mRNA_D-mesarthrocarpus_Contig9757.2.3 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9757.2.3
Unique NamemRNA_D-mesarthrocarpus_Contig9757.2.3
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9757.2.3 vs. uniprot
Match: A0A835Z2W5_9STRA (Asparagine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2W5_9STRA)

HSP 1 Score: 172 bits (437), Expect = 3.380e-47
Identity = 81/103 (78.64%), Postives = 87/103 (84.47%), Query Frame = 1
Query:   10 QVFNLHQFDCARANKSTSAWGVEARVPFLDTDFLDEAMGIDPHDKLIKKEEGRMEKYIIRKAFDTPDDPYLPDHILYRQKEQFSDGVGYSWIDTLRDQANKEV 318
            +V  LHQFDC RANKSTSAWGVE RVPFLD DFL+ +M IDP +K+I K EGRMEKYIIRKAFDTPDDPYLPDHIL+RQKEQFSDGVGY WID LRD A   V
Sbjct:  373 KVQALHQFDCLRANKSTSAWGVEPRVPFLDADFLELSMNIDPSEKMIHKAEGRMEKYIIRKAFDTPDDPYLPDHILWRQKEQFSDGVGYGWIDALRDNAAAHV 475          
BLAST of mRNA_D-mesarthrocarpus_Contig9757.2.3 vs. uniprot
Match: A0A2Z6M0K2_TRISU (Asparagine synthetase domain-containing protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6M0K2_TRISU)

HSP 1 Score: 160 bits (405), Expect = 1.060e-45
Identity = 75/118 (63.56%), Postives = 91/118 (77.12%), Query Frame = 1
Query:   22 LHQFDCARANKSTSAWGVEARVPFLDTDFLDEAMGIDPHDKLIKKEEGRMEKYIIRKAFDTPDDPYLPDHILYRQKEQFSDGVGYSWIDTLRDQANKEVWRSSARLRTGPWSPVLPSL 375
            LHQ+DC RANKST AWG+EARVPFLD +F++ AM I+P +K+IKK+EGR+EKYI+RKAFD  ++PYLP HILYRQKEQFSDGVGYSWID L+  A K  W   A    G    +L S+
Sbjct:    5 LHQYDCQRANKSTFAWGLEARVPFLDKEFINVAMNINPENKMIKKDEGRIEKYILRKAFDDEENPYLPKHILYRQKEQFSDGVGYSWIDGLKAHAAKHRWNLRASTHEGEALALLNSM 122          
BLAST of mRNA_D-mesarthrocarpus_Contig9757.2.3 vs. uniprot
Match: A0A7J7QQH9_9CHLO (Asparagine synthetase [glutamine-hydrolyzing] n=4 Tax=Scenedesmaceae TaxID=3086 RepID=A0A7J7QQH9_9CHLO)

HSP 1 Score: 167 bits (424), Expect = 2.660e-45
Identity = 78/103 (75.73%), Postives = 87/103 (84.47%), Query Frame = 1
Query:   10 QVFNLHQFDCARANKSTSAWGVEARVPFLDTDFLDEAMGIDPHDKLIKKEEGRMEKYIIRKAFDTPDDPYLPDHILYRQKEQFSDGVGYSWIDTLRDQANKEV 318
            +V  LHQFDC RANKST AWGVEARVPFLD  FL+ AM IDP +K+I K EGRMEKYI+RKAFDTPDDPYLP H+L+RQKEQFSDGVGYSWID L+D A+  V
Sbjct:  379 KVQALHQFDCLRANKSTMAWGVEARVPFLDKQFLNVAMAIDPAEKMINKAEGRMEKYILRKAFDTPDDPYLPGHVLWRQKEQFSDGVGYSWIDGLKDHADNVV 481          
BLAST of mRNA_D-mesarthrocarpus_Contig9757.2.3 vs. uniprot
Match: A0A7C9CPC0_OPUST (Asparagine synthetase domain-containing protein (Fragment) n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9CPC0_OPUST)

