RVEKVSSHINGEFHLTL CG+SLKMSRSYK+KVKHFF
Sbjct:    5 DSNKLKAIIVDDEELARQGLEMRLSGFDNVEIVKSCANAKEALKAIAELEPDLVFLDIQMPGKTGVEMIREIQSDILPMIIFVTAYDSFAVDAFEMHAIDYLLKPVENERLLEAVEKAWQHKSQVGVASEKQRLLNLLVSLTGKSPTAIGELLDDEDQSTEHADRLAIKDGSSITFVPIKDIDWVDAAGDYMCVHVDGATHIMRTTMKELESKLDPSIFQRVHRSTIVNLRRVEKVSSHINGEFHLTLSCGSSLKMSRSYKEKVKHFF 272          
BLAST of mRNA_D-mesarthrocarpus_Contig9768.1.1 vs. uniprot
Match: A0A2A5B9I5_9GAMM (DNA-binding response regulator n=1 Tax=SAR86 cluster bacterium TaxID=2030880 RepID=A0A2A5B9I5_9GAMM)

HSP 1 Score: 385 bits (989), Expect = 8.250e-133
Identity = 189/270 (70.00%), Postives = 229/270 (84.81%), Query Frame = 1
Query:    1 QRDPNVLTAIIVDDEDLARQGLAMRLKELAGVELLAECGNAREAISAISEHEPDVVFLDIQMPGKSGLEMISEIQGDIMPMVIFVTAYDDYAVEAFKVHAVDYLLKPVESDRLKEAVDIARGLKARDSLHDEKEKLMGMVVSLTGKSPAAIGQMMTEGEDLVEQPDRLAIKDGSSITFVPVRDIDWIDAAGDYMCVHVQGQTHIMRTTMKELESKLDPTLFQRVHRSTIVNLERVEKVSSHINGEFHLTLKCGTSLKMSRSYKDKVKHFF 810
            Q +   L  IIVDDE+LARQGL MRL+    VE++A C NA+EA+ AI EHEPD+VFLDIQMPGK+G EMI EIQ DI+PM+IFVTAYD +AV+AF++HAVDYLLKPVE++RL +A+  A   K++ S+ DEK++L+ +VVS+TGKSP AI +++   E+  E  DRLAIKDGSSITFVP++DIDWIDAAGDYMCVHV G  HIMRTTMKELE+KLDP++FQRVHRSTIVNL+RVEKVSSHINGEFHL+L CG+SLKMSRSYK+KVKHFF
Sbjct:    3 QNESKKLKVIIVDDEELARQGLEMRLQNFDEVEVVANCANAKEALRAIVEHEPDLVFLDIQMPGKTGFEMIQEIQVDILPMIIFVTAYDSFAVDAFEIHAVDYLLKPVETERLIDAISKAVERKSQLSVMDEKDRLLNLVVSITGKSPLAIDELLDNQEESTEHADRLAIKDGSSITFVPIKDIDWIDAAGDYMCVHVAGVVHIMRTTMKELETKLDPSIFQRVHRSTIVNLQRVEKVSSHINGEFHLSLSCGSSLKMSRSYKEKVKHFF 272          
BLAST of mRNA_D-mesarthrocarpus_Contig9768.1.1 vs. uniprot
Match: A0A349E620_9GAMM (DNA-binding response regulator n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A349E620_9GAMM)

HSP 1 Score: 384 bits (986), Expect = 2.360e-132
Identity = 189/268 (70.52%), Postives = 225/268 (83.96%), Query Frame = 1
Query:    7 DPNVLTAIIVDDEDLARQGLAMRLKELAGVELLAECGNAREAISAISEHEPDVVFLDIQMPGKSGLEMISEIQGDIMPMVIFVTAYDDYAVEAFKVHAVDYLLKPVESDRLKEAVDIARGLKARDSLHDEKEKLMGMVVSLTGKSPAAIGQMMTEGEDLVEQPDRLAIKDGSSITFVPVRDIDWIDAAGDYMCVHVQGQTHIMRTTMKELESKLDPTLFQRVHRSTIVNLERVEKVSSHINGEFHLTLKCGTSLKMSRSYKDKVKHFF 810
            D  VL AIIVDDE+LARQGL MRL  +   +++  C NA+EA+ AI+E EPD+VFLDIQMPGK+GLEMI EIQ DI+PM++FVTAYD +AV+AFK+HA+DYLLKPVE++RL EAV  A   K +    +EK++L+ ++VSLTGKS AAI +++   +  VE  DRLAIKDGSSITFVP++DIDW+DAAGDYMCVHV G THIMRTTMKELESKLDP +FQRVHRSTIVNL RVEKVSSHINGEFHLTL CG+SLKMSRSYK+KVKHFF
Sbjct:    5 DAKVLKAIIVDDEELARQGLEMRLSAIENAQIVKSCANAKEALHAIAELEPDLVFLDIQMPGKTGLEMIGEIQTDILPMIVFVTAYDSFAVDAFKIHAIDYLLKPVENERLLEAVAKASQHKLQVDAAEEKQRLLNLLVSLTGKSSAAISELLETKDQSVEHADRLAIKDGSSITFVPIKDIDWVDAAGDYMCVHVAGATHIMRTTMKELESKLDPAIFQRVHRSTIVNLRRVEKVSSHINGEFHLTLSCGSSLKMSRSYKEKVKHFF 272          
BLAST of mRNA_D-mesarthrocarpus_Contig9768.1.1 vs. uniprot
Match: A0A2E1ZKE1_9GAMM (DNA-binding response regulator n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2E1ZKE1_9GAMM)

