mRNA_D-mesarthrocarpus_Contig974.7.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig974.7.1
Unique NamemRNA_D-mesarthrocarpus_Contig974.7.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig974.7.1 vs. uniprot
Match: UPI001CF1F378 (protein ALP1-like isoform X1 n=3 Tax=Acropora TaxID=6127 RepID=UPI001CF1F378)

HSP 1 Score: 95.1 bits (235), Expect = 3.600e-19
Identity = 57/172 (33.14%), Postives = 87/172 (50.58%), Query Frame = 1
Query:    1 GMEAFLVFLFRLRYPNRLDDVSIRMGRKYTQMRRVVKDMVDILVKMFGHMPTDGIGVWATHFDRGTSVIRPKAVVEEICCFVDGTLRPHCK*IGDIANAATHSEYKRNIEFQGVVLPNGIIADLWGPTVGCCHDGYLMGRSR*NDRLRDSQEGNPAQSYTYGHAAYVVMSHI 516
            GMEA LV L RL YPNRL D+S   GR   ++  ++ ++++ L   F H+  D    W        ++    + +     F+DGTLRP C+ I +     +  +    ++FQ VV PNG+IA+L+GP  G  HD +++  S    RL+      P  +  YG  AY +  HI
Sbjct:   79 GMEAMLVLLRRLTYPNRLCDLSPLFGRAEPELSMIIHEVLNDLYNRFHHLLEDLDQNWIDVQAFSDAIHDAGSPLPNCWGFIDGTLRPCCRPIQNQRILFSGHKRTHGLKFQSVVCPNGLIANLFGPVAGRHHDAFMLHESNLIPRLQAKFAALPIFTL-YGDPAYPLCQHI 249          
BLAST of mRNA_D-mesarthrocarpus_Contig974.7.1 vs. uniprot
Match: UPI00106AADC3 (uncharacterized protein LOC114518596 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106AADC3)

HSP 1 Score: 91.3 bits (225), Expect = 2.100e-18
Identity = 52/173 (30.06%), Postives = 91/173 (52.60%), Query Frame = 1
Query:    1 GMEAFLVFLFRLRYPNRLDDVSIRMGRKYTQMRRVVKDMVDILVKMFGHMPTDGIGVWATHFDRGTSVIRPKAVVEEICCFVDGTLRPHCK*IGDIANAATHSEYKRNIEFQGVVLPNGIIADLWGPTVGCCHDGYLMGRSR*NDRLRDSQEGNPAQSYT-YGHAAYVVMSHI 516
            G+EAFL+ L RL YPNRL D+    GR   ++  +V  +++ + + + ++  +    W        ++    + ++    F+DGTLRP C+ I +     +  +    ++FQ VV PNG+I++L+GP  G  HD +++  S+   +L D     P Q +T YG  AY +  H+
Sbjct:   56 GLEAFLILLRRLTYPNRLSDLCFLFGRPEPELSMIVHQILNDIYERYHYLLEELDQNWIQVDVFARAIHDSGSPIKNGWGFIDGTLRPCCRPIRNQRILFSGHKRVHGLKFQSVVCPNGLISNLYGPIAGKHHDAFMLHESKLLPKLEDYFR--PPQIFTLYGDPAYPLRPHL 226          
BLAST of mRNA_D-mesarthrocarpus_Contig974.7.1 vs. uniprot
Match: UPI00106BE0C6 (protein ALP1-like isoform X1 n=2 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106BE0C6)

HSP 1 Score: 92.4 bits (228), Expect = 4.100e-18
Identity = 52/173 (30.06%), Postives = 91/173 (52.60%), Query Frame = 1
Query:    1 GMEAFLVFLFRLRYPNRLDDVSIRMGRKYTQMRRVVKDMVDILVKMFGHMPTDGIGVWATHFDRGTSVIRPKAVVEEICCFVDGTLRPHCK*IGDIANAATHSEYKRNIEFQGVVLPNGIIADLWGPTVGCCHDGYLMGRSR*NDRLRDSQEGNPAQSYT-YGHAAYVVMSHI 516
            G+EAFL+ L RL YPNRL D+    GR   ++  +V  +++ + + + ++  +    W        ++    + ++    F+DGTLRP C+ I +     +  +    ++FQ VV PNG+I++L+GP  G  HD +++  S+   +L D     P Q +T YG  AY +  H+
Sbjct:   95 GLEAFLILLRRLTYPNRLSDLCFLFGRPEPELSMIVHQILNDIYERYHYLLEELDQNWIQVDVFARAIHDSGSPIKNCWGFIDGTLRPCCRPIRNQRILFSGHKRVHGLKFQSVVCPNGLISNLYGPIAGKHHDAFMLHESKLLPKLEDLFR--PPQIFTLYGDPAYPLRPHL 265          
BLAST of mRNA_D-mesarthrocarpus_Contig974.7.1 vs. uniprot
Match: V3ZW95_LOTGI (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Lottia gigantea TaxID=225164 RepID=V3ZW95_LOTGI)

