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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Seed ortholog | 2880.D8LKI1 |
| PFAMs | Ank,Ank_2,Ank_3,Ank_4,Ank_5,Pkinase,Pkinase_Tyr |
| Model size | 291 |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K10380 |
| KEGG Pathway | ko04624,ko05205,map04624,map05205 |
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Evalue | 4.08e-13 |
| EggNOG OGs | COG0666@1|root,KOG4177@2759|Eukaryota |
| Ec32 ortholog description | Ankyrin repeat-containing domain |
| Ec32 ortholog | Ec-08_006150.3 |
| Description | spectrin binding |
| Cds size | 291 |
| COG category | I |
| BRITE | ko00000,ko00001,ko04812 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791126.6653278-CDS-D-mesarthrocarpus_Contig9740:3978..4269 | 1680791126.6653278-CDS-D-mesarthrocarpus_Contig9740:3978..4269 | Discosporangium mesarthrocarpum MT17_79 | CDS | D-mesarthrocarpus_Contig9740 3979..4269 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig9740.2.1 >prot_D-mesarthrocarpus_Contig9740.2.1 ID=prot_D-mesarthrocarpus_Contig9740.2.1|Name=mRNA_D-mesarthrocarpus_Contig9740.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=97bp
CGKKHKIRSLVKCLLGSRPLTLFSPPFFQADMDHAAAGGETPSILAARGG
HLSCLDVLEEAGADLDRPNAVGMTPLITASMHGRAQAVAFLAGLQGI back to topmRNA from alignment at D-mesarthrocarpus_Contig9740:3979..4269+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_D-mesarthrocarpus_Contig9740.2.1 ID=mRNA_D-mesarthrocarpus_Contig9740.2.1|Name=mRNA_D-mesarthrocarpus_Contig9740.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=291bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9740:3979..4269+ (Discosporangium mesarthrocarpum MT17_79)
TGCGGGAAAAAACACAAGATAAGGTCCCTTGTGAAATGCCTTCTTGGCTC
TCGACCGTTGACTCTCTTCAGCCCCCCCTTCTTCCAGGCGGACATGGATC
ATGCGGCTGCAGGGGGAGAAACCCCCTCCATACTTGCTGCCAGGGGGGGG
CACCTGTCCTGCCTCGATGTGCTCGAGGAGGCAGGCGCTGACCTCGACCG
CCCCAACGCCGTGGGCATGACCCCTCTCATCACTGCCAGCATGCACGGCC
GGGCACAGGCAGTGGCGTTCCTGGCCGGCCTTCAGGGGATT back to topCoding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9740:3979..4269+ >mRNA_D-mesarthrocarpus_Contig9740.2.1 ID=mRNA_D-mesarthrocarpus_Contig9740.2.1|Name=mRNA_D-mesarthrocarpus_Contig9740.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=291bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9740:3979..4269+ (Discosporangium mesarthrocarpum MT17_79)
TGCGGGAAAAAACACAAGATAAGGTCCCTTGTGAAATGCCTTCTTGGCTC
TCGACCGTTGACTCTCTTCAGCCCCCCCTTCTTCCAGGCGGACATGGATC
ATGCGGCTGCAGGGGGAGAAACCCCCTCCATACTTGCTGCCAGGGGGGGG
CACCTGTCCTGCCTCGATGTGCTCGAGGAGGCAGGCGCTGACCTCGACCG
CCCCAACGCCGTGGGCATGACCCCTCTCATCACTGCCAGCATGCACGGCC
GGGCACAGGCAGTGGCGTTCCTGGCCGGCCTTCAGGGGATT back to top
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