HSP 1 Score: 155 bits (392), Expect = 2.810e-45
Identity = 71/99 (71.72%), Postives = 83/99 (83.84%), Query Frame = 1
Query:   22 LHQFDCARANKSTSAWGVEARVPFLDTDFLDEAMGIDPHDKLIKKEEGRMEKYIIRKAFDTPDDPYLPDHILYRQKEQFSDGVGYSWIDTLRDQANKEV 318
            LH +DC RANK+TSAWGVEARVPFLD +F++ AM IDP  K+IK++EGR+EK+I+R AFD    PYLP HILYRQKEQFSDGVGYSWID L+D ANK V
Sbjct:    6 LHLYDCLRANKATSAWGVEARVPFLDKEFINVAMSIDPEWKMIKRDEGRIEKWILRNAFDDEKKPYLPKHILYRQKEQFSDGVGYSWIDGLKDHANKHV 104          
BLAST of mRNA_D-mesarthrocarpus_Contig9757.2.3 vs. uniprot
Match: A0A4D9DB06_9SAUR (Adenine phosphoribosyltransferase n=1 Tax=Platysternon megacephalum TaxID=55544 RepID=A0A4D9DB06_9SAUR)

HSP 1 Score: 159 bits (401), Expect = 1.300e-44
Identity = 73/105 (69.52%), Postives = 86/105 (81.90%), Query Frame = 1
Query:    4 CSQVFNLHQFDCARANKSTSAWGVEARVPFLDTDFLDEAMGIDPHDKLIKKEEGRMEKYIIRKAFDTPDDPYLPDHILYRQKEQFSDGVGYSWIDTLRDQANKEV 318
            C ++  LHQ+DC RANKSTSAWG+EARVPFLD +F++ AM IDP  K+IK EEGRMEK+I+RKAFD  + PYLP HILYRQKEQFSDGVGYSWID L+  A + V
Sbjct:   46 CRKIKALHQYDCLRANKSTSAWGLEARVPFLDKEFINVAMNIDPEWKMIKPEEGRMEKWILRKAFDDEEHPYLPKHILYRQKEQFSDGVGYSWIDGLKAHAEEHV 150          
BLAST of mRNA_D-mesarthrocarpus_Contig9757.2.3 vs. uniprot
Match: A0A3N6QQ25_BRACR (Asparagine synthetase domain-containing protein (Fragment) n=1 Tax=Brassica cretica TaxID=69181 RepID=A0A3N6QQ25_BRACR)

HSP 1 Score: 158 bits (400), Expect = 6.100e-44
Identity = 72/105 (68.57%), Postives = 86/105 (81.90%), Query Frame = 1
Query:    4 CSQVFNLHQFDCARANKSTSAWGVEARVPFLDTDFLDEAMGIDPHDKLIKKEEGRMEKYIIRKAFDTPDDPYLPDHILYRQKEQFSDGVGYSWIDTLRDQANKEV 318
            C ++  LHQ+DC RANKSTSAWGVEARVPFLD +FL+ AM IDP  K+I+ + GR+EK+++R AFD  + PYLP HILYRQKEQFSDGVGYSWID L+D ANK V
Sbjct:  115 CRKIKALHQYDCLRANKSTSAWGVEARVPFLDKEFLNVAMSIDPEWKMIRPDLGRIEKWVLRNAFDDEEKPYLPKHILYRQKEQFSDGVGYSWIDGLKDHANKHV 219          
BLAST of mRNA_D-mesarthrocarpus_Contig9757.2.3 vs. uniprot
Match: A0A6H5J7T0_9PHAE (Glutamine amidotransferase type-2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7T0_9PHAE)

HSP 1 Score: 159 bits (402), Expect = 7.890e-44
Identity = 74/103 (71.84%), Postives = 88/103 (85.44%), Query Frame = 1
Query:   10 QVFNLHQFDCARANKSTSAWGVEARVPFLDTDFLDEAMGIDPHDKLIKKEEGRMEKYIIRKAFDTPDDPYLPDHILYRQKEQFSDGVGYSWIDTLRDQANKEV 318
            +V  LHQFDCARANKST++WGVEARVPFLD DF+DEAM  +P DK++    G++EKYI+RKAFDTP+D YLP HILYRQKEQFSDGVGY+WID LR +A +EV
Sbjct:  250 KVLALHQFDCARANKSTASWGVEARVPFLDVDFIDEAMMTNPEDKMVAP--GKIEKYIMRKAFDTPEDIYLPQHILYRQKEQFSDGVGYNWIDELRAKAAEEV 350          
BLAST of mRNA_D-mesarthrocarpus_Contig9757.2.3 vs. uniprot
Match: A0A067CH81_SAPPC (Asparagine synthase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CH81_SAPPC)