HSP 1 Score: 87.8 bits (216), Expect = 3.340e-17
Identity = 53/173 (30.64%), Postives = 93/173 (53.76%), Query Frame = 1
Query:    1 GMEAFLVFLFRLRYPNRLDDVSIRMGRKYTQMRRVVKDMVDILVKMFGHMPTDGIGVWA---THFDRGTSVIRPKAVVEEICCFVDGTLRPHCK*IGDIANAATHSEYKRN--IEFQGVVLPNGIIADLWGPTVGCCHDGYLMGRSR*NDRLRDSQEGNPAQSYTYGHAAYVV 504
            G EA+ VFL RL YPNRL D+    GR  T +  +VK++ ++++   GH+ +     W    +      +V R  A ++    F+DGT+R  C+    +     ++ +KR   +++Q +VLPNG+IA+++GP  G  HD  L+   R ++++ + + G   +   YG  AY +
Sbjct:   45 GTEAYCVFLRRLVYPNRLSDIEPMFGRHRTTLSMIVKEVTNLIMDTHGHLLSSLQQPWLNLQSLQSYADAVNRKGAPLKNCIGFIDGTVRLICR--PTVNQRIVYNGHKRTHALKYQSIVLPNGLIANMYGPIEGRRHDSALL---RLSEKMENLEVGG--RFTLYGDPAYPI 210          
BLAST of mRNA_D-mesarthrocarpus_Contig974.7.1 vs. uniprot
Match: UPI001CF223A5 (uncharacterized protein LOC122949353 isoform X1 n=3 Tax=Acropora TaxID=6127 RepID=UPI001CF223A5)

HSP 1 Score: 87.8 bits (216), Expect = 2.620e-16
Identity = 60/201 (29.85%), Postives = 95/201 (47.26%), Query Frame = 1
Query:    1 GMEAFLVFLFRLRYPNRLDDVSIRMGRKYTQMRRVVKDMVDILVKMFGHMPTDGIGVWATHFDRGTSVIRPKAVVEEICCFVDGTLRPHCK*IGDIANAATHSEYKRN--IEFQGVVLPNGIIADLWGPTVGCCHDGYLMGRSR*NDRLRDSQEGNPAQSYTYGHAAYVVMSHIKRRFNKRQLVS--ARVNRRKMKTRVCI 591
            GMEA ++ L RL YPNR  D+    GR  +++  +   ++D +   F H+  +   VW        +V    A +     F+DGT RP  + + +      +S +KR   ++FQ V  PNG+IA ++GP  G  HD +++G S  + +LR   + N      YG  AY +  +I   F +  L       N R  K R C+
Sbjct:  136 GMEALMILLKRLAYPNRWCDLVPVFGRTVSELSLIFNKIMDDIYDRFHHLVDNLDLVWLDPEAFADAVYEKGAPLTGCWGFIDGTPRPIARPVRN--QRIMYSGHKRTHCLKFQSVQAPNGMIAHMFGPIEGRRHDAFMLGVSGLSAKLRRFVQHNGEPYVIYGDPAYGITQNIISPFRQAHLTDDEQEFNTRMSKVRTCV 334          
BLAST of mRNA_D-mesarthrocarpus_Contig974.7.1 vs. uniprot
Match: UPI001CF4D5AE (uncharacterized protein LOC122952212 n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF4D5AE)

