mRNA_D-mesarthrocarpus_Contig974.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig974.2.1 vs. uniprot
Match: D7G099_ECTSI (Phosphodiesterase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G099_ECTSI) HSP 1 Score: 205 bits (521), Expect = 2.650e-53 Identity = 165/378 (43.65%), Postives = 218/378 (57.67%), Query Frame = 1 Query: 268 PLTMDQLSSLLDGSMQGSI----GALFCRAEAVLAKLTAATSVDLFLVDHWHKKLFSFF-ATSSASPGGXXXXXXXXXXAHCVGAXXXXXXXXXXXXEM--------TSYDTRSAKFVAGGPPCEAARLGEELEVPVYPEKSSLGREKSL---GHEQGTVYCWPVLD-PT----MSQHAGSQVQEALMELPCGNTAKAETNTPATVSLVDIAPRGDVLAVVQVYLEDGGLSEAMRVAVRKTCLLLGSLVKGSLTRCLEDVRCRTAEVLLSLTEVSSRERGLMEVVQDVVNAAEQITGAERVCLFFVDDQANELWVARSIEFDDAKVKIGHGICGTAAATGEVMNVVNSYENPHFDPSFDKQTGFRTKSVLCVPIPPPE 1338 PLT++Q+ LL+ + S AL CR E +L + T ATS D LVD W KL F AT+S XXXXXXXXXX XXXXXXXXXXXX +++TR+ + G AA G +L++ + R +L + G+V WPV PT A + E L ++ + + +P P VLAV+QV+ DG LS A A+ LL L+ +L R E VR R+ E LLSL+ +S R+ GL+ +V++VV A+ +T AERVCLFFVDD A+ELWVA+S++FDDAK+KIG G+CG AAATG +NV++SYE+P FD +DKQTGF TK VLCVPIPPP+ Sbjct: 7 PLTVEQIIELLESTAADSPLISPAALLCRVEGLLLRGTGATSADALLVDRWFNKLLHFSPATASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHEVAFNTRAVCDIGEGIAGMAAMTGRKLQLKDCSTRQQRRRGNTLYGTEYTSGSVVSWPVSALPTEVGVRQAEAETSAFEQLEDVDGDDETEEARPSPG--------PAERVLAVLQVHCGDGVLSAAAVEALHDLGRLLVPLLTEALARDEEYVRRRSTEALLSLSNISPRDVGLIAMVEEVVRVAQIMTEAERVCLFFVDDAADELWVAKSVDFDDAKIKIGEGLCGHAAATGGTVNVIDSYEDPRFDGRWDKQTGFVTKGVLCVPIPPPD 376
BLAST of mRNA_D-mesarthrocarpus_Contig974.2.1 vs. uniprot
Match: D7G095_ECTSI (Phosphodiesterase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G095_ECTSI) HSP 1 Score: 191 bits (485), Expect = 6.410e-49 Identity = 162/388 (41.75%), Postives = 212/388 (54.64%), Query Frame = 1 Query: 268 PLTMDQLSSLLDGSMQGSI----GALFCRAEAVLAKLTAATSVDLFLVDHWHKKLFSFF-ATSSASPGGXXXXXXXXXXAHCVGAXXXXXXXXXXXXEM-----------TSYDTRSAKFVAGGPPCEAARLGEELEVPVYPEKSSLGREKSL---GHEQGTVYCWPVLDPTMSQHAGSQVQEALMELPCGNTAKAETNTPATVSLVDI-------------APRGDVLAVVQVYLEDGGLSEAMRVAVRKTCLLLGSLVKGSLTRCLEDVRCRTAEVLLSLTEVSSRERGLMEVVQDVVNAAEQITGAERVCLFFVDDQANELWVARSIEFDDAKVKIGHGICGTAAATGEVMNVVNSYENPHFDPSFDKQTGFRTKSVLCVPIPPP 1335 PL +Q+ LL+ + S AL CR E +L + T AT D LVD W KL F AT+S XXXXXXXXXX XXXXXXXXXXXX +++TR+ + G AA G +L + + R K+L + G+V CWPV + + G T +AE T A L D+ P VLAV+QV+ DG LS A A+ LL L+ +L R E +R R+ E LLSL+ +S R+ GL+ +V++VV+AA+ +T AERVCLFFVDD ++LWVA S+ F+D K+KIG G+CG AAATG +NV++SYE+P F +DKQTGF TK VLCVPIPPP Sbjct: 14 PLRFEQIIELLESTAADSPLISPAALLCRVEGLLLRGTGATRADALLVDRWFNKLLHFSPATASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHEVAFNTRAVCDIGEGIAGMAAMTGRKLRLKDCSTRQQRRRGKALYGTEYTSGSVVCWPV---------------SALPTEVGVT-RAEAETSAFEQLEDVDGDDETEEARPSPGPAERVLAVLQVHCADGVLSAAAVEALHGLGRLLVPLLTEALARDEEYMRRRSTEALLSLSIISPRDVGLIAMVEEVVDAAQVMTEAERVCLFFVDDAEHKLWVATSVGFEDPKIKIGEGLCGHAAATGGTVNVIDSYEDPRFVGRWDKQTGFVTKGVLCVPIPPP 385