HSP 1 Score: 163 bits (413), Expect = 9.490e-44
Identity = 74/100 (74.00%), Postives = 86/100 (86.00%), Query Frame = 1
Query:   19 NLHQFDCARANKSTSAWGVEARVPFLDTDFLDEAMGIDPHDKLIKKEEGRMEKYIIRKAFDTPDDPYLPDHILYRQKEQFSDGVGYSWIDTLRDQANKEV 318
            +LHQ+DC RANK+TSAWG+EARVPFLD DFLD AM ID  +K+  K  GRMEK+IIRKAFDTPD+PYLP HIL+RQKEQFSDGVGY WID+L+D A +EV
Sbjct:  380 SLHQYDCLRANKATSAWGLEARVPFLDADFLDVAMNIDTQEKMCDKASGRMEKHIIRKAFDTPDEPYLPAHILWRQKEQFSDGVGYGWIDSLKDWAEREV 479          
BLAST of mRNA_D-mesarthrocarpus_Contig9757.2.3 vs. uniprot
Match: A0A7J8PZ29_GOSRA (Asparagine synthetase domain-containing protein n=2 Tax=Gossypium raimondii TaxID=29730 RepID=A0A7J8PZ29_GOSRA)

HSP 1 Score: 158 bits (400), Expect = 1.070e-43
Identity = 71/105 (67.62%), Postives = 87/105 (82.86%), Query Frame = 1
Query:    4 CSQVFNLHQFDCARANKSTSAWGVEARVPFLDTDFLDEAMGIDPHDKLIKKEEGRMEKYIIRKAFDTPDDPYLPDHILYRQKEQFSDGVGYSWIDTLRDQANKEV 318
            C ++  LHQ+DC RANK+TSAWG+EARVPFLD +F++ AM IDP  K+IKK++GR+EK+I+RKAFD  + PYLP HILYRQKEQFSDGVGYSWID L+  A K V
Sbjct:  119 CHKIKALHQYDCLRANKATSAWGLEARVPFLDIEFINAAMSIDPESKMIKKDQGRIEKWILRKAFDDEERPYLPKHILYRQKEQFSDGVGYSWIDGLKAHAAKNV 223          
BLAST of mRNA_D-mesarthrocarpus_Contig9757.2.3 vs. uniprot
Match: A0A3M7M417_9PLEO (Asparagine synthetase n=1 Tax=Pyrenophora seminiperda CCB06 TaxID=1302712 RepID=A0A3M7M417_9PLEO)

