mRNA_D-mesarthrocarpus_Contig9750.3.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9750.3.1 vs. uniprot
Match: D7G160_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G160_ECTSI) HSP 1 Score: 93.6 bits (231), Expect = 1.420e-20 Identity = 50/77 (64.94%), Postives = 58/77 (75.32%), Query Frame = 1 Query: 1 VRAVSRARVPVVKMVSSLR--GPDSMPLKCDISINNLVAVHNTRLLRLYTLLDVRVRQLLYLVKAWSKARAVNDSSK 225 V AV R+RVPVVK R GP P++CDIS+NNLVAVHNTRL++ YT LD R +LLYLVKAW+KAR V DSSK Sbjct: 555 VMAVHRSRVPVVKTCVPRRLWGPAGRPIECDISVNNLVAVHNTRLVKAYTDLDPRCHRLLYLVKAWAKARGVGDSSK 631
BLAST of mRNA_D-mesarthrocarpus_Contig9750.3.1 vs. uniprot
Match: A0A6H5K7K2_9PHAE (NTP_transf_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7K2_9PHAE) HSP 1 Score: 93.6 bits (231), Expect = 1.420e-20 Identity = 50/77 (64.94%), Postives = 58/77 (75.32%), Query Frame = 1 Query: 1 VRAVSRARVPVVKMVSSLR--GPDSMPLKCDISINNLVAVHNTRLLRLYTLLDVRVRQLLYLVKAWSKARAVNDSSK 225 V AV R+RVPVVK R GP P++CDIS+NNLVAVHNTRL++ YT LD R +LLYLVKAW+KAR V DSSK Sbjct: 563 VMAVHRSRVPVVKTCVPRRLWGPAGRPIECDISVNNLVAVHNTRLVKAYTDLDPRCHRLLYLVKAWAKARGVGDSSK 639
BLAST of mRNA_D-mesarthrocarpus_Contig9750.3.1 vs. uniprot
Match: A0A843U1A5_COLES (Uncharacterized protein (Fragment) n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843U1A5_COLES) HSP 1 Score: 79.0 bits (193), Expect = 1.660e-15 Identity = 40/73 (54.79%), Postives = 55/73 (75.34%), Query Frame = 1 Query: 1 VRAVSRARVPVVKMVSSLRGPDSMPLKCDISINNLVAVHNTRLLRLYTLLDVRVRQLLYLVKAWSKARAVNDS 219 V+A++RARVP+VK++ L G L CDI INN++AV NT+LLR Y +DVR+RQL ++VK W+K R VND+ Sbjct: 123 VQALTRARVPIVKLMDPLTG-----LSCDICINNILAVVNTKLLRDYAKIDVRLRQLAFIVKHWAKKRGVNDT 190
BLAST of mRNA_D-mesarthrocarpus_Contig9750.3.1 vs. uniprot
Match: UPI001BF3888A (Uncharacterized protein n=1 Tax=Carya illinoinensis TaxID=32201 RepID=UPI001BF3888A) HSP 1 Score: 77.8 bits (190), Expect = 4.960e-15 Identity = 38/73 (52.05%), Postives = 56/73 (76.71%), Query Frame = 1 Query: 1 VRAVSRARVPVVKMVSSLRGPDSMPLKCDISINNLVAVHNTRLLRLYTLLDVRVRQLLYLVKAWSKARAVNDS 219 V+A++RARVP+VK++ + G L CDI INN++AV NT+LLR Y L+D R+RQL ++VK W+K+R VN++ Sbjct: 531 VQALTRARVPIVKLMDPVTG-----LSCDICINNILAVVNTKLLRDYALIDARLRQLAFIVKHWAKSRGVNET 598
BLAST of mRNA_D-mesarthrocarpus_Contig9750.3.1 vs. uniprot
Match: A0A7J8NKX0_9ROSI (TUTase domain-containing protein (Fragment) n=1 Tax=Gossypium lobatum TaxID=34289 RepID=A0A7J8NKX0_9ROSI) HSP 1 Score: 76.3 bits (186), Expect = 6.630e-15 Identity = 38/71 (53.52%), Postives = 54/71 (76.06%), Query Frame = 1 Query: 1 VRAVSRARVPVVKMVSSLRGPDSMPLKCDISINNLVAVHNTRLLRLYTLLDVRVRQLLYLVKAWSKARAVN 213 V+A++RARVP+VK++ L G + CDI +NN++AV NTRLLR Y +DVR+RQL ++VK W+K+R VN Sbjct: 205 VQALTRARVPIVKLMDPLTG-----ISCDICVNNVLAVVNTRLLRDYAKIDVRLRQLAFIVKHWAKSRGVN 270
BLAST of mRNA_D-mesarthrocarpus_Contig9750.3.1 vs. uniprot
Match: UPI0006AB3F4E (UTP:RNA uridylyltransferase 1-like n=1 Tax=Brassica napus TaxID=3708 RepID=UPI0006AB3F4E) HSP 1 Score: 77.0 bits (188), Expect = 8.190e-15 Identity = 36/73 (49.32%), Postives = 58/73 (79.45%), Query Frame = 1 Query: 1 VRAVSRARVPVVKMVSSLRGPDSMPLKCDISINNLVAVHNTRLLRLYTLLDVRVRQLLYLVKAWSKARAVNDS 219 V+A++RARVP+VK++ + G + CDI INN++AV NT+LLR Y+++D+R+RQL ++VK W+K+R VN++ Sbjct: 178 VQALTRARVPIVKLMDPVTG-----ISCDICINNVLAVVNTKLLRDYSMIDIRLRQLAFIVKHWAKSRKVNET 245