HSP 1 Score: 86.3 bits (212), Expect = 3.050e-16
Identity = 60/201 (29.85%), Postives = 94/201 (46.77%), Query Frame = 1
Query:    1 GMEAFLVFLFRLRYPNRLDDVSIRMGRKYTQMRRVVKDMVDILVKMFGHMPTDGIGVWATHFDRGTSVIRPKAVVEEICCFVDGTLRPHCK*IGDIANAATHSEYKRN--IEFQGVVLPNGIIADLWGPTVGCCHDGYLMGRSR*NDRLRDSQEGNPAQSYTYGHAAYVVMSHIKRRFNKRQLVS--ARVNRRKMKTRVCI 591
            GMEA ++ L RL YPNR  D+    GR  +++  +   ++D +   F H+  +   VW        +V    A +     F+DGT RP  + + +      +S +KR   ++FQ V  PNG+IA ++GP  G  HD +++G S  + +LR   + N      YG  AY +  +I   F    L       N R  K R C+
Sbjct:   24 GMEALMILLRRLAYPNRWCDLVPVFGRTVSELSLLFNKIMDDIYDRFHHLVDNLDLVWLDPEAFADAVYEKGAPLTGCWGFIDGTPRPIARPVRN--QRIMYSGHKRTHCLKFQSVQAPNGMIAHMFGPIEGRQHDAFMLGVSGLSAKLRRFVQHNGEPYVIYGDPAYGITQNIISPFRHAHLADDEQEFNTRMSKVRTCV 222          
BLAST of mRNA_D-mesarthrocarpus_Contig974.7.1 vs. uniprot
Match: UPI00106A10C3 (uncharacterized protein LOC114539446 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106A10C3)

HSP 1 Score: 86.7 bits (213), Expect = 4.170e-16
Identity = 61/186 (32.80%), Postives = 91/186 (48.92%), Query Frame = 1
Query:    1 GMEAFLVFLFRLRYPNRLDDVSIRMGRKYTQMRRVVKDMVDILVKMFGHMPTDGIGVWATHFDRGTSVIRPKAVVEEICCFVDGTLRPHCK*IGDIANAATHSEYKRN--IEFQGVVLPNGIIADLWGPTVGCCHDGYLMGRSR*NDRLR---DSQEGNPAQSYTYGHAAYVVMSHIKRRFNKRQL 543
             MEA ++ L RL YPNR  D+S   GR   +M  +  ++V+ L   F  + T     W        ++    A +     F+DGT RP C+ I   +     S +KR   I+FQ VV PNG+I +L+GP  G  HD +++  S   ++L+   +++ G P     YG  AY V SH+   F   QL
Sbjct:   76 SMEALMILLRRLAYPNRWCDLSGIFGRPEPEMSLIFNEIVNDLYNRFSFLLTQLNLAWLDPQIFCDAIHARGAPLRNCWGFIDGTARPICRPI--FSQRIMFSGHKRTHCIKFQSVVTPNGLICNLFGPIEGRRHDAFMLTASGLLEQLQLHMNNENGEPF--VLYGDPAYPVRSHLLAPFRGAQL 257          
BLAST of mRNA_D-mesarthrocarpus_Contig974.7.1 vs. uniprot
Match: UPI000C6E5BCA (protein ALP1-like n=1 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6E5BCA)

HSP 1 Score: 86.7 bits (213), Expect = 4.980e-16
Identity = 65/217 (29.95%), Postives = 103/217 (47.47%), Query Frame = 1
Query:    1 GMEAFLVFLFRLRYPNRLDDVSIRMGRKYTQMRRVVKDMVDILVKMFGHM--PTDGIGVWATHFDRGTSVIRPKAVVEEICC-FVDGTLRPHCK*IGDIANAATHSEYKRN--IEFQGVVLPNGIIADLWGPTVGCCHDGYLMGRSR*NDRLRDSQ-EGNPAQSYTYGHAAYVVMSHIKRRFNKRQLVSAR--VNRRKMKTRVCIG*VWKSCSEKWA 627
            G++A  + L RL YPNRLDD+S+ +GR   ++ R V + V+I+      +    + I +     +  + +I  K      C  F+DGT+RP C+ I         S +KR   ++FQ VV P+G+IA+L+GP  G  HD  ++  S   + L       N  Q   YG + Y +  H+   F    L   +   N R    R C+  V+    +K+A
Sbjct:   91 GIDALCILLRRLAYPNRLDDISVLLGRSKDELSRFVHETVNIIYNSRSKLLLNINEIKLTREKLNLFSQIITAKGAPLTNCWGFIDGTVRPICRPIRH--QRVVFSGHKRIHCLKFQSVVTPDGMIANLFGPIEGRRHDSGMLRESNLLEHLAAIPCSENGTQFVLYGDSGYPLRQHLITPFRGASLTPEQQVFNSRMSSVRECVEWVFGKIIQKFA 305          
BLAST of mRNA_D-mesarthrocarpus_Contig974.7.1 vs. uniprot
Match: UPI0010697461 (uncharacterized protein LOC114533238 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI0010697461)