HSP 1 Score: 382 bits (980), Expect = 1.930e-131
Identity = 188/270 (69.63%), Postives = 227/270 (84.07%), Query Frame = 1
Query:    1 QRDPNVLTAIIVDDEDLARQGLAMRLKELAGVELLAECGNAREAISAISEHEPDVVFLDIQMPGKSGLEMISEIQGDIMPMVIFVTAYDDYAVEAFKVHAVDYLLKPVESDRLKEAVDIARGLKARDSLHDEKEKLMGMVVSLTGKSPAAIGQMMTEGEDLVEQPDRLAIKDGSSITFVPVRDIDWIDAAGDYMCVHVQGQTHIMRTTMKELESKLDPTLFQRVHRSTIVNLERVEKVSSHINGEFHLTLKCGTSLKMSRSYKDKVKHFF 810
            Q +   L AIIVDDE+LARQGL+MR+++   +E++AEC N +EAI+AI EHEPDVVFLDIQMPG +G E+I+E+QGD+MPM+IFVTAYD +AV AFKVHA+DYLLKPVE + L  A+D A+  K +     EK+KL+ + V LTGKS +AIG+++   ED+VE+ DRLAIKDGSSITFVPV+DIDWIDAAGDYMCVHV+ + HIMRTTMKELE+KLDP +FQRVHRSTIVN E VEKVSSHINGEFHLTL CG+S+KMSRSYK KVKHFF
Sbjct:    3 QSESKKLKAIIVDDEELARQGLSMRIEQYEDLEIVAECRNGKEAIAAIIEHEPDVVFLDIQMPGMTGFEVINEVQGDVMPMIIFVTAYDAFAVAAFKVHAIDYLLKPVEVEGLARAIDRAKQQKEQKVAIPEKQKLLELAVXLTGKSASAIGELIYSEEDIVERADRLAIKDGSSITFVPVKDIDWIDAAGDYMCVHVKNEXHIMRTTMKELEAKLDPLIFQRVHRSTIVNTEXVEKVSSHINGEFHLTLSCGSSIKMSRSYKGKVKHFF 272          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9768.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E9JF65_9GAMM1.430e-14074.44DNA-binding response regulator n=1 Tax=Gammaproteo... [more]
A0A3B9X4B8_9GAMM1.190e-13773.48DNA-binding response regulator n=1 Tax=Gammaproteo... [more]
A0A354TTQ3_9GAMM7.460e-13672.59DNA-binding response regulator n=10 Tax=unclassifi... [more]
A0A2D8N4U5_9GAMM4.620e-13572.35DNA-binding response regulator n=2 Tax=root TaxID=... [more]
A0A2E9ZM13_9GAMM2.480e-13472.66DNA-binding response regulator n=1 Tax=Gammaproteo... [more]
A0A3C0EXM8_9GAMM2.660e-13470.83DNA-binding response regulator n=3 Tax=Gammaproteo... [more]
A0A2A4XFL5_9GAMM3.520e-13470.90DNA-binding response regulator n=1 Tax=SAR86 clust... [more]
A0A2A5B9I5_9GAMM8.250e-13370.00DNA-binding response regulator n=1 Tax=SAR86 clust... [more]
A0A349E620_9GAMM2.360e-13270.52DNA-binding response regulator n=1 Tax=Gammaproteo... [more]
A0A2E1ZKE1_9GAMM1.930e-13169.63DNA-binding response regulator n=2 Tax=Gammaproteo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9768contigD-mesarthrocarpus_Contig9768:627..1439 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1117647.M5M_13035
PFAMsLytTR,Response_reg
Model size813
Max annot lvl1236|Gammaproteobacteria
KEGG koko:K02477
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.94e-106
EggNOG OGsCOG3279@1|root,COG3279@2|Bacteria,1MUE8@1224|Proteobacteria,1RMJJ@1236|Gammaproteobacteria,1J5Q3@118884|unclassified Gammaproteobacteria
DescriptionResponse regulator of the LytR AlgR family
Cds size813
COG categoryK
BRITEko00000,ko02022
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791128.2793214-CDS-D-mesarthrocarpus_Contig9768:626..14391680791128.2793214-CDS-D-mesarthrocarpus_Contig9768:626..1439Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9768 627..1439 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9768.1.1prot_D-mesarthrocarpus_Contig9768.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9768 627..1439 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9768.1.1