BLAST of mRNA_D-mesarthrocarpus_Contig974.2.1 vs. uniprot
Match: A0A6H5KY22_9PHAE (Phosphodiesterase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY22_9PHAE) HSP 1 Score: 155 bits (392), Expect = 1.470e-36 Identity = 128/353 (36.26%), Postives = 179/353 (50.71%), Query Frame = 1 Query: 328 ALFCRAEAVLAKLTAATSVDLFLVDHWHKKLFSFFATSSASPGGXXXXXXXXXXA-----------HCVGAXXXXXXXXXXXXEMTSYDTRSAKFVAGGPPCEAARLGEELEVPVYPEKSSLGREKSL---GHEQGTVYCWPVLDPTMSQHAGSQVQEALMELPCGNTAKAETNTPATVSLVDI-------------APRGDVLAVVQVYLEDGGLSEAMRVAVRKTCLLLGSLVKGSLTRCLEDVRCRTAEVLLSLTEVSSRERGLMEVVQDVVNAAEQITGAERVCLFFVDDQANELWVARSIEFDDAKVKIGHGICGTAAATGEVMNVVNSYENPHFDPSFDKQTGFRTK 1305 AL R E +L + T ATSVD LVD W KL F +++ XXXXXXXXXX H +++TR+ + G AA G +L++ + R K+L + G+V CWPV + + G T +AE T A L D+ P VLAV++V+ DG LS A A+ LL L+ +L R E +R R+ E LLSL+ +S R+ GL+ +V++VV+AA+ +T AERV LFFVDD ++LWVA S+ F+D K+KIG G+CG AAATG +NV++S ++P +DKQTGF K Sbjct: 24 ALLGRVEGLLLRGTGATSVDALLVDRWFNKLLHFSPATASXXXXXXXXXXXXXXTPIRDRRSFSDGHGGSQCQNKLKQQQQRQHEVAFNTRAVCDIGEGIAGMAAMTGRKLQLKDCSTRQQRRRGKTLYGTKYTSGSVVCWPV---------------SALPTEVGVT-RAEAETSALEQLEDVDGDDETEEARPSPGPAERVLAVLRVHCVDGVLSAAAVEALHGLGRLLVPLLTEALARDEEYMRRRSTEALLSLSSISPRDVGLIAMVEEVVHAAQVMTEAERVRLFFVDDAEHKLWVATSVGFEDPKIKIGEGLCGHAAATGRTVNVIDSCKDPRSVGRWDKQTGFVAK 360
BLAST of mRNA_D-mesarthrocarpus_Contig974.2.1 vs. uniprot
Match: A0A2W0B0J5_9BACT (Adenylate/guanylate cyclase domain-containing protein (Fragment) n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2W0B0J5_9BACT) HSP 1 Score: 95.5 bits (236), Expect = 3.490e-17 Identity = 46/121 (38.02%), Postives = 79/121 (65.29%), Query Frame = 1 Query: 976 EDVRCR--TAEVLLSLTEVSSRERGLMEVVQDVVNAAEQITGAERVCLFFVDDQANELW--VARSIEFDDAKVKIGHGICGTAAATGEVMNVVNSYENPHFDPSFDKQTGFRTKSVLCVPI 1326 E++R R +E LL + + + E + E+++ +VN+ ++ AER LF +D + +LW VA+ +E + +V IG GI G A TGE +N+ ++Y +P F+P DK++GFRT+S+LC+P+ Sbjct: 203 EEIRKRMEVSETLLKVMKSVASELHIDELLKKIVNSTSEVMNAERASLFLLDPKTGDLWSKVAQGMESMEIRVPIGVGIAGHVAMTGETINIEDAYADPRFNPEIDKRSGFRTRSMLCMPL 323
BLAST of mRNA_D-mesarthrocarpus_Contig974.2.1 vs. uniprot