HSP 1 Score: 84.0 bits (206), Expect = 1.030e-15
Identity = 54/174 (31.03%), Postives = 87/174 (50.00%), Query Frame = 1
Query:    1 GMEAFLVFLFRLRYPNRLDDVSIRMGRKYTQMRRVVKDMVDILVKMFGHMPTDGIGVWATHFDRGTSVIRPKAVVEEICCFVDGTLRPHCK*IGDIANAATHSEYKRN--IEFQGVVLPNGIIADLWGPTVGCCHDGYLMGRSR*NDRLRDSQEGNPAQSYTYGHAAYVVMSHI 516
            GMEA ++ L RL YPNR  D+    GR  +++  +   ++D +   F ++      VW        ++    A + +   F+DGT+RP  + I +       S +KR   I+FQ V  PNG+IA+++GP  G  HD +++G S   D+L   ++ N      YG  AY V  +I
Sbjct:   24 GMEALMILLRRLVYPNRWCDLVSIFGRSESELSLIFNKILDDICDRFSYLLDSLDLVWFDPELFSNAIHNKGAPLTQCLGFIDGTVRPIPRPIRN--QQIMFSGHKRTHCIKFQSVHAPNGLIANMFGPVEGRRHDAFILGVSNLADKLCRIRQPNGEPYIIYGDPAYGVTDNI 195          
BLAST of mRNA_D-mesarthrocarpus_Contig974.7.1 vs. uniprot
Match: UPI00106C0330 (uncharacterized protein LOC114542457 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106C0330)

HSP 1 Score: 84.7 bits (208), Expect = 2.350e-15
Identity = 58/201 (28.86%), Postives = 97/201 (48.26%), Query Frame = 1
Query:    1 GMEAFLVFLFRLRYPNRLDDVSIRMGRKYTQMRRVVKDMVDILVKMFGHMPTDGIGVWATHFDRGTSVIRPKAVVEEICCFVDGTLRPHCK*IGDIANAATHSEYKRN--IEFQGVVLPNGIIADLWGPTVGCCHDGYLMGRSR*NDRLRDSQEGNPAQSYTYGHAAYVVMSHIKRRFNKRQLVS--ARVNRRKMKTRVCI 591
            GMEA ++ L RL YPNR  D+    GR  +Q+  +   ++D +   FGH+      VW        ++    A + +   F+DGT+RP  + +  +     +S +KR   I+FQ V  PNG+I + +GP  G  HD +++  S   ++L++ +  +      YG  AY +   I   +   QL    +  N+R  K RV +
Sbjct:   92 GMEALMILLRRLAYPNRWCDLVGIFGRSESQLSLIFNKILDDIYNRFGHLLDSLDLVWLDPECFAQAIHCQGAPLTQCWAFIDGTVRPIARPV--VNQDIMYSGHKRVHCIKFQAVHAPNGLIVNWFGPIEGRRHDAFMLSVSGLTEKLQNIETPDGELYVLYGDPAYGINDCILAPYRGAQLTQNQSEFNKRMSKVRVSV 290          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig974.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001CF1F3783.600e-1933.14protein ALP1-like isoform X1 n=3 Tax=Acropora TaxI... [more]
UPI00106AADC32.100e-1830.06uncharacterized protein LOC114518596 n=1 Tax=Dendr... [more]
UPI00106BE0C64.100e-1830.06protein ALP1-like isoform X1 n=2 Tax=Dendronephthy... [more]
V3ZW95_LOTGI3.340e-1730.64DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
UPI001CF223A52.620e-1629.85uncharacterized protein LOC122949353 isoform X1 n=... [more]
UPI001CF4D5AE3.050e-1629.85uncharacterized protein LOC122952212 n=1 Tax=Acrop... [more]
UPI00106A10C34.170e-1632.80uncharacterized protein LOC114539446 n=1 Tax=Dendr... [more]
UPI000C6E5BCA4.980e-1629.95protein ALP1-like n=1 Tax=Centruroides sculpturatu... [more]
UPI00106974611.030e-1531.03uncharacterized protein LOC114533238 n=1 Tax=Dendr... [more]
UPI00106C03302.350e-1528.86uncharacterized protein LOC114542457 n=1 Tax=Dendr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig974contigD-mesarthrocarpus_Contig974:14900..15686 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size773
Hectar predicted targeting categoryother localisation
Exons2
Cds size273
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791126.5186436-UTR-D-mesarthrocarpus_Contig974:14899..149021680791126.5186436-UTR-D-mesarthrocarpus_Contig974:14899..14902Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig974 14900..14902 +
1680791126.5644293-UTR-D-mesarthrocarpus_Contig974:15189..156861680791126.5644293-UTR-D-mesarthrocarpus_Contig974:15189..15686Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig974 15190..15686 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791126.5338748-CDS-D-mesarthrocarpus_Contig974:14902..151231680791126.5338748-CDS-D-mesarthrocarpus_Contig974:14902..15123Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig974 14903..15123 +
1680791126.5507207-CDS-D-mesarthrocarpus_Contig974:15137..151891680791126.5507207-CDS-D-mesarthrocarpus_Contig974:15137..15189Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig974 15138..15189 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig974.7.1prot_D-mesarthrocarpus_Contig974.7.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig974 14903..15189 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig974.7.1

