mRNA_D-mesarthrocarpus_Contig9740.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9740.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig9740.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9740.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9740contigD-mesarthrocarpus_Contig9740:627..1785 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LKI1
PFAMsAnk,Ank_2,Ank_3,Ank_4,Ank_5,Pkinase,Pkinase_Tyr
Model size663
Max annot lvl2759|Eukaryota
KEGG koko:K10380
KEGG Pathwayko04624,ko05205,map04624,map05205
Hectar predicted targeting categoryother localisation
Exons2
Evalue6.35e-22
EggNOG OGsCOG0666@1|root,KOG4177@2759|Eukaryota
Descriptionspectrin binding
Cds size660
COG categoryI
BRITEko00000,ko00001,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791126.6092932-CDS-D-mesarthrocarpus_Contig9740:626..9591680791126.6092932-CDS-D-mesarthrocarpus_Contig9740:626..959Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9740 627..959 +
1680791126.6229703-CDS-D-mesarthrocarpus_Contig9740:1457..17841680791126.6229703-CDS-D-mesarthrocarpus_Contig9740:1457..1784Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9740 1458..1784 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9740.1.1prot_D-mesarthrocarpus_Contig9740.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9740 627..1784 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9740.1.1

>prot_D-mesarthrocarpus_Contig9740.1.1 ID=prot_D-mesarthrocarpus_Contig9740.1.1|Name=mRNA_D-mesarthrocarpus_Contig9740.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=220bp
LGLGPATQSGAGHEGGVVALCWHPSGEVVASSGQDMSVWLWSTGGQALSA
IDTHRRWSAGVAFSGQGDALVSCGRFTLEGWATRVRVSCGQGQVATMAWR
QPGHLTAARAKISGASGLSTQAAQALRDHGATDWGSAASAALAVRGATAG
PGAGTLAQAVAAWGYTAALAELWSSAGGASALRLKDGCGRSALHYAVLGN
GAGPAAAMAVAAGARAGAEE
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mRNA from alignment at D-mesarthrocarpus_Contig9740:627..1785+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9740.1.1 ID=mRNA_D-mesarthrocarpus_Contig9740.1.1|Name=mRNA_D-mesarthrocarpus_Contig9740.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1159bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9740:627..1785+ (Discosporangium mesarthrocarpum MT17_79)
CTGGGGCTGGGGCCAGCCACCCAGAGTGGGGCAGGGCACGAGGGGGGCGT
GGTGGCGCTGTGCTGGCATCCGTCTGGGGAGGTGGTGGCATCCTCGGGGC
AGGACATGTCAGTCTGGCTTTGGAGCACTGGGGGGCAGGCCCTGAGCGCC
ATCGACACCCACCGGAGGTGGTCGGCAGGTGTGGCCTTCTCAGGGCAGGG
GGACGCTCTGGTCTCATGTGGGAGGTTCACTCTTGAGGGGTGGGCCACCC
GGGTGAGGGTGAGCTGTGGGCAGGGCCAGGTCGCTACCATGGCATGGCGG
CAGCCAGGGCACCTCACAGCGGCCAGGGCCAAGGTGCGTTCATGTTCGTG
GTCTCTTGGGGGTGCTTCTGGGTTACTGCTGGGGTCCTCTGGCGTGTTTG
GATGTTTTTTTAAATTATTGCTGTTGTGTGATGCGCTTGTTGCAAACCCT
AACCCTGTGCACTCCTGAAGGGCTTGCATGTAAGCAATTGAGTACAGGAG
TACTACAGTATTACTACAGTGCAGATGGTACAATAGTGCAGCATACTATG
CGTAAAAGTACTACAGTAGTGCAGCATACTATGCGTAAAAGTACTACAGT
AGTGCAGCATACTATGTATACCACAAGTACTACAGCATACCACAGTACGA
CTTCCATATTATGCTAAAAGTGCTGCAGTATGACTACAGTATACCACAGC
GTTACTACCACATTACTGCAGTATGACAAAGTACAAGCACCCTGATCCCA
ACACCGCCCATCACAGCACCCCCGGCAAAGAAAAAAAAACACCGTCCCCC
CTCCCCCCTCCCCTGCTCCCCCCGTGGACAGATCTCCGGGGCCTCTGGGC
TCTCGACCCAAGCCGCCCAGGCCCTCCGCGACCATGGTGCCACTGATTGG
GGATCCGCCGCCTCGGCTGCCCTGGCCGTCCGTGGTGCCACGGCTGGCCC
TGGGGCTGGCACCCTGGCCCAGGCAGTGGCCGCTTGGGGCTACACCGCAG
CCCTGGCAGAACTGTGGTCCTCGGCTGGGGGTGCATCTGCCCTGAGGCTC
AAAGATGGGTGTGGGCGGTCTGCCCTCCACTATGCGGTCCTTGGGAATGG
GGCAGGCCCAGCAGCAGCAATGGCGGTGGCGGCAGGGGCCAGGGCTGGGG
CTGAGGAAG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9740:627..1785+

>mRNA_D-mesarthrocarpus_Contig9740.1.1 ID=mRNA_D-mesarthrocarpus_Contig9740.1.1|Name=mRNA_D-mesarthrocarpus_Contig9740.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=660bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9740:627..1785+ (Discosporangium mesarthrocarpum MT17_79)
CTGGGGCTGGGGCCAGCCACCCAGAGTGGGGCAGGGCACGAGGGGGGCGT
GGTGGCGCTGTGCTGGCATCCGTCTGGGGAGGTGGTGGCATCCTCGGGGC
AGGACATGTCAGTCTGGCTTTGGAGCACTGGGGGGCAGGCCCTGAGCGCC
ATCGACACCCACCGGAGGTGGTCGGCAGGTGTGGCCTTCTCAGGGCAGGG
GGACGCTCTGGTCTCATGTGGGAGGTTCACTCTTGAGGGGTGGGCCACCC
GGGTGAGGGTGAGCTGTGGGCAGGGCCAGGTCGCTACCATGGCATGGCGG
CAGCCAGGGCACCTCACAGCGGCCAGGGCCAAGATCTCCGGGGCCTCTGG
GCTCTCGACCCAAGCCGCCCAGGCCCTCCGCGACCATGGTGCCACTGATT
GGGGATCCGCCGCCTCGGCTGCCCTGGCCGTCCGTGGTGCCACGGCTGGC
CCTGGGGCTGGCACCCTGGCCCAGGCAGTGGCCGCTTGGGGCTACACCGC
AGCCCTGGCAGAACTGTGGTCCTCGGCTGGGGGTGCATCTGCCCTGAGGC
TCAAAGATGGGTGTGGGCGGTCTGCCCTCCACTATGCGGTCCTTGGGAAT
GGGGCAGGCCCAGCAGCAGCAATGGCGGTGGCGGCAGGGGCCAGGGCTGG
GGCTGAGGAA
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