>prot_D-mesarthrocarpus_Contig9768.1.1 ID=prot_D-mesarthrocarpus_Contig9768.1.1|Name=mRNA_D-mesarthrocarpus_Contig9768.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=271bp
QRDPNVLTAIIVDDEDLARQGLAMRLKELAGVELLAECGNAREAISAISE
HEPDVVFLDIQMPGKSGLEMISEIQGDIMPMVIFVTAYDDYAVEAFKVHA
VDYLLKPVESDRLKEAVDIARGLKARDSLHDEKEKLMGMVVSLTGKSPAA
IGQMMTEGEDLVEQPDRLAIKDGSSITFVPVRDIDWIDAAGDYMCVHVQG
QTHIMRTTMKELESKLDPTLFQRVHRSTIVNLERVEKVSSHINGEFHLTL
KCGTSLKMSRSYKDKVKHFF*
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mRNA from alignment at D-mesarthrocarpus_Contig9768:627..1439-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9768.1.1 ID=mRNA_D-mesarthrocarpus_Contig9768.1.1|Name=mRNA_D-mesarthrocarpus_Contig9768.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=813bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9768:627..1439- (Discosporangium mesarthrocarpum MT17_79)
CAGCGCGACCCGAACGTGCTGACCGCGATTATCGTTGACGATGAAGACCT CGCCCGGCAAGGGCTGGCCATGCGCCTCAAGGAGCTGGCGGGGGTTGAGC TGTTGGCCGAGTGCGGCAATGCCCGTGAGGCGATCAGTGCCATCAGCGAG CATGAGCCTGACGTGGTGTTCCTCGATATCCAGATGCCCGGCAAAAGCGG CCTGGAGATGATCAGCGAAATACAGGGTGACATCATGCCCATGGTCATTT TTGTCACCGCCTATGACGATTACGCCGTGGAGGCCTTCAAGGTCCACGCG GTTGACTACCTGCTCAAGCCGGTGGAAAGCGACCGGCTGAAAGAGGCTGT TGATATTGCCCGGGGCCTGAAGGCCCGAGATTCCCTGCACGACGAGAAAG AAAAGCTGATGGGCATGGTTGTGTCCCTTACTGGTAAATCCCCGGCGGCC ATCGGCCAGATGATGACCGAGGGGGAGGACCTGGTGGAGCAACCGGACCG GCTGGCCATCAAGGATGGGTCTTCAATTACCTTTGTACCGGTGCGCGATA TCGACTGGATTGATGCCGCCGGCGACTACATGTGTGTGCACGTGCAGGGG CAAACACACATCATGCGTACCACCATGAAGGAGCTGGAGTCGAAATTGGA CCCAACCCTGTTTCAACGCGTGCACCGCAGCACCATTGTCAATCTGGAGC GGGTTGAAAAAGTCTCCTCACACATCAACGGCGAGTTCCACCTGACCCTC AAGTGCGGCACTTCCCTGAAAATGAGCCGCTCCTACAAAGACAAGGTCAA ACACTTTTTCTAA
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9768:627..1439-

>mRNA_D-mesarthrocarpus_Contig9768.1.1 ID=mRNA_D-mesarthrocarpus_Contig9768.1.1|Name=mRNA_D-mesarthrocarpus_Contig9768.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=813bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9768:627..1439- (Discosporangium mesarthrocarpum MT17_79)
CAGCGCGACCCGAACGTGCTGACCGCGATTATCGTTGACGATGAAGACCT
CGCCCGGCAAGGGCTGGCCATGCGCCTCAAGGAGCTGGCGGGGGTTGAGC
TGTTGGCCGAGTGCGGCAATGCCCGTGAGGCGATCAGTGCCATCAGCGAG
CATGAGCCTGACGTGGTGTTCCTCGATATCCAGATGCCCGGCAAAAGCGG
CCTGGAGATGATCAGCGAAATACAGGGTGACATCATGCCCATGGTCATTT
TTGTCACCGCCTATGACGATTACGCCGTGGAGGCCTTCAAGGTCCACGCG
GTTGACTACCTGCTCAAGCCGGTGGAAAGCGACCGGCTGAAAGAGGCTGT
TGATATTGCCCGGGGCCTGAAGGCCCGAGATTCCCTGCACGACGAGAAAG
AAAAGCTGATGGGCATGGTTGTGTCCCTTACTGGTAAATCCCCGGCGGCC
ATCGGCCAGATGATGACCGAGGGGGAGGACCTGGTGGAGCAACCGGACCG
GCTGGCCATCAAGGATGGGTCTTCAATTACCTTTGTACCGGTGCGCGATA
TCGACTGGATTGATGCCGCCGGCGACTACATGTGTGTGCACGTGCAGGGG
CAAACACACATCATGCGTACCACCATGAAGGAGCTGGAGTCGAAATTGGA
CCCAACCCTGTTTCAACGCGTGCACCGCAGCACCATTGTCAATCTGGAGC
GGGTTGAAAAAGTCTCCTCACACATCAACGGCGAGTTCCACCTGACCCTC
AAGTGCGGCACTTCCCTGAAAATGAGCCGCTCCTACAAAGACAAGGTCAA
ACACTTTTTCTAA
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