Match: A0A2W0BZU0_9BACT (Adenylate/guanylate cyclase domain-containing protein n=3 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2W0BZU0_9BACT) HSP 1 Score: 95.5 bits (236), Expect = 5.560e-17 Identity = 46/121 (38.02%), Postives = 79/121 (65.29%), Query Frame = 1 Query: 976 EDVRCR--TAEVLLSLTEVSSRERGLMEVVQDVVNAAEQITGAERVCLFFVDDQANELW--VARSIEFDDAKVKIGHGICGTAAATGEVMNVVNSYENPHFDPSFDKQTGFRTKSVLCVPI 1326 E++R R +E LL + + + E + E+++ +VN+ ++ AER LF +D + +LW VA+ +E + +V IG GI G A TGE +N+ ++Y +P F+P DK++GFRT+S+LC+P+ Sbjct: 203 EEIRKRMEVSETLLKVMKSVASELHIDELLKKIVNSTSEVMNAERASLFLLDPKTGDLWSKVAQGMESMEIRVPIGVGIAGHVAMTGETINIEDAYADPRFNPEIDKRSGFRTRSMLCMPL 323
BLAST of mRNA_D-mesarthrocarpus_Contig974.2.1 vs. uniprot
Match: A0A534UXJ8_9DELT (GAF domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534UXJ8_9DELT) HSP 1 Score: 94.4 bits (233), Expect = 8.790e-17 Identity = 44/116 (37.93%), Postives = 72/116 (62.07%), Query Frame = 1 Query: 985 RCRTAEVLLSLTEVSSRERGLMEVVQDVVNAAEQITGAERVCLFFVDDQANELW--VARSIEFDDAKVKIGHGICGTAAATGEVMNVVNSYENPHFDPSFDKQTGFRTKSVLCVPI 1326 + R + LL + + + E L ++Q +V A ++ AER LF D NELW + +E ++ +V +G GI G A T ++N+ ++Y +P FDP+FDKQTG+RT+S+LC+P+ Sbjct: 9 QARNLKALLGVAKALASEIKLDNLLQVIVAKAAEVMDAERATLFLYDKPRNELWSKTTQKLEINEIRVPLGVGIAGIVAKTRALINISDAYADPRFDPTFDKQTGYRTRSILCLPL 124
BLAST of mRNA_D-mesarthrocarpus_Contig974.2.1 vs. uniprot
Match: A0A1F9X6I0_9BACT (Uncharacterized protein n=1 Tax=Elusimicrobia bacterium RIFOXYA2_FULL_39_19 TaxID=1797957 RepID=A0A1F9X6I0_9BACT) HSP 1 Score: 93.6 bits (231), Expect = 1.540e-16 Identity = 40/109 (36.70%), Postives = 71/109 (65.14%), Query Frame = 1 Query: 1006 LLSLTEVSSRERGLMEVVQDVVNAAEQITGAERVCLFFVDDQANELW--VARSIEFDDAKVKIGHGICGTAAATGEVMNVVNSYENPHFDPSFDKQTGFRTKSVLCVPI 1326 LL ++ + ++E L +++ +++ ++ AER LF D NELW +A+ +E + ++ +G GI G A TG+++N+ ++Y +P FD + DK TGF+T+SVLCVP+ Sbjct: 100 LLEISRLLTKETSLNKLLNLIIDQTTKLMDAERTTLFLYDSDTNELWSYIAQDLEIKEIRLPLGRGIAGNVAKTGKMINIRDAYADPRFDDNLDKNTGFKTRSVLCVPL 208
BLAST of mRNA_D-mesarthrocarpus_Contig974.2.1 vs. uniprot
Match: A0A482UP70_9ARCH (GAF domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UP70_9ARCH) HSP 1 Score: 93.6 bits (231), Expect = 2.520e-16 Identity = 57/148 (38.51%), Postives = 87/148 (58.78%), Query Frame = 1 Query: 883 DGGLSEAMRVAVRKTCLLLGSLVKGSLTRCLEDVRCRTAEVLLSLTEVSSRERGLMEVVQDVVNAAEQITGAERVCLFFVDDQANELWVARSIEFDDAKVKIGHGICGTAAATGEVMNVVNSYENPHFDPSFDKQTGFRTKSVLCVPI 1326 D ++E++ V+V C G L S+TR R AE LL + + E +V+Q V+ AA A+R+ +F VD+ +EL+ S + A++ + +G+ G AA TGEV++V ++YE+P FD S D TG+RTKSVLC+PI Sbjct: 402 DAAVAESLSVSVGM-CFQRGVLFT-SITRAR-----RKAEALLEVVRGTRLESNFDKVLQRVLAAAYHAISADRMSVFLVDEARSELYCTYSKDIQGARLSMRNGLVGCAARTGEVVHVSDAYEDPRFDRSMDTATGYRTKSVLCLPI 542