>prot_D-mesarthrocarpus_Contig974.7.1 ID=prot_D-mesarthrocarpus_Contig974.7.1|Name=mRNA_D-mesarthrocarpus_Contig974.7.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=91bp
MEAFLVFLFRLRYPNRLDDVSIRMGRKYTQMRRVVKDMVDILVKMFGHMP
TDGIGVWATHFDRGTSVIRPKAVVEEICCFVDGTLRPHCK*
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mRNA from alignment at D-mesarthrocarpus_Contig974:14900..15686+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig974.7.1 ID=mRNA_D-mesarthrocarpus_Contig974.7.1|Name=mRNA_D-mesarthrocarpus_Contig974.7.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=787bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig974:14900..15686+ (Discosporangium mesarthrocarpum MT17_79)
GGAATGGAAGCATTCCTCGTTTTCTTGTTCAGACTGAGGTATCCAAACCG CCTGGACGACGTGTCAATTCGCATGGGGAGGAAGTACACCCAAATGAGAA GGGTTGTGAAGGACATGGTGGATATATTGGTAAAGATGTTTGGACACATG CCTACCGATGGCATTGGGGTGTGGGCTACCCACTTCGATCGGGGGACAAG TGTAATCCGACCTAAGGCGGTGGTGTAGGACCACGAAGTGAAGAGATTTG CTGCTTTGTTGATGGCACCCTTAGGCCTCATTGTAAATGAATTGGCGATA TTGCAAATGCCGCTACTCACTCAGAGTATAAGAGAAACATCGAGTTCCAA GGGGTGGTGTTGCCCAATGGCATCATTGCTGATTTGTGGGGCCCAACAGT CGGGTGTTGTCATGACGGCTACCTCATGGGGAGGAGTAGATAGAATGACA GACTGAGAGATAGCCAAGAGGGCAACCCTGCCCAGTCCTATACTTATGGG CATGCGGCCTATGTAGTCATGTCCCATATCAAGAGGAGATTCAACAAACG GCAGCTGGTCTCAGCCAGAGTCAATCGAAGGAAAATGAAAACAAGAGTGT GTATAGGGTAGGTGTGGAAATCGTGTTCGGAAAAGTGGGCGATCTCTGGG GATTCCTAGATCACAAGAGGAACTTGGAACATATGCAGAACACTGCAGGT GACCTTTACCTAGCGGGAGTGCTCTTGACTAACATTGACACTTGCAAGTA TGGCAGCCAAGTAACAGAGTACTACTGTGAACTCCCC
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig974:14900..15686+

>mRNA_D-mesarthrocarpus_Contig974.7.1 ID=mRNA_D-mesarthrocarpus_Contig974.7.1|Name=mRNA_D-mesarthrocarpus_Contig974.7.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=273bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig974:14900..15686+ (Discosporangium mesarthrocarpum MT17_79)
ATGGAAGCATTCCTCGTTTTCTTGTTCAGACTGAGGTATCCAAACCGCCT
GGACGACGTGTCAATTCGCATGGGGAGGAAGTACACCCAAATGAGAAGGG
TTGTGAAGGACATGGTGGATATATTGGTAAAGATGTTTGGACACATGCCT
ACCGATGGCATTGGGGTGTGGGCTACCCACTTCGATCGGGGGACAAGTGT
AATCCGACCTAAGGCGGTGGTTGAAGAGATTTGCTGCTTTGTTGATGGCA
CCCTTAGGCCTCATTGTAAATGA
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