BLAST of mRNA_D-mesarthrocarpus_Contig9750.3.1 vs. uniprot
Match: A0A5B7B3X9_DAVIN (Uncharacterized protein (Fragment) n=3 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B7B3X9_DAVIN) HSP 1 Score: 77.0 bits (188), Expect = 9.090e-15 Identity = 38/73 (52.05%), Postives = 56/73 (76.71%), Query Frame = 1 Query: 1 VRAVSRARVPVVKMVSSLRGPDSMPLKCDISINNLVAVHNTRLLRLYTLLDVRVRQLLYLVKAWSKARAVNDS 219 V+A++RARVP+VK++ + G + CDI INNL+AV NT+LLR Y +DVR+RQL ++VK W+K+R VN++ Sbjct: 285 VQALTRARVPIVKLMDPVTG-----ISCDICINNLLAVVNTKLLRDYAQIDVRLRQLAFIVKHWAKSRGVNET 352
BLAST of mRNA_D-mesarthrocarpus_Contig9750.3.1 vs. uniprot
Match: UPI001CB93AC5 (UTP:RNA uridylyltransferase 1 n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB93AC5) HSP 1 Score: 77.0 bits (188), Expect = 9.250e-15 Identity = 37/73 (50.68%), Postives = 57/73 (78.08%), Query Frame = 1 Query: 1 VRAVSRARVPVVKMVSSLRGPDSMPLKCDISINNLVAVHNTRLLRLYTLLDVRVRQLLYLVKAWSKARAVNDS 219 V+A++RARVP+VK++ + G + CDI +NNL+AV NT+LLR Y+ +DVR+RQL ++VK W+K+R VN++ Sbjct: 423 VQALTRARVPIVKLMDPVTG-----ISCDICVNNLLAVINTKLLRDYSKIDVRLRQLAFIVKHWAKSRGVNET 490
BLAST of mRNA_D-mesarthrocarpus_Contig9750.3.1 vs. uniprot
Match: A0A5N6MVH1_9ASTR (Uncharacterized protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6MVH1_9ASTR) HSP 1 Score: 77.0 bits (188), Expect = 9.280e-15 Identity = 37/73 (50.68%), Postives = 57/73 (78.08%), Query Frame = 1 Query: 1 VRAVSRARVPVVKMVSSLRGPDSMPLKCDISINNLVAVHNTRLLRLYTLLDVRVRQLLYLVKAWSKARAVNDS 219 V+A++RARVP+VK++ + G + CDI +NNL+AV NT+LLR Y+ +DVR+RQL ++VK W+K+R VN++ Sbjct: 479 VQALTRARVPIVKLMDPVTG-----ISCDICVNNLLAVINTKLLRDYSKIDVRLRQLAFIVKHWAKSRGVNET 546
BLAST of mRNA_D-mesarthrocarpus_Contig9750.3.1 vs. uniprot
Match: UPI001CFC13D0 (UTP:RNA uridylyltransferase 1 n=1 Tax=Mangifera indica TaxID=29780 RepID=UPI001CFC13D0) HSP 1 Score: 77.0 bits (188), Expect = 9.280e-15 Identity = 38/73 (52.05%), Postives = 56/73 (76.71%), Query Frame = 1 Query: 1 VRAVSRARVPVVKMVSSLRGPDSMPLKCDISINNLVAVHNTRLLRLYTLLDVRVRQLLYLVKAWSKARAVNDS 219 V+A++RARVP+VK++ + G + CDI INNL+AV NT+LLR Y +DVR+RQL ++VK W+K+R VN++ Sbjct: 486 VQALTRARVPIVKLMDPVTG-----ISCDICINNLLAVVNTKLLRDYAQIDVRLRQLAFIVKHWAKSRGVNET 553 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9750.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig9750.3.1 >prot_D-mesarthrocarpus_Contig9750.3.1 ID=prot_D-mesarthrocarpus_Contig9750.3.1|Name=mRNA_D-mesarthrocarpus_Contig9750.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=75bp VRAVSRARVPVVKMVSSLRGPDSMPLKCDISINNLVAVHNTRLLRLYTLLback to top mRNA from alignment at D-mesarthrocarpus_Contig9750:2656..3608- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig9750.3.1 ID=mRNA_D-mesarthrocarpus_Contig9750.3.1|Name=mRNA_D-mesarthrocarpus_Contig9750.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=953bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9750:2656..3608- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9750:2656..3608- >mRNA_D-mesarthrocarpus_Contig9750.3.1 ID=mRNA_D-mesarthrocarpus_Contig9750.3.1|Name=mRNA_D-mesarthrocarpus_Contig9750.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=225bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9750:2656..3608- (Discosporangium mesarthrocarpum MT17_79)back to top |