HSP 1 Score: 158 bits (400), Expect = 1.640e-43
Identity = 79/124 (63.71%), Postives = 89/124 (71.77%), Query Frame = 1
Query:   10 QVFNLHQFDCARANKSTSAWGVEARVPFLDTDFLDEAMGIDPHDKLIKKEEGRMEKYIIRKAFDTPDDP----YLPDHILYRQKEQFSDGVGYSWIDTLRDQANKEVWRSSARLRTGPWSPVLP 369
            +V NLH  DC RANKSTSAWGVEARVPFLD +FL+ AM IDP DKLI +E GRMEKYI+RKAFDT D+P    YLPD IL+RQKEQFSDGVGY WID L+D A   V     +     W   +P
Sbjct:  177 RVKNLHLADCLRANKSTSAWGVEARVPFLDKEFLNTAMNIDPADKLIDRENGRMEKYILRKAFDTSDEPDTQPYLPDKILWRQKEQFSDGVGYGWIDALKDTAELHVTDEMMKKPKPEWGSDIP 300          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9757.2.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z2W5_9STRA3.380e-4778.64Asparagine synthase n=1 Tax=Tribonema minus TaxID=... [more]
A0A2Z6M0K2_TRISU1.060e-4563.56Asparagine synthetase domain-containing protein n=... [more]
A0A7J7QQH9_9CHLO2.660e-4575.73Asparagine synthetase [glutamine-hydrolyzing] n=4 ... [more]
A0A7C9CPC0_OPUST2.810e-4571.72Asparagine synthetase domain-containing protein (F... [more]
A0A4D9DB06_9SAUR1.300e-4469.52Adenine phosphoribosyltransferase n=1 Tax=Platyste... [more]
A0A3N6QQ25_BRACR6.100e-4468.57Asparagine synthetase domain-containing protein (F... [more]
A0A6H5J7T0_9PHAE7.890e-4471.84Glutamine amidotransferase type-2 domain-containin... [more]
A0A067CH81_SAPPC9.490e-4474.00Asparagine synthase n=3 Tax=Saprolegniaceae TaxID=... [more]
A0A7J8PZ29_GOSRA1.070e-4367.62Asparagine synthetase domain-containing protein n=... [more]
A0A3M7M417_9PLEO1.640e-4363.71Asparagine synthetase n=1 Tax=Pyrenophora seminipe... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9757contigD-mesarthrocarpus_Contig9757:3662..4604 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog112098.XP_008612664.1
Preferred nameASN1
PFAMsAsn_synthase,GATase_7
Model size663
Max annot lvl2759|Eukaryota
KEGG rclassRC00010
KEGG koko:K01265,ko:K01953
KEGG ReactionR00578
KEGG Pathwayko00250,ko01100,ko01110,map00250,map01100,map01110
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004066,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005911,GO:0006082,GO:0006520,GO:0006528,GO:0006529,GO:0006807,GO:0006950,GO:0006970,GO:0006972,GO:0007154,GO:0008150,GO:0008152,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009066,GO:0009067,GO:0009267,GO:0009314,GO:0009416,GO:0009506,GO:0009605,GO:0009628,GO:0009642,GO:0009646,GO:0009651,GO:0009743,GO:0009744,GO:0009746,GO:0009749,GO:0009750,GO:0009987,GO:0009991,GO:0010033,GO:0016053,GO:0016054,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0030054,GO:0031667,GO:0031668,GO:0031669,GO:0032787,GO:0033554,GO:0034284,GO:0034285,GO:0034641,GO:0042221,GO:0042538,GO:0042594,GO:0042802,GO:0042803,GO:0043436,GO:0043603,GO:0043604,GO:0043617,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046395,GO:0046983,GO:0050896,GO:0051716,GO:0055044,GO:0071496,GO:0071704,GO:0072330,GO:0097164,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901607,GO:1901700
Exons2
Evalue4.2e-44
EggNOG OGsCOG0367@1|root,KOG0571@2759|Eukaryota
EC3.4.11.18,6.3.5.4
DescriptionL-asparagine biosynthetic process
Cds size663
COG categoryE
BRITEko00000,ko00001,ko01000,ko01002
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791127.4049866-CDS-D-mesarthrocarpus_Contig9757:3661..41681680791127.4049866-CDS-D-mesarthrocarpus_Contig9757:3661..4168Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9757 3662..4168 -
1680791127.4240623-CDS-D-mesarthrocarpus_Contig9757:4448..46041680791127.4240623-CDS-D-mesarthrocarpus_Contig9757:4448..4604Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9757 4449..4604 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9757.2.3prot_D-mesarthrocarpus_Contig9757.2.3Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9757 3662..4604 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9757.2.3

>prot_D-mesarthrocarpus_Contig9757.2.3 ID=prot_D-mesarthrocarpus_Contig9757.2.3|Name=mRNA_D-mesarthrocarpus_Contig9757.2.3|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=221bp
MCSQVFNLHQFDCARANKSTSAWGVEARVPFLDTDFLDEAMGIDPHDKLI
KKEEGRMEKYIIRKAFDTPDDPYLPDHILYRQKEQFSDGVGYSWIDTLRD
QANKEVWRSSARLRTGPWSPVLPSLFFPSFHILKTTHTQTVLGLGFFLGS
ILLLPLSVRCTYMHMCLCIHVHQLLYGFQHGVLPLWPMDSLYPPQNLVKS
DCLRSAENRTGRSRSQASTL*
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mRNA from alignment at D-mesarthrocarpus_Contig9757:3662..4604-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9757.2.3 ID=mRNA_D-mesarthrocarpus_Contig9757.2.3|Name=mRNA_D-mesarthrocarpus_Contig9757.2.3|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=943bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9757:3662..4604- (Discosporangium mesarthrocarpum MT17_79)
ATGTGCTCTCAGGTCTTTAACCTGCACCAATTTGACTGTGCTCGTGCCAA CAAGAGCACCAGCGCATGGGGTGTGGAGGCCCGCGTGCCCTTCCTGGACA CCGACTTCCTTGACGAGGCCATGGGCATCGACCCGCATGACAAGCTCATC AAGAAGGTACGGGAGGCAGGCGTTGTCTGTCATGCACTCATCAGTGTATG TATCCCCAGAGTGATTTTTACCGAAAAATGTTTTTTTTTTTTCGGGGAGG AAGTGGACGACATCCCCAGCCATCATGCGCCTGGGTTTCCACAACTGATC CCTTGGATGTTCGTGCTCAAAGTGTTAGGGGGCATGTAGGGGTCCTCTTG TCTCCATAGACGGTCCTACTTCAAATCCTTCCCACCCCTGGTTCGCCCAA CGCCTTTCGTATTACTGCCAACGTGCGGTTCCACAGGAGGAGGGGCGCAT GGAAAAGTACATCATCAGGAAGGCGTTTGACACCCCAGATGACCCCTACT TGCCGGACCACATCCTCTACCGGCAGAAGGAGCAGTTCAGCGACGGTGTA GGCTACAGCTGGATAGACACCCTGAGAGACCAGGCCAACAAAGAGGTCTG GCGTAGTTCCGCAAGGCTTAGGACTGGACCGTGGAGTCCTGTACTTCCAT CTCTCTTTTTTCCCTCCTTCCATATTCTTAAAACCACGCACACGCAAACC GTGTTAGGGCTGGGGTTCTTCCTTGGTAGCATTCTCCTCCTCCCCTTGTC AGTCCGTTGCACTTACATGCATATGTGCTTATGTATCCATGTTCACCAGC TCCTGTATGGGTTCCAACATGGTGTGCTGCCCTTGTGGCCCATGGACAGT TTGTACCCACCCCAAAACCTGGTAAAAAGTGATTGTCTCAGATCCGCGGA AAACAGAACAGGTAGATCAAGATCACAGGCCTCAACCCTTTGA
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9757:3662..4604-

>mRNA_D-mesarthrocarpus_Contig9757.2.3 ID=mRNA_D-mesarthrocarpus_Contig9757.2.3|Name=mRNA_D-mesarthrocarpus_Contig9757.2.3|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=663bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9757:3662..4604- (Discosporangium mesarthrocarpum MT17_79)
ATGTGCTCTCAGGTCTTTAACCTGCACCAATTTGACTGTGCTCGTGCCAA
CAAGAGCACCAGCGCATGGGGTGTGGAGGCCCGCGTGCCCTTCCTGGACA
CCGACTTCCTTGACGAGGCCATGGGCATCGACCCGCATGACAAGCTCATC
AAGAAGGAGGAGGGGCGCATGGAAAAGTACATCATCAGGAAGGCGTTTGA
CACCCCAGATGACCCCTACTTGCCGGACCACATCCTCTACCGGCAGAAGG
AGCAGTTCAGCGACGGTGTAGGCTACAGCTGGATAGACACCCTGAGAGAC
CAGGCCAACAAAGAGGTCTGGCGTAGTTCCGCAAGGCTTAGGACTGGACC
GTGGAGTCCTGTACTTCCATCTCTCTTTTTTCCCTCCTTCCATATTCTTA
AAACCACGCACACGCAAACCGTGTTAGGGCTGGGGTTCTTCCTTGGTAGC
ATTCTCCTCCTCCCCTTGTCAGTCCGTTGCACTTACATGCATATGTGCTT
ATGTATCCATGTTCACCAGCTCCTGTATGGGTTCCAACATGGTGTGCTGC
CCTTGTGGCCCATGGACAGTTTGTACCCACCCCAAAACCTGGTAAAAAGT
GATTGTCTCAGATCCGCGGAAAACAGAACAGGTAGATCAAGATCACAGGC
CTCAACCCTTTGA
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