BLAST of mRNA_D-mesarthrocarpus_Contig974.2.1 vs. uniprot
Match: A0A1G1F8T1_9BACT (GGDEF domain-containing protein n=2 Tax=Nitrospirae TaxID=40117 RepID=A0A1G1F8T1_9BACT) HSP 1 Score: 91.3 bits (225), Expect = 2.780e-16 Identity = 46/144 (31.94%), Postives = 79/144 (54.86%), Query Frame = 1 Query: 1003 VLLSLTEVSSRERGLMEVVQDVVNAAEQITGAERVCLFFVDDQANELW--VARSIEFDDAKVKIGHGICGTAAATGEVMNVVNSYENPHFDPSFDKQTGFRTKSVLCVPIPPPEHGTHGPTPTNAVGGAVGGVRPGENPDRIVG 1428 +LL + + ER L +++ ++ + A+R LF +D + E+W +A+ +E + + +G GI GT TGEV+N+ ++Y + F+P FDK+TGFRT+S+LCVP+ N GG +G ++ D + G Sbjct: 15 ILLKVGVRLTAERDLERLLRMIIEETTAVMDADRSSLFLIDGEKGEMWAKIAQGVEVVEIRFPLGKGIAGTVGKTGEVINIPDAYADSRFNPEFDKKTGFRTRSILCVPM------------KNMSGGTIGAIQVLNKKDGLFG 146
BLAST of mRNA_D-mesarthrocarpus_Contig974.2.1 vs. uniprot
Match: UPI001A09239F (GAF domain-containing protein n=1 Tax=Synechococcales cyanobacterium T60_A2020_003 TaxID=2774349 RepID=UPI001A09239F) HSP 1 Score: 92.0 bits (227), Expect = 7.410e-16 Identity = 44/119 (36.97%), Postives = 73/119 (61.34%), Query Frame = 1 Query: 991 RTAEVLLSLTEVSSRERGLMEVVQDVVNAAEQITGAERVCLFFVDDQANELW----VA---RSIEFDDAKVKIGHGICGTAAATGEVMNVVNSYENPHFDPSFDKQTGFRTKSVLCVPI 1326 R AE LL T ++ L + V++ A + A+R LF +D + NELW VA S+E + ++ + GI G A+TG+ +N+ N+YE+P FDP+ D++TG+RT+++LC+P+ Sbjct: 215 RGAEALLKATSCLAQSLDLERTLGVVMDEARDLMNADRSTLFLIDREKNELWSKVAVADGQNSLEIREIRLSVTRGIAGYVASTGQTLNIPNAYEDPRFDPTVDRETGYRTRNILCMPV 333 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig974.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig974.2.1 >prot_D-mesarthrocarpus_Contig974.2.1 ID=prot_D-mesarthrocarpus_Contig974.2.1|Name=mRNA_D-mesarthrocarpus_Contig974.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=463bp MHKKRGLTTSVRDSNGGACPLRCSDGPSSCPLTMDQLSSLLDGSMQGSIGback to top mRNA from alignment at D-mesarthrocarpus_Contig974:1479..3541- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig974.2.1 ID=mRNA_D-mesarthrocarpus_Contig974.2.1|Name=mRNA_D-mesarthrocarpus_Contig974.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2063bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig974:1479..3541- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig974:1479..3541- >mRNA_D-mesarthrocarpus_Contig974.2.1 ID=mRNA_D-mesarthrocarpus_Contig974.2.1|Name=mRNA_D-mesarthrocarpus_Contig974.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1389bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig974:1479..3541- (Discosporangium mesarthrocarpum MT17_